Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 RN7SKP256-201ENST00000517201 314 ntBASIC0.49□□□□□ -2.33
CCDC58Q4VC31 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.49□□□□□ -2.33
CCDC58Q4VC31 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.49□□□□□ -2.33
CCDC58Q4VC31 AC016727.1-205ENST00000605437 569 ntBASIC0.49□□□□□ -2.33
CCDC58Q4VC31 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
CCDC58Q4VC31 AL589994.2-201ENST00000621124 579 ntBASIC0.49□□□□□ -2.33
CCDC58Q4VC31 AC019226.1-201ENST00000625666 515 ntBASIC0.49□□□□□ -2.33
CCDC58Q4VC31 MIR6767-201ENST00000637302 66 ntBASIC0.49□□□□□ -2.33
CCDC58Q4VC31 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
CCDC58Q4VC31 DLEU2_6.3-201ENST00000340052 136 ntBASIC0.48□□□□□ -2.33
CCDC58Q4VC31 RNU6-1010P-201ENST00000362757 107 ntBASIC0.48□□□□□ -2.33
CCDC58Q4VC31 SNORD114-27-201ENST00000363766 70 ntBASIC0.48□□□□□ -2.33
CCDC58Q4VC31 RNU6-944P-201ENST00000364023 107 ntBASIC0.48□□□□□ -2.33
CCDC58Q4VC31 SNORD114-24-201ENST00000365029 72 ntBASIC0.48□□□□□ -2.33
CCDC58Q4VC31 AP000275.1-201ENST00000411943 390 ntBASIC0.48□□□□□ -2.33
CCDC58Q4VC31 RPS26P5-201ENST00000418544 335 ntBASIC0.48□□□□□ -2.33
CCDC58Q4VC31 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC0.48□□□□□ -2.33
CCDC58Q4VC31 AL139421.1-201ENST00000423010 169 ntBASIC0.48□□□□□ -2.33
CCDC58Q4VC31 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC0.48□□□□□ -2.33
CCDC58Q4VC31 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC0.48□□□□□ -2.33
CCDC58Q4VC31 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.48□□□□□ -2.33
CCDC58Q4VC31 RNA5SP121-201ENST00000516537 101 ntBASIC0.48□□□□□ -2.33
CCDC58Q4VC31 AC090142.3-201ENST00000519012 385 ntBASIC0.48□□□□□ -2.33
CCDC58Q4VC31 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.48□□□□□ -2.33
CCDC58Q4VC31 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.48□□□□□ -2.33
CCDC58Q4VC31 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.48□□□□□ -2.33
CCDC58Q4VC31 BNIP3P10-201ENST00000605360 577 ntBASIC0.48□□□□□ -2.33
CCDC58Q4VC31 TUG1_2.1-201ENST00000614234 87 ntBASIC0.48□□□□□ -2.33
CCDC58Q4VC31 AC084824.4-201ENST00000620106 731 ntBASIC0.48□□□□□ -2.33
CCDC58Q4VC31 DLEU2_6.2-201ENST00000620994 136 ntBASIC0.48□□□□□ -2.33
CCDC58Q4VC31 U6.99-201ENST00000637524 83 ntBASIC0.48□□□□□ -2.33
CCDC58Q4VC31 MIR508-201ENST00000384857 115 ntBASIC0.47□□□□□ -2.33
CCDC58Q4VC31 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.47□□□□□ -2.33
CCDC58Q4VC31 RNU6-1300P-201ENST00000391046 108 ntBASIC0.47□□□□□ -2.33
CCDC58Q4VC31 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.47□□□□□ -2.33
CCDC58Q4VC31 AC010099.3-201ENST00000423896 409 ntBASIC0.47□□□□□ -2.33
CCDC58Q4VC31 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC0.47□□□□□ -2.33
CCDC58Q4VC31 TIMM9P1-201ENST00000436122 256 ntBASIC0.47□□□□□ -2.33
CCDC58Q4VC31 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.47□□□□□ -2.33
CCDC58Q4VC31 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC0.47□□□□□ -2.33
CCDC58Q4VC31 AC020550.1-201ENST00000447385 163 ntBASIC0.47□□□□□ -2.33
CCDC58Q4VC31 MTND1P18-201ENST00000448191 573 ntBASIC0.47□□□□□ -2.33
CCDC58Q4VC31 TOMM22P6-201ENST00000465035 409 ntBASIC0.47□□□□□ -2.33
CCDC58Q4VC31 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC0.47□□□□□ -2.33
CCDC58Q4VC31 RNA5SP503-201ENST00000517047 117 ntBASIC0.47□□□□□ -2.33
CCDC58Q4VC31 AC004812.1-201ENST00000540773 146 ntBASIC0.47□□□□□ -2.33
CCDC58Q4VC31 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.47□□□□□ -2.33
CCDC58Q4VC31 MIR5094-201ENST00000578766 85 ntBASIC0.47□□□□□ -2.33
CCDC58Q4VC31 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.47□□□□□ -2.33
CCDC58Q4VC31 AL390208.1-201ENST00000605885 644 ntBASIC0.47□□□□□ -2.33
CCDC58Q4VC31 AC009229.3-201ENST00000608056 282 ntBASIC0.47□□□□□ -2.33
CCDC58Q4VC31 AC018926.1-201ENST00000616335 435 ntBASIC0.47□□□□□ -2.33
CCDC58Q4VC31 AC006213.5-201ENST00000619673 288 ntBASIC0.47□□□□□ -2.33
CCDC58Q4VC31 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.47□□□□□ -2.33
CCDC58Q4VC31 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
CCDC58Q4VC31 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
CCDC58Q4VC31 RNU6-492P-201ENST00000363035 104 ntBASIC0.46□□□□□ -2.34
CCDC58Q4VC31 Y_RNA.234-201ENST00000364409 97 ntBASIC0.46□□□□□ -2.34
CCDC58Q4VC31 MIR23A-201ENST00000385245 73 ntBASIC0.46□□□□□ -2.34
CCDC58Q4VC31 RNU6-796P-201ENST00000391086 107 ntBASIC0.46□□□□□ -2.34
CCDC58Q4VC31 RNU6-754P-201ENST00000391166 107 ntBASIC0.46□□□□□ -2.34
CCDC58Q4VC31 AL590084.2-201ENST00000401481 382 ntBASIC0.46□□□□□ -2.34
CCDC58Q4VC31 EBAG9P1-201ENST00000418955 543 ntBASIC0.46□□□□□ -2.34
CCDC58Q4VC31 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.46□□□□□ -2.34
CCDC58Q4VC31 GTF2IP3-201ENST00000433887 494 ntBASIC0.46□□□□□ -2.34
CCDC58Q4VC31 RNA5SP269-201ENST00000459032 137 ntBASIC0.46□□□□□ -2.34
CCDC58Q4VC31 MTND1P16-201ENST00000465177 898 ntBASIC0.46□□□□□ -2.34
CCDC58Q4VC31 RNU6-991P-201ENST00000516168 107 ntBASIC0.46□□□□□ -2.34
CCDC58Q4VC31 AC022861.1-201ENST00000522981 663 ntBASIC0.46□□□□□ -2.34
CCDC58Q4VC31 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC0.46□□□□□ -2.34
CCDC58Q4VC31 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.46□□□□□ -2.34
CCDC58Q4VC31 AL353997.4-201ENST00000586196 166 ntBASIC0.46□□□□□ -2.34
CCDC58Q4VC31 AC105129.3-201ENST00000605455 485 ntBASIC0.46□□□□□ -2.34
CCDC58Q4VC31 AL365434.2-201ENST00000607979 234 ntBASIC0.46□□□□□ -2.34
CCDC58Q4VC31 AC009268.2-201ENST00000621925 457 ntBASIC0.46□□□□□ -2.34
CCDC58Q4VC31 AC093648.1-201ENST00000623546 606 ntBASIC0.46□□□□□ -2.34
CCDC58Q4VC31 RNU6-28P-201ENST00000362378 107 ntBASIC0.45□□□□□ -2.34
CCDC58Q4VC31 MIR548B-201ENST00000385247 97 ntBASIC0.45□□□□□ -2.34
CCDC58Q4VC31 AC138623.1-201ENST00000418060 216 ntBASIC0.45□□□□□ -2.34
CCDC58Q4VC31 AC083875.1-201ENST00000419509 405 ntBASIC0.45□□□□□ -2.34
CCDC58Q4VC31 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.45□□□□□ -2.34
CCDC58Q4VC31 TPTE2P1-204ENST00000435256 593 ntBASIC0.45□□□□□ -2.34
CCDC58Q4VC31 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.45□□□□□ -2.34
CCDC58Q4VC31 snoU13.8-201ENST00000458890 104 ntBASIC0.45□□□□□ -2.34
CCDC58Q4VC31 RPL37P6-201ENST00000460682 294 ntBASIC0.45□□□□□ -2.34
CCDC58Q4VC31 COX6CP6-201ENST00000490840 228 ntBASIC0.45□□□□□ -2.34
CCDC58Q4VC31 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.45□□□□□ -2.34
CCDC58Q4VC31 AC110760.3-202ENST00000515177 371 ntBASIC0.45□□□□□ -2.34
CCDC58Q4VC31 RNU4-54P-201ENST00000516428 129 ntBASIC0.45□□□□□ -2.34
CCDC58Q4VC31 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.45□□□□□ -2.34
CCDC58Q4VC31 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
CCDC58Q4VC31 EIF1AXP2-201ENST00000555940 413 ntBASIC0.45□□□□□ -2.34
CCDC58Q4VC31 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.45□□□□□ -2.34
CCDC58Q4VC31 AC133485.1-201ENST00000567176 124 ntBASIC0.45□□□□□ -2.34
CCDC58Q4VC31 AC138907.6-201ENST00000568401 126 ntBASIC0.45□□□□□ -2.34
CCDC58Q4VC31 MIR3664-201ENST00000579074 99 ntBASIC0.45□□□□□ -2.34
CCDC58Q4VC31 MIR4524B-201ENST00000581569 115 ntBASIC0.45□□□□□ -2.34
CCDC58Q4VC31 AF038458.1-201ENST00000588406 262 ntBASIC0.45□□□□□ -2.34
CCDC58Q4VC31 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.45□□□□□ -2.34
CCDC58Q4VC31 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 197.1 ms