Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC125238.1-201ENST00000448842 249 ntBASIC4.22□□□□□ -1.73
PCDH1Q08174 RPS29P33-201ENST00000456717 146 ntBASIC4.22□□□□□ -1.73
PCDH1Q08174 Y_RNA.650-201ENST00000459002 102 ntBASIC4.22□□□□□ -1.73
PCDH1Q08174 AC091959.1-201ENST00000495857 238 ntBASIC4.22□□□□□ -1.73
PCDH1Q08174 AC006499.6-201ENST00000511169 607 ntBASIC4.22□□□□□ -1.73
PCDH1Q08174 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.22□□□□□ -1.73
PCDH1Q08174 RNU6-1198P-201ENST00000516904 67 ntBASIC4.22□□□□□ -1.73
PCDH1Q08174 Y_RNA.777-201ENST00000516982 102 ntBASIC4.22□□□□□ -1.73
PCDH1Q08174 RNU6-58P-201ENST00000517143 103 ntBASIC4.22□□□□□ -1.73
PCDH1Q08174 IGLV3-26-201ENST00000520756 302 ntBASIC4.22□□□□□ -1.73
PCDH1Q08174 Y_RNA.771-201ENST00000598668 102 ntBASIC4.22□□□□□ -1.73
PCDH1Q08174 AC012468.1-201ENST00000604888 430 ntBASIC4.22□□□□□ -1.73
PCDH1Q08174 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.22□□□□□ -1.73
PCDH1Q08174 MIR378J-201ENST00000611988 109 ntBASIC4.22□□□□□ -1.73
PCDH1Q08174 Y_RNA.789-201ENST00000622480 102 ntBASIC4.22□□□□□ -1.73
PCDH1Q08174 AC021753.1-201ENST00000635724 168 ntBASIC4.22□□□□□ -1.73
PCDH1Q08174 IGHVIII-44-202ENST00000636235 289 ntBASIC4.22□□□□□ -1.73
PCDH1Q08174 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PCDH1Q08174 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.22□□□□□ -1.73
PCDH1Q08174 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
PCDH1Q08174 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
PCDH1Q08174 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
PCDH1Q08174 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
PCDH1Q08174 AC022336.2-201ENST00000568966 2538 ntBASIC4.21□□□□□ -1.74
PCDH1Q08174 MIR410-201ENST00000362222 80 ntBASIC4.21□□□□□ -1.74
PCDH1Q08174 RNU6-884P-201ENST00000363889 107 ntBASIC4.21□□□□□ -1.74
PCDH1Q08174 Y_RNA.230-201ENST00000364348 109 ntBASIC4.21□□□□□ -1.74
PCDH1Q08174 RNU6-1145P-201ENST00000384246 107 ntBASIC4.21□□□□□ -1.74
PCDH1Q08174 MIR487A-201ENST00000385009 80 ntBASIC4.21□□□□□ -1.74
PCDH1Q08174 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.21□□□□□ -1.74
PCDH1Q08174 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDH1Q08174 AL353748.1-201ENST00000440753 474 ntBASIC4.21□□□□□ -1.74
PCDH1Q08174 GPM6BP3-201ENST00000442797 145 ntBASIC4.21□□□□□ -1.74
PCDH1Q08174 HMGB3P8-201ENST00000449709 577 ntBASIC4.21□□□□□ -1.74
PCDH1Q08174 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDH1Q08174 RPL23AP81-201ENST00000455252 467 ntBASIC4.21□□□□□ -1.74
PCDH1Q08174 Y_RNA.638-201ENST00000459374 113 ntBASIC4.21□□□□□ -1.74
PCDH1Q08174 SNRPGP7-201ENST00000469016 106 ntBASIC4.21□□□□□ -1.74
PCDH1Q08174 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
PCDH1Q08174 Y_RNA.662-201ENST00000516028 97 ntBASIC4.21□□□□□ -1.74
PCDH1Q08174 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.21□□□□□ -1.74
PCDH1Q08174 HSPE1P4-201ENST00000550617 308 ntBASIC4.21□□□□□ -1.74
PCDH1Q08174 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.21□□□□□ -1.74
PCDH1Q08174 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.21□□□□□ -1.74
PCDH1Q08174 MIR4284-201ENST00000578924 81 ntBASIC4.21□□□□□ -1.74
PCDH1Q08174 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.21□□□□□ -1.74
PCDH1Q08174 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.21□□□□□ -1.74
PCDH1Q08174 AC008749.1-201ENST00000597650 306 ntBASIC4.21□□□□□ -1.74
PCDH1Q08174 AL021997.2-201ENST00000615674 271 ntBASIC4.21□□□□□ -1.74
PCDH1Q08174 AL590240.4-201ENST00000616908 390 ntBASIC4.21□□□□□ -1.74
PCDH1Q08174 uc_338.13-201ENST00000618243 179 ntBASIC4.21□□□□□ -1.74
PCDH1Q08174 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.21□□□□□ -1.74
PCDH1Q08174 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
PCDH1Q08174 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
PCDH1Q08174 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
PCDH1Q08174 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
PCDH1Q08174 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.21□□□□□ -1.74
PCDH1Q08174 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PCDH1Q08174 AC135776.4-201ENST00000624300 1904 ntBASIC4.21□□□□□ -1.74
PCDH1Q08174 AC010733.2-201ENST00000589496 5702 ntBASIC4.2□□□□□ -1.74
PCDH1Q08174 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
PCDH1Q08174 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDH1Q08174 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
PCDH1Q08174 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDH1Q08174 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.2□□□□□ -1.74
PCDH1Q08174 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDH1Q08174 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDH1Q08174 UBE2WP1-201ENST00000362030 340 ntBASIC4.2□□□□□ -1.74
PCDH1Q08174 Y_RNA.170-201ENST00000363746 110 ntBASIC4.2□□□□□ -1.74
PCDH1Q08174 RNU6-961P-201ENST00000363893 105 ntBASIC4.2□□□□□ -1.74
PCDH1Q08174 RN7SKP280-201ENST00000364196 304 ntBASIC4.2□□□□□ -1.74
PCDH1Q08174 RNU6-1141P-201ENST00000364520 107 ntBASIC4.2□□□□□ -1.74
PCDH1Q08174 RNU6-1175P-201ENST00000365200 107 ntBASIC4.2□□□□□ -1.74
PCDH1Q08174 RNA5SP240-201ENST00000365355 128 ntBASIC4.2□□□□□ -1.74
PCDH1Q08174 Y_RNA.418-201ENST00000384029 102 ntBASIC4.2□□□□□ -1.74
PCDH1Q08174 Y_RNA.446-201ENST00000384178 104 ntBASIC4.2□□□□□ -1.74
PCDH1Q08174 MIR544A-201ENST00000384855 91 ntBASIC4.2□□□□□ -1.74
PCDH1Q08174 MIR607-201ENST00000385241 96 ntBASIC4.2□□□□□ -1.74
PCDH1Q08174 MIR888-201ENST00000401186 77 ntBASIC4.2□□□□□ -1.74
PCDH1Q08174 RPL19P1-201ENST00000411635 428 ntBASIC4.2□□□□□ -1.74
PCDH1Q08174 RPS20P14-201ENST00000412545 360 ntBASIC4.2□□□□□ -1.74
PCDH1Q08174 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.2□□□□□ -1.74
PCDH1Q08174 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.2□□□□□ -1.74
PCDH1Q08174 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC4.2□□□□□ -1.74
PCDH1Q08174 NUTF2P3-201ENST00000448540 384 ntBASIC4.2□□□□□ -1.74
PCDH1Q08174 TPT1P12-201ENST00000448968 492 ntBASIC4.2□□□□□ -1.74
PCDH1Q08174 RPS4XP22-201ENST00000480755 780 ntBASIC4.2□□□□□ -1.74
PCDH1Q08174 AC016632.1-201ENST00000503994 196 ntBASIC4.2□□□□□ -1.74
PCDH1Q08174 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC4.2□□□□□ -1.74
PCDH1Q08174 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PCDH1Q08174 AL391261.3-201ENST00000557194 520 ntBASIC4.2□□□□□ -1.74
PCDH1Q08174 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC4.2□□□□□ -1.74
PCDH1Q08174 MZT1P2-201ENST00000604387 248 ntBASIC4.2□□□□□ -1.74
PCDH1Q08174 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.2□□□□□ -1.74
PCDH1Q08174 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
PCDH1Q08174 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
PCDH1Q08174 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
PCDH1Q08174 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDH1Q08174 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
PCDH1Q08174 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 147.5 ms