| NPRL3 | Q12980 | MTCO1P19-201 | ENST00000443487 | 500 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | KCNQ5-IT1-201 | ENST00000445310 | 563 nt | TSL 2 BASIC | 2.29 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AC016751.1-201 | ENST00000458254 | 306 nt | TSL 3 BASIC | 2.29 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AC099520.1-202 | ENST00000503650 | 777 nt | TSL 3 BASIC | 2.29 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | GTF2H2C-212 | ENST00000512736 | 832 nt | TSL 1 (best) BASIC | 2.29 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AC008700.1-202 | ENST00000513657 | 468 nt | TSL 5 BASIC | 2.29 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | RNA5SP82-201 | ENST00000516707 | 92 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | RNU6-430P-201 | ENST00000517078 | 107 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | SNORA31.23-201 | ENST00000517219 | 133 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | MTCO2P4-201 | ENST00000517968 | 247 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AC022695.3-201 | ENST00000523385 | 478 nt | TSL 3 BASIC | 2.29 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AC021698.1-201 | ENST00000524858 | 716 nt | TSL 3 BASIC | 2.29 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AL356057.1-201 | ENST00000533798 | 831 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AC243972.3-201 | ENST00000539655 | 198 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | LINC02461-201 | ENST00000553211 | 836 nt | TSL 3 BASIC | 2.29 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AC012594.1-269 | ENST00000600489 | 628 nt | TSL 5 BASIC | 2.29 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | Z84480.1-201 | ENST00000605131 | 311 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | DLEU2_1.1-201 | ENST00000612089 | 120 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | DLEU2_1.2-201 | ENST00000614667 | 120 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | DAOA-AS1_2.1-201 | ENST00000614829 | 187 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | RMST_4.1-201 | ENST00000616886 | 107 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AL136360.1-201 | ENST00000503377 | 1900 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | OR2L2-203 | ENST00000642011 | 4225 nt | APPRIS P1 BASIC | 2.28 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | ZMYM1-201 | ENST00000359858 | 4175 nt | APPRIS P1 TSL 1 (best) BASIC | 2.28 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AL390237.1-201 | ENST00000404226 | 1415 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | RNU6-1287P-201 | ENST00000362914 | 107 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | SNORA62.1-201 | ENST00000364287 | 154 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | SNORD116-9-201 | ENST00000384000 | 95 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | SNORD116-3-201 | ENST00000384287 | 95 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | SNORD116-7-201 | ENST00000384404 | 95 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | SNORD116-5-201 | ENST00000384462 | 95 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | RNU6-1060P-201 | ENST00000384664 | 107 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | EDDM3CP-201 | ENST00000415977 | 425 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AC074117.2-201 | ENST00000417130 | 397 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AIMP1P2-201 | ENST00000425294 | 312 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AC000111.3-201 | ENST00000433478 | 193 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | MTCO2P16-201 | ENST00000436962 | 677 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | HMGB1P31-201 | ENST00000437242 | 427 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AC132479.1-201 | ENST00000449160 | 144 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | C1DP4-201 | ENST00000455429 | 424 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | RPS3P1-201 | ENST00000456781 | 192 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | RPL31P3-201 | ENST00000458430 | 332 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AP001025.1-201 | ENST00000486139 | 332 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AC004052.1-202 | ENST00000505680 | 516 nt | TSL 3 BASIC | 2.28 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | LNX1-AS1-203 | ENST00000511989 | 488 nt | TSL 2 BASIC | 2.28 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | SNORA31.11-201 | ENST00000516528 | 139 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | RNU6-586P-201 | ENST00000517265 | 104 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AC113145.1-201 | ENST00000522408 | 412 nt | TSL 5 BASIC | 2.28 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AC087241.2-201 | ENST00000535801 | 324 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AP000462.3-201 | ENST00000545593 | 330 nt | TSL 5 BASIC | 2.28 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | BNIP3P6-201 | ENST00000549284 | 499 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AC009135.1-201 | ENST00000549303 | 776 nt | TSL 2 BASIC | 2.28 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AC090897.2-201 | ENST00000581715 | 130 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | ZNF280D-204 | ENST00000558320 | 3666 nt | TSL 1 (best) BASIC | 2.28 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AGTPBP1-205 | ENST00000376083 | 4208 nt | APPRIS P1 TSL 1 (best) BASIC | 2.28 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | CEP57L1-203 | ENST00000368970 | 1680 nt | APPRIS ALT2 TSL 5 BASIC | 2.28 | □□□□□ -2.05 | | |
| NPRL3 | Q12980 | LCORL-202 | ENST00000382224 | 4984 nt | APPRIS ALT2 TSL 5 BASIC | 2.28 | □□□□□ -2.05 | | |
| NPRL3 | Q12980 | SNORA25B-201 | ENST00000365507 | 128 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| NPRL3 | Q12980 | RNU6-1032P-201 | ENST00000384100 | 107 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| NPRL3 | Q12980 | SNORA41-201 | ENST00000384675 | 132 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| NPRL3 | Q12980 | MORN2-203 | ENST00000409131 | 544 nt | TSL 5 BASIC | 2.27 | □□□□□ -2.05 | | |
| NPRL3 | Q12980 | AC104462.1-201 | ENST00000414565 | 447 nt | TSL 2 BASIC | 2.27 | □□□□□ -2.05 | | |
| NPRL3 | Q12980 | AL356134.1-201 | ENST00000419815 | 373 nt | TSL 3 BASIC | 2.27 | □□□□□ -2.05 | | |
| NPRL3 | Q12980 | AC007285.2-201 | ENST00000433088 | 518 nt | TSL 3 BASIC | 2.27 | □□□□□ -2.05 | | |
| NPRL3 | Q12980 | AC005019.2-201 | ENST00000434321 | 359 nt | TSL 5 BASIC | 2.27 | □□□□□ -2.05 | | |
| NPRL3 | Q12980 | MTND4P32-201 | ENST00000437189 | 1237 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| NPRL3 | Q12980 | AC092802.2-202 | ENST00000444665 | 371 nt | TSL 5 BASIC | 2.27 | □□□□□ -2.05 | | |
| NPRL3 | Q12980 | AC108938.1-201 | ENST00000451204 | 136 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| NPRL3 | Q12980 | AL109933.2-201 | ENST00000452651 | 260 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| NPRL3 | Q12980 | RNU7-182P-201 | ENST00000459009 | 62 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| NPRL3 | Q12980 | AC010424.1-201 | ENST00000506336 | 297 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| NPRL3 | Q12980 | MTND3P25-201 | ENST00000509243 | 135 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| NPRL3 | Q12980 | AC005920.2-201 | ENST00000509833 | 332 nt | TSL 3 BASIC | 2.27 | □□□□□ -2.05 | | |
| NPRL3 | Q12980 | LINC01256-201 | ENST00000513270 | 508 nt | TSL 2 BASIC | 2.27 | □□□□□ -2.05 | | |
| NPRL3 | Q12980 | AC087664.2-201 | ENST00000522898 | 551 nt | TSL 4 BASIC | 2.27 | □□□□□ -2.05 | | |
| NPRL3 | Q12980 | TAS2R43-201 | ENST00000531678 | 1027 nt | APPRIS P1 BASIC | 2.27 | □□□□□ -2.05 | | |
| NPRL3 | Q12980 | UBE2Q2P8-201 | ENST00000560644 | 102 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| NPRL3 | Q12980 | AC093249.1-201 | ENST00000567049 | 203 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| NPRL3 | Q12980 | AC022960.1-201 | ENST00000582269 | 348 nt | TSL 3 BASIC | 2.27 | □□□□□ -2.05 | | |
| NPRL3 | Q12980 | AC068790.2-201 | ENST00000602601 | 557 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| NPRL3 | Q12980 | AC006023.1-201 | ENST00000603944 | 259 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| NPRL3 | Q12980 | LINC02112-205 | ENST00000606744 | 236 nt | TSL 1 (best) BASIC | 2.27 | □□□□□ -2.05 | | |
| NPRL3 | Q12980 | AC009509.4-201 | ENST00000619202 | 509 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| NPRL3 | Q12980 | AC009161.2-201 | ENST00000624626 | 138 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| NPRL3 | Q12980 | AL353651.2-201 | ENST00000635706 | 559 nt | TSL 5 BASIC | 2.27 | □□□□□ -2.05 | | |
| NPRL3 | Q12980 | CFHR4-204 | ENST00000608469 | 1601 nt | TSL 1 (best) BASIC | 2.27 | □□□□□ -2.05 | | |
| NPRL3 | Q12980 | OGN-201 | ENST00000262551 | 2971 nt | APPRIS P1 TSL 5 BASIC | 2.26 | □□□□□ -2.05 | | |
| NPRL3 | Q12980 | RGPD1-204 | ENST00000559485 | 5247 nt | APPRIS P2 TSL 1 (best) BASIC | 2.26 | □□□□□ -2.05 | | |
| NPRL3 | Q12980 | MIR21-201 | ENST00000362134 | 72 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| NPRL3 | Q12980 | RNU6-529P-201 | ENST00000363383 | 104 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| NPRL3 | Q12980 | RNU4-48P-201 | ENST00000365559 | 182 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| NPRL3 | Q12980 | SNORD116-1-201 | ENST00000384335 | 95 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| NPRL3 | Q12980 | RNU6-456P-201 | ENST00000384493 | 107 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| NPRL3 | Q12980 | Y_RNA.510-201 | ENST00000384511 | 114 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| NPRL3 | Q12980 | CTNNA2-204 | ENST00000409266 | 432 nt | TSL 3 BASIC | 2.26 | □□□□□ -2.05 | | |
| NPRL3 | Q12980 | RNU2-23P-201 | ENST00000410545 | 195 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| NPRL3 | Q12980 | RNU6-607P-201 | ENST00000411283 | 108 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| NPRL3 | Q12980 | OR9R1P-201 | ENST00000412200 | 877 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| NPRL3 | Q12980 | LINC00368-201 | ENST00000422994 | 650 nt | TSL 1 (best) BASIC | 2.26 | □□□□□ -2.05 | | |
| NPRL3 | Q12980 | AL353612.1-201 | ENST00000428769 | 465 nt | TSL 3 BASIC | 2.26 | □□□□□ -2.05 | | |