Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.16□□□□□ -1.9
CCDC38Q502W7 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC38Q502W7 AP001324.2-201ENST00000461163 319 ntBASIC3.16□□□□□ -1.9
CCDC38Q502W7 MTCYBP40-201ENST00000509390 1135 ntBASIC3.16□□□□□ -1.9
CCDC38Q502W7 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC38Q502W7 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.16□□□□□ -1.9
CCDC38Q502W7 BTF3P12-201ENST00000519620 469 ntBASIC3.16□□□□□ -1.9
CCDC38Q502W7 AC087854.1-201ENST00000519706 414 ntBASIC3.16□□□□□ -1.9
CCDC38Q502W7 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.16□□□□□ -1.9
CCDC38Q502W7 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.16□□□□□ -1.9
CCDC38Q502W7 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC38Q502W7 MIR5195-201ENST00000583555 115 ntBASIC3.16□□□□□ -1.9
CCDC38Q502W7 AC023043.3-201ENST00000593113 385 ntBASIC3.16□□□□□ -1.9
CCDC38Q502W7 BNIP3P25-201ENST00000596023 559 ntBASIC3.16□□□□□ -1.9
CCDC38Q502W7 RNU6-85P-201ENST00000605989 107 ntBASIC3.16□□□□□ -1.9
CCDC38Q502W7 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.16□□□□□ -1.9
CCDC38Q502W7 AL020991.1-201ENST00000612314 373 ntBASIC3.16□□□□□ -1.9
CCDC38Q502W7 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.16□□□□□ -1.9
CCDC38Q502W7 AL109809.4-201ENST00000603520 2185 ntBASIC3.16□□□□□ -1.9
CCDC38Q502W7 AC009487.2-201ENST00000420969 6821 ntBASIC3.16□□□□□ -1.9
CCDC38Q502W7 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.16□□□□□ -1.9
CCDC38Q502W7 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.16□□□□□ -1.9
CCDC38Q502W7 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
CCDC38Q502W7 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
CCDC38Q502W7 Y_RNA.100-201ENST00000363141 102 ntBASIC3.15□□□□□ -1.91
CCDC38Q502W7 RNU6-487P-201ENST00000365430 104 ntBASIC3.15□□□□□ -1.91
CCDC38Q502W7 Y_RNA.373-201ENST00000365600 103 ntBASIC3.15□□□□□ -1.91
CCDC38Q502W7 RNA5SP274-201ENST00000410484 108 ntBASIC3.15□□□□□ -1.91
CCDC38Q502W7 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC38Q502W7 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC38Q502W7 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC38Q502W7 MRPS10P2-201ENST00000431226 381 ntBASIC3.15□□□□□ -1.91
CCDC38Q502W7 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.15□□□□□ -1.91
CCDC38Q502W7 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC38Q502W7 NFU1P2-201ENST00000448700 469 ntBASIC3.15□□□□□ -1.91
CCDC38Q502W7 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CCDC38Q502W7 RN7SL863P-201ENST00000462370 296 ntBASIC3.15□□□□□ -1.91
CCDC38Q502W7 AC083904.1-201ENST00000487828 231 ntBASIC3.15□□□□□ -1.91
CCDC38Q502W7 MTCYBP18-201ENST00000501056 747 ntBASIC3.15□□□□□ -1.91
CCDC38Q502W7 AC110794.1-201ENST00000505816 425 ntBASIC3.15□□□□□ -1.91
CCDC38Q502W7 SNORA74D-201ENST00000516404 141 ntBASIC3.15□□□□□ -1.91
CCDC38Q502W7 COPS8P3-201ENST00000526024 482 ntBASIC3.15□□□□□ -1.91
CCDC38Q502W7 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC38Q502W7 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC38Q502W7 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC38Q502W7 OR1M4P-201ENST00000589199 287 ntBASIC3.15□□□□□ -1.91
CCDC38Q502W7 AL137843.1-201ENST00000605078 385 ntBASIC3.15□□□□□ -1.91
CCDC38Q502W7 AL160281.1-201ENST00000605307 311 ntBASIC3.15□□□□□ -1.91
CCDC38Q502W7 AC068944.2-201ENST00000610373 403 ntBASIC3.15□□□□□ -1.91
CCDC38Q502W7 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC38Q502W7 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC38Q502W7 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
CCDC38Q502W7 AL359854.1-201ENST00000614203 1594 ntBASIC3.14□□□□□ -1.91
CCDC38Q502W7 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC38Q502W7 RNA5SP267-201ENST00000364893 126 ntBASIC3.14□□□□□ -1.91
CCDC38Q502W7 MIR181B1-201ENST00000385240 110 ntBASIC3.14□□□□□ -1.91
CCDC38Q502W7 SNORD67-201ENST00000390833 111 ntBASIC3.14□□□□□ -1.91
CCDC38Q502W7 RN7SKP220-201ENST00000410611 288 ntBASIC3.14□□□□□ -1.91
CCDC38Q502W7 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.14□□□□□ -1.91
CCDC38Q502W7 AC074117.2-201ENST00000417130 397 ntBASIC3.14□□□□□ -1.91
CCDC38Q502W7 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.14□□□□□ -1.91
CCDC38Q502W7 FABP5P14-201ENST00000437273 393 ntBASIC3.14□□□□□ -1.91
CCDC38Q502W7 Z96811.1-201ENST00000445880 108 ntBASIC3.14□□□□□ -1.91
CCDC38Q502W7 BX510359.1-201ENST00000456973 237 ntBASIC3.14□□□□□ -1.91
CCDC38Q502W7 RN7SL20P-201ENST00000488827 297 ntBASIC3.14□□□□□ -1.91
CCDC38Q502W7 RNU6-377P-201ENST00000515965 102 ntBASIC3.14□□□□□ -1.91
CCDC38Q502W7 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC38Q502W7 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC38Q502W7 AL133241.1-201ENST00000556832 487 ntBASIC3.14□□□□□ -1.91
CCDC38Q502W7 UBL5P2-201ENST00000583788 219 ntBASIC3.14□□□□□ -1.91
CCDC38Q502W7 MIR5692C1-201ENST00000585309 91 ntBASIC3.14□□□□□ -1.91
CCDC38Q502W7 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC38Q502W7 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC38Q502W7 AC021646.1-201ENST00000605469 484 ntBASIC3.14□□□□□ -1.91
CCDC38Q502W7 AL357078.3-201ENST00000607528 618 ntBASIC3.14□□□□□ -1.91
CCDC38Q502W7 AL121757.2-201ENST00000611223 313 ntBASIC3.14□□□□□ -1.91
CCDC38Q502W7 MIR7112-201ENST00000616126 65 ntBASIC3.14□□□□□ -1.91
CCDC38Q502W7 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC38Q502W7 AC026241.1-201ENST00000517873 2142 ntBASIC3.14□□□□□ -1.91
CCDC38Q502W7 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.13□□□□□ -1.91
CCDC38Q502W7 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC38Q502W7 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.13□□□□□ -1.91
CCDC38Q502W7 SNORA9-201ENST00000384215 133 ntBASIC3.13□□□□□ -1.91
CCDC38Q502W7 Y_RNA.530-201ENST00000384587 101 ntBASIC3.13□□□□□ -1.91
CCDC38Q502W7 U3.19-201ENST00000390893 196 ntBASIC3.13□□□□□ -1.91
CCDC38Q502W7 RPL21P75-201ENST00000396599 483 ntBASIC3.13□□□□□ -1.91
CCDC38Q502W7 RPL21P28-201ENST00000401418 483 ntBASIC3.13□□□□□ -1.91
CCDC38Q502W7 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC38Q502W7 USP9YP20-201ENST00000419224 558 ntBASIC3.13□□□□□ -1.91
CCDC38Q502W7 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC38Q502W7 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC38Q502W7 AL139415.2-201ENST00000431968 163 ntBASIC3.13□□□□□ -1.91
CCDC38Q502W7 NDUFA5P4-201ENST00000436704 385 ntBASIC3.13□□□□□ -1.91
CCDC38Q502W7 RPS15AP7-201ENST00000439294 405 ntBASIC3.13□□□□□ -1.91
CCDC38Q502W7 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC38Q502W7 AC007547.1-201ENST00000462177 490 ntBASIC3.13□□□□□ -1.91
CCDC38Q502W7 RPL21P39-201ENST00000463605 483 ntBASIC3.13□□□□□ -1.91
CCDC38Q502W7 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC38Q502W7 RPL7P43-201ENST00000478876 753 ntBASIC3.13□□□□□ -1.91
CCDC38Q502W7 AC087190.1-201ENST00000484462 480 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms