Protein–RNA interactions for Protein: Q13698

CACNA1S, Voltage-dependent L-type calcium channel subunit alpha-1S, humanhuman

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1SQ13698 RNA5SP112-201ENST00000515937 99 ntBASIC1.4□□□□□ -2.19
CACNA1SQ13698 RNU6-113P-201ENST00000516653 101 ntBASIC1.4□□□□□ -2.19
CACNA1SQ13698 SCARNA1-201ENST00000517138 166 ntBASIC1.4□□□□□ -2.19
CACNA1SQ13698 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.4□□□□□ -2.19
CACNA1SQ13698 MRPS36P5-201ENST00000551909 298 ntBASIC1.4□□□□□ -2.19
CACNA1SQ13698 AL157871.3-201ENST00000557231 293 ntBASIC1.4□□□□□ -2.19
CACNA1SQ13698 MIR5000-201ENST00000577717 103 ntBASIC1.4□□□□□ -2.19
CACNA1SQ13698 AC005730.3-201ENST00000583067 366 ntBASIC1.4□□□□□ -2.19
CACNA1SQ13698 AC131235.4-201ENST00000609288 620 ntBASIC1.4□□□□□ -2.19
CACNA1SQ13698 AL773524.1-201ENST00000614065 229 ntBASIC1.4□□□□□ -2.19
CACNA1SQ13698 AC068700.1-201ENST00000565862 3754 ntBASIC1.39□□□□□ -2.19
CACNA1SQ13698 MIR518D-201ENST00000385014 87 ntBASIC1.39□□□□□ -2.19
CACNA1SQ13698 AC106883.1-201ENST00000418805 562 ntBASIC1.39□□□□□ -2.19
CACNA1SQ13698 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.39□□□□□ -2.19
CACNA1SQ13698 MTND2P29-201ENST00000438595 412 ntBASIC1.39□□□□□ -2.19
CACNA1SQ13698 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.39□□□□□ -2.19
CACNA1SQ13698 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.39□□□□□ -2.19
CACNA1SQ13698 AHI1-208ENST00000488690 712 ntTSL 5 BASIC1.39□□□□□ -2.19
CACNA1SQ13698 MRPS33P3-201ENST00000513456 322 ntBASIC1.39□□□□□ -2.19
CACNA1SQ13698 SNORA31.6-201ENST00000516241 130 ntBASIC1.39□□□□□ -2.19
CACNA1SQ13698 RNA5SP384-201ENST00000516615 116 ntBASIC1.39□□□□□ -2.19
CACNA1SQ13698 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.39□□□□□ -2.19
CACNA1SQ13698 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.39□□□□□ -2.19
CACNA1SQ13698 AC016727.2-201ENST00000603988 621 ntBASIC1.39□□□□□ -2.19
CACNA1SQ13698 AL021997.1-201ENST00000605757 193 ntBASIC1.39□□□□□ -2.19
CACNA1SQ13698 AL365204.3-201ENST00000612448 685 ntBASIC1.39□□□□□ -2.19
CACNA1SQ13698 AC090970.3-201ENST00000612566 866 ntBASIC1.39□□□□□ -2.19
CACNA1SQ13698 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.39□□□□□ -2.19
CACNA1SQ13698 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.39□□□□□ -2.19
CACNA1SQ13698 RNU4-38P-201ENST00000364472 129 ntBASIC1.39□□□□□ -2.19
CACNA1SQ13698 FTH1P15-201ENST00000406984 280 ntBASIC1.39□□□□□ -2.19
CACNA1SQ13698 RPS20P15-201ENST00000412792 311 ntBASIC1.39□□□□□ -2.19
CACNA1SQ13698 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.39□□□□□ -2.19
CACNA1SQ13698 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.39□□□□□ -2.19
CACNA1SQ13698 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.39□□□□□ -2.19
CACNA1SQ13698 SKA2P1-201ENST00000425592 390 ntBASIC1.39□□□□□ -2.19
CACNA1SQ13698 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC1.39□□□□□ -2.19
CACNA1SQ13698 AL627311.1-201ENST00000431514 115 ntBASIC1.39□□□□□ -2.19
CACNA1SQ13698 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC1.39□□□□□ -2.19
CACNA1SQ13698 DYNLL1P5-201ENST00000467158 270 ntBASIC1.39□□□□□ -2.19
CACNA1SQ13698 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.39□□□□□ -2.19
CACNA1SQ13698 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC1.39□□□□□ -2.19
CACNA1SQ13698 MIR449C-201ENST00000516047 92 ntBASIC1.39□□□□□ -2.19
CACNA1SQ13698 RNU6-201P-201ENST00000517100 61 ntBASIC1.39□□□□□ -2.19
CACNA1SQ13698 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.39□□□□□ -2.19
CACNA1SQ13698 AC018645.2-201ENST00000609151 472 ntBASIC1.39□□□□□ -2.19
CACNA1SQ13698 TUG1_2.1-201ENST00000614234 87 ntBASIC1.39□□□□□ -2.19
CACNA1SQ13698 AC024581.2-201ENST00000619986 252 ntBASIC1.39□□□□□ -2.19
CACNA1SQ13698 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.39□□□□□ -2.19
CACNA1SQ13698 TEX21P-201ENST00000447107 1476 ntBASIC1.38□□□□□ -2.19
CACNA1SQ13698 RNU4-92P-201ENST00000363783 136 ntBASIC1.38□□□□□ -2.19
CACNA1SQ13698 SNORA23-201ENST00000365128 182 ntBASIC1.38□□□□□ -2.19
CACNA1SQ13698 SMIM11P1-201ENST00000369586 178 ntBASIC1.38□□□□□ -2.19
CACNA1SQ13698 RNU6-166P-201ENST00000384371 107 ntBASIC1.38□□□□□ -2.19
CACNA1SQ13698 AL355143.1-201ENST00000407101 841 ntBASIC1.38□□□□□ -2.19
CACNA1SQ13698 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.38□□□□□ -2.19
CACNA1SQ13698 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.38□□□□□ -2.19
CACNA1SQ13698 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC1.38□□□□□ -2.19
CACNA1SQ13698 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.38□□□□□ -2.19
CACNA1SQ13698 HMGN2P10-201ENST00000448085 265 ntBASIC1.38□□□□□ -2.19
CACNA1SQ13698 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.38□□□□□ -2.19
CACNA1SQ13698 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.38□□□□□ -2.19
CACNA1SQ13698 AC018437.1-201ENST00000492214 406 ntBASIC1.38□□□□□ -2.19
CACNA1SQ13698 RNU6-150P-201ENST00000516237 95 ntBASIC1.38□□□□□ -2.19
CACNA1SQ13698 PCMTD1P2-201ENST00000565017 355 ntBASIC1.38□□□□□ -2.19
CACNA1SQ13698 AC136618.2-201ENST00000575091 400 ntBASIC1.38□□□□□ -2.19
CACNA1SQ13698 MIR544B-201ENST00000582372 78 ntBASIC1.38□□□□□ -2.19
CACNA1SQ13698 AC005014.3-201ENST00000605985 190 ntBASIC1.38□□□□□ -2.19
CACNA1SQ13698 AC099842.1-201ENST00000619919 596 ntBASIC1.38□□□□□ -2.19
CACNA1SQ13698 AL445984.1-201ENST00000637834 659 ntBASIC1.38□□□□□ -2.19
CACNA1SQ13698 RNY3P13-201ENST00000365542 102 ntBASIC1.37□□□□□ -2.19
CACNA1SQ13698 RNU6-898P-201ENST00000365627 104 ntBASIC1.37□□□□□ -2.19
CACNA1SQ13698 RNA5SP212-201ENST00000391223 107 ntBASIC1.37□□□□□ -2.19
CACNA1SQ13698 AL359634.1-202ENST00000404721 284 ntBASIC1.37□□□□□ -2.19
CACNA1SQ13698 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.37□□□□□ -2.19
CACNA1SQ13698 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC1.37□□□□□ -2.19
CACNA1SQ13698 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.37□□□□□ -2.19
CACNA1SQ13698 AL121601.2-201ENST00000438019 707 ntBASIC1.37□□□□□ -2.19
CACNA1SQ13698 FABP5P15-201ENST00000453566 214 ntBASIC1.37□□□□□ -2.19
CACNA1SQ13698 AC093899.1-201ENST00000457984 376 ntBASIC1.37□□□□□ -2.19
CACNA1SQ13698 AC006512.1-201ENST00000468816 291 ntBASIC1.37□□□□□ -2.19
CACNA1SQ13698 RNU2-10P-201ENST00000516375 211 ntBASIC1.37□□□□□ -2.19
CACNA1SQ13698 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.37□□□□□ -2.19
CACNA1SQ13698 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.37□□□□□ -2.19
CACNA1SQ13698 AC012213.3-201ENST00000577199 777 ntBASIC1.37□□□□□ -2.19
CACNA1SQ13698 AC112187.2-201ENST00000604345 283 ntBASIC1.37□□□□□ -2.19
CACNA1SQ13698 AL022154.1-201ENST00000604698 785 ntBASIC1.37□□□□□ -2.19
CACNA1SQ13698 AC087045.1-201ENST00000605856 382 ntBASIC1.37□□□□□ -2.19
CACNA1SQ13698 Z75746.1-201ENST00000440243 2080 ntBASIC1.37□□□□□ -2.19
CACNA1SQ13698 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.37□□□□□ -2.19
CACNA1SQ13698 RNU6-621P-201ENST00000364752 109 ntBASIC1.37□□□□□ -2.19
CACNA1SQ13698 RNU6-622P-201ENST00000384272 103 ntBASIC1.37□□□□□ -2.19
CACNA1SQ13698 MIR676-201ENST00000390702 67 ntBASIC1.37□□□□□ -2.19
CACNA1SQ13698 SNORD115.1-201ENST00000391109 76 ntBASIC1.37□□□□□ -2.19
CACNA1SQ13698 RNU1-139P-201ENST00000391307 165 ntBASIC1.37□□□□□ -2.19
CACNA1SQ13698 RNU4-22P-201ENST00000411058 166 ntBASIC1.37□□□□□ -2.19
CACNA1SQ13698 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.37□□□□□ -2.19
CACNA1SQ13698 AL022400.1-201ENST00000423946 935 ntBASIC1.37□□□□□ -2.19
CACNA1SQ13698 RPL36AP53-201ENST00000432891 316 ntBASIC1.37□□□□□ -2.19
CACNA1SQ13698 USP9YP25-201ENST00000457708 443 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms