Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.28□□□□□ -1.72
SOX4Q06945 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
SOX4Q06945 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.73
SOX4Q06945 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SOX4Q06945 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SOX4Q06945 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SOX4Q06945 SNORD115-32-201ENST00000364079 82 ntBASIC4.27□□□□□ -1.73
SOX4Q06945 RNU6-1035P-201ENST00000384477 107 ntBASIC4.27□□□□□ -1.73
SOX4Q06945 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SOX4Q06945 RNA5SP213-201ENST00000391031 106 ntBASIC4.27□□□□□ -1.73
SOX4Q06945 UBA52P6-201ENST00000399822 382 ntBASIC4.27□□□□□ -1.73
SOX4Q06945 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.27□□□□□ -1.73
SOX4Q06945 AC098614.2-201ENST00000426040 255 ntBASIC4.27□□□□□ -1.73
SOX4Q06945 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SOX4Q06945 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.27□□□□□ -1.73
SOX4Q06945 RN7SL585P-201ENST00000470538 280 ntBASIC4.27□□□□□ -1.73
SOX4Q06945 RPS26P28-201ENST00000470806 348 ntBASIC4.27□□□□□ -1.73
SOX4Q06945 KC877373.1-201ENST00000479066 408 ntBASIC4.27□□□□□ -1.73
SOX4Q06945 RPL30P1-201ENST00000488676 339 ntBASIC4.27□□□□□ -1.73
SOX4Q06945 AC025554.1-201ENST00000505641 188 ntBASIC4.27□□□□□ -1.73
SOX4Q06945 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.27□□□□□ -1.73
SOX4Q06945 AP004371.1-201ENST00000525240 214 ntBASIC4.27□□□□□ -1.73
SOX4Q06945 AK6P2-201ENST00000549020 471 ntBASIC4.27□□□□□ -1.73
SOX4Q06945 AC027288.2-201ENST00000553028 243 ntBASIC4.27□□□□□ -1.73
SOX4Q06945 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.27□□□□□ -1.73
SOX4Q06945 MIR4423-201ENST00000580922 80 ntBASIC4.27□□□□□ -1.73
SOX4Q06945 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.27□□□□□ -1.73
SOX4Q06945 AC090132.2-201ENST00000615881 347 ntBASIC4.27□□□□□ -1.73
SOX4Q06945 AC027309.3-201ENST00000623419 351 ntBASIC4.27□□□□□ -1.73
SOX4Q06945 SCARNA4-202ENST00000625402 129 ntBASIC4.27□□□□□ -1.73
SOX4Q06945 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.27□□□□□ -1.73
SOX4Q06945 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SOX4Q06945 BX322639.1-202ENST00000423987 2213 ntBASIC4.27□□□□□ -1.73
SOX4Q06945 AC087190.4-201ENST00000574616 8334 ntBASIC4.27□□□□□ -1.73
SOX4Q06945 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
SOX4Q06945 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SOX4Q06945 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
SOX4Q06945 AL359693.1-201ENST00000614959 2407 ntBASIC4.26□□□□□ -1.73
SOX4Q06945 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC4.26□□□□□ -1.73
SOX4Q06945 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
SOX4Q06945 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SOX4Q06945 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.26□□□□□ -1.73
SOX4Q06945 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.26□□□□□ -1.73
SOX4Q06945 RNA5SP361-201ENST00000362686 118 ntBASIC4.26□□□□□ -1.73
SOX4Q06945 Y_RNA.82-201ENST00000363000 102 ntBASIC4.26□□□□□ -1.73
SOX4Q06945 Y_RNA.92-201ENST00000363043 102 ntBASIC4.26□□□□□ -1.73
SOX4Q06945 RNU6-527P-201ENST00000363425 104 ntBASIC4.26□□□□□ -1.73
SOX4Q06945 Y_RNA.235-201ENST00000364412 102 ntBASIC4.26□□□□□ -1.73
SOX4Q06945 SNORD50B-201ENST00000364995 70 ntBASIC4.26□□□□□ -1.73
SOX4Q06945 Y_RNA.306-201ENST00000365015 102 ntBASIC4.26□□□□□ -1.73
SOX4Q06945 Y_RNA.312-201ENST00000365089 102 ntBASIC4.26□□□□□ -1.73
SOX4Q06945 Y_RNA.322-201ENST00000365151 102 ntBASIC4.26□□□□□ -1.73
SOX4Q06945 RNU6-1286P-201ENST00000383871 107 ntBASIC4.26□□□□□ -1.73
SOX4Q06945 Y_RNA.418-201ENST00000384029 102 ntBASIC4.26□□□□□ -1.73
SOX4Q06945 RNU6-514P-201ENST00000384208 107 ntBASIC4.26□□□□□ -1.73
SOX4Q06945 RNU1-139P-201ENST00000391307 165 ntBASIC4.26□□□□□ -1.73
SOX4Q06945 RNU2-68P-201ENST00000410878 191 ntBASIC4.26□□□□□ -1.73
SOX4Q06945 AC244098.2-201ENST00000422068 99 ntBASIC4.26□□□□□ -1.73
SOX4Q06945 Y_RNA.650-201ENST00000459002 102 ntBASIC4.26□□□□□ -1.73
SOX4Q06945 AP001324.2-201ENST00000461163 319 ntBASIC4.26□□□□□ -1.73
SOX4Q06945 AC073901.1-201ENST00000462471 408 ntBASIC4.26□□□□□ -1.73
SOX4Q06945 S100A11P1-201ENST00000477525 312 ntBASIC4.26□□□□□ -1.73
SOX4Q06945 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.26□□□□□ -1.73
SOX4Q06945 Y_RNA.777-201ENST00000516982 102 ntBASIC4.26□□□□□ -1.73
SOX4Q06945 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.26□□□□□ -1.73
SOX4Q06945 MIR4782-201ENST00000577987 79 ntBASIC4.26□□□□□ -1.73
SOX4Q06945 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.26□□□□□ -1.73
SOX4Q06945 AC005255.1-201ENST00000593748 216 ntBASIC4.26□□□□□ -1.73
SOX4Q06945 Y_RNA.771-201ENST00000598668 102 ntBASIC4.26□□□□□ -1.73
SOX4Q06945 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SOX4Q06945 Y_RNA.789-201ENST00000622480 102 ntBASIC4.26□□□□□ -1.73
SOX4Q06945 AC241585.2-209ENST00000638217 143 ntBASIC4.26□□□□□ -1.73
SOX4Q06945 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SOX4Q06945 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
SOX4Q06945 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SOX4Q06945 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
SOX4Q06945 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SOX4Q06945 AC007390.2-201ENST00000606229 3803 ntBASIC4.25□□□□□ -1.73
SOX4Q06945 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
SOX4Q06945 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.25□□□□□ -1.73
SOX4Q06945 RNU6-923P-201ENST00000364753 107 ntBASIC4.25□□□□□ -1.73
SOX4Q06945 Y_RNA.398-201ENST00000383952 99 ntBASIC4.25□□□□□ -1.73
SOX4Q06945 MIR30B-201ENST00000384850 88 ntBASIC4.25□□□□□ -1.73
SOX4Q06945 MIR153-2-201ENST00000385225 87 ntBASIC4.25□□□□□ -1.73
SOX4Q06945 RNA5SP146-201ENST00000410743 123 ntBASIC4.25□□□□□ -1.73
SOX4Q06945 RPL27AP8-201ENST00000424277 446 ntBASIC4.25□□□□□ -1.73
SOX4Q06945 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.25□□□□□ -1.73
SOX4Q06945 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC4.25□□□□□ -1.73
SOX4Q06945 NDUFS5P3-201ENST00000450668 321 ntBASIC4.25□□□□□ -1.73
SOX4Q06945 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.25□□□□□ -1.73
SOX4Q06945 PPIAP15-201ENST00000479662 484 ntBASIC4.25□□□□□ -1.73
SOX4Q06945 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC4.25□□□□□ -1.73
SOX4Q06945 RNU6-1114P-201ENST00000516022 107 ntBASIC4.25□□□□□ -1.73
SOX4Q06945 SNORA67.7-201ENST00000516664 135 ntBASIC4.25□□□□□ -1.73
SOX4Q06945 RNA5SP291-201ENST00000517222 105 ntBASIC4.25□□□□□ -1.73
SOX4Q06945 MTND6P33-201ENST00000571794 183 ntBASIC4.25□□□□□ -1.73
SOX4Q06945 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.25□□□□□ -1.73
SOX4Q06945 AL365265.1-201ENST00000621045 234 ntBASIC4.25□□□□□ -1.73
SOX4Q06945 AC039056.2-201ENST00000622261 511 ntBASIC4.25□□□□□ -1.73
SOX4Q06945 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms