Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 RNA5SP240-201ENST00000365355 128 ntBASIC1.98□□□□□ -2.09
RAB40BQ12829 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.98□□□□□ -2.09
RAB40BQ12829 PIGFP2-201ENST00000421400 651 ntBASIC1.98□□□□□ -2.09
RAB40BQ12829 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.98□□□□□ -2.09
RAB40BQ12829 HMGB1P31-201ENST00000437242 427 ntBASIC1.98□□□□□ -2.09
RAB40BQ12829 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.98□□□□□ -2.09
RAB40BQ12829 AC124916.1-201ENST00000444020 547 ntBASIC1.98□□□□□ -2.09
RAB40BQ12829 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.98□□□□□ -2.09
RAB40BQ12829 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.98□□□□□ -2.09
RAB40BQ12829 AC079448.1-201ENST00000449377 373 ntBASIC1.98□□□□□ -2.09
RAB40BQ12829 RPS29P15-201ENST00000458329 171 ntBASIC1.98□□□□□ -2.09
RAB40BQ12829 RNU7-182P-201ENST00000459009 62 ntBASIC1.98□□□□□ -2.09
RAB40BQ12829 RNU6-717P-201ENST00000459076 104 ntBASIC1.98□□□□□ -2.09
RAB40BQ12829 AC117503.1-201ENST00000472241 394 ntBASIC1.98□□□□□ -2.09
RAB40BQ12829 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.98□□□□□ -2.09
RAB40BQ12829 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.98□□□□□ -2.09
RAB40BQ12829 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.98□□□□□ -2.09
RAB40BQ12829 MTND3P25-201ENST00000509243 135 ntBASIC1.98□□□□□ -2.09
RAB40BQ12829 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.98□□□□□ -2.09
RAB40BQ12829 RNU1-40P-201ENST00000516816 164 ntBASIC1.98□□□□□ -2.09
RAB40BQ12829 RNU1-97P-201ENST00000516872 164 ntBASIC1.98□□□□□ -2.09
RAB40BQ12829 RNA5SP503-201ENST00000517047 117 ntBASIC1.98□□□□□ -2.09
RAB40BQ12829 RPL7P20-201ENST00000520308 745 ntBASIC1.98□□□□□ -2.09
RAB40BQ12829 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.98□□□□□ -2.09
RAB40BQ12829 CR383656.8-201ENST00000549046 145 ntBASIC1.98□□□□□ -2.09
RAB40BQ12829 MIR3913-1-201ENST00000577744 102 ntBASIC1.98□□□□□ -2.09
RAB40BQ12829 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.98□□□□□ -2.09
RAB40BQ12829 AC046143.2-201ENST00000609789 160 ntBASIC1.98□□□□□ -2.09
RAB40BQ12829 MIR6895-201ENST00000613497 78 ntBASIC1.98□□□□□ -2.09
RAB40BQ12829 AL158063.1-201ENST00000615349 536 ntBASIC1.98□□□□□ -2.09
RAB40BQ12829 AP000553.5-201ENST00000641933 54 ntBASIC1.98□□□□□ -2.09
RAB40BQ12829 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
RAB40BQ12829 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
RAB40BQ12829 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
RAB40BQ12829 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.97□□□□□ -2.09
RAB40BQ12829 RNU6-1010P-201ENST00000362757 107 ntBASIC1.97□□□□□ -2.09
RAB40BQ12829 RNU1-91P-201ENST00000364746 163 ntBASIC1.97□□□□□ -2.09
RAB40BQ12829 RNU6-487P-201ENST00000365430 104 ntBASIC1.97□□□□□ -2.09
RAB40BQ12829 SNORA51.11-201ENST00000384442 131 ntBASIC1.97□□□□□ -2.09
RAB40BQ12829 RNU1-57P-201ENST00000384491 166 ntBASIC1.97□□□□□ -2.09
RAB40BQ12829 SNORA67.4-201ENST00000384688 142 ntBASIC1.97□□□□□ -2.09
RAB40BQ12829 RAP1BP3-201ENST00000407180 549 ntBASIC1.97□□□□□ -2.09
RAB40BQ12829 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.97□□□□□ -2.09
RAB40BQ12829 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.97□□□□□ -2.09
RAB40BQ12829 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.97□□□□□ -2.09
RAB40BQ12829 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.97□□□□□ -2.09
RAB40BQ12829 MTATP6P17-201ENST00000431030 672 ntBASIC1.97□□□□□ -2.09
RAB40BQ12829 AL161788.1-201ENST00000441805 169 ntBASIC1.97□□□□□ -2.09
RAB40BQ12829 AC022364.2-201ENST00000457963 554 ntBASIC1.97□□□□□ -2.09
RAB40BQ12829 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.97□□□□□ -2.09
RAB40BQ12829 RNA5SP200-201ENST00000516360 103 ntBASIC1.97□□□□□ -2.09
RAB40BQ12829 SNORA43.2-201ENST00000516652 128 ntBASIC1.97□□□□□ -2.09
RAB40BQ12829 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.97□□□□□ -2.09
RAB40BQ12829 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.97□□□□□ -2.09
RAB40BQ12829 AL138976.2-201ENST00000563989 694 ntBASIC1.97□□□□□ -2.09
RAB40BQ12829 AC009127.3-201ENST00000570531 403 ntBASIC1.97□□□□□ -2.09
RAB40BQ12829 MIR4775-201ENST00000581168 75 ntBASIC1.97□□□□□ -2.09
RAB40BQ12829 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.97□□□□□ -2.09
RAB40BQ12829 MIR5002-201ENST00000584713 97 ntBASIC1.97□□□□□ -2.09
RAB40BQ12829 RPL30P11-203ENST00000598995 310 ntBASIC1.97□□□□□ -2.09
RAB40BQ12829 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.97□□□□□ -2.09
RAB40BQ12829 AL713866.2-201ENST00000603579 219 ntBASIC1.97□□□□□ -2.09
RAB40BQ12829 AC109347.2-201ENST00000610220 349 ntBASIC1.97□□□□□ -2.09
RAB40BQ12829 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.97□□□□□ -2.09
RAB40BQ12829 MIR6817-201ENST00000615588 66 ntBASIC1.97□□□□□ -2.09
RAB40BQ12829 RMST_4.1-201ENST00000616886 107 ntBASIC1.97□□□□□ -2.09
RAB40BQ12829 AC008147.4-201ENST00000617570 1204 ntBASIC1.97□□□□□ -2.09
RAB40BQ12829 AC072046.2-201ENST00000618366 268 ntBASIC1.97□□□□□ -2.09
RAB40BQ12829 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.97□□□□□ -2.09
RAB40BQ12829 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.97□□□□□ -2.09
RAB40BQ12829 MIR203B-201ENST00000636080 86 ntBASIC1.97□□□□□ -2.09
RAB40BQ12829 AL390237.1-201ENST00000404226 1415 ntBASIC1.97□□□□□ -2.09
RAB40BQ12829 RNU6-181P-201ENST00000363225 107 ntBASIC1.96□□□□□ -2.1
RAB40BQ12829 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.96□□□□□ -2.1
RAB40BQ12829 RNU6-1029P-201ENST00000384109 107 ntBASIC1.96□□□□□ -2.1
RAB40BQ12829 RNU6-45P-201ENST00000384471 107 ntBASIC1.96□□□□□ -2.1
RAB40BQ12829 RNU1-148P-201ENST00000384472 162 ntBASIC1.96□□□□□ -2.1
RAB40BQ12829 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.96□□□□□ -2.1
RAB40BQ12829 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.96□□□□□ -2.1
RAB40BQ12829 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.96□□□□□ -2.1
RAB40BQ12829 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.96□□□□□ -2.1
RAB40BQ12829 AC008267.5-201ENST00000424928 265 ntBASIC1.96□□□□□ -2.1
RAB40BQ12829 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.96□□□□□ -2.1
RAB40BQ12829 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.96□□□□□ -2.1
RAB40BQ12829 MTND2P4-201ENST00000445034 1004 ntBASIC1.96□□□□□ -2.1
RAB40BQ12829 AC098826.2-201ENST00000452011 651 ntBASIC1.96□□□□□ -2.1
RAB40BQ12829 SNORA59A-201ENST00000459326 152 ntBASIC1.96□□□□□ -2.1
RAB40BQ12829 UBE2DNL-203ENST00000474922 222 ntBASIC1.96□□□□□ -2.1
RAB40BQ12829 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
RAB40BQ12829 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.96□□□□□ -2.1
RAB40BQ12829 RNU4-29P-201ENST00000515943 174 ntBASIC1.96□□□□□ -2.1
RAB40BQ12829 RNU6-1178P-201ENST00000516674 107 ntBASIC1.96□□□□□ -2.1
RAB40BQ12829 RNU6-445P-201ENST00000516949 107 ntBASIC1.96□□□□□ -2.1
RAB40BQ12829 SNORA31.23-201ENST00000517219 133 ntBASIC1.96□□□□□ -2.1
RAB40BQ12829 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.96□□□□□ -2.1
RAB40BQ12829 IGLV3-17-201ENST00000519099 244 ntBASIC1.96□□□□□ -2.1
RAB40BQ12829 AP000889.1-201ENST00000530968 660 ntBASIC1.96□□□□□ -2.1
RAB40BQ12829 BNIP3P6-201ENST00000549284 499 ntBASIC1.96□□□□□ -2.1
RAB40BQ12829 AC121758.2-201ENST00000553271 193 ntBASIC1.96□□□□□ -2.1
RAB40BQ12829 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 130.6 ms