Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 XACT-201ENST00000468762 497 ntTSL 5 BASIC0.58□□□□□ -2.32
HIST1H1AQ02539 HMGN2P9-201ENST00000476875 229 ntBASIC0.58□□□□□ -2.32
HIST1H1AQ02539 AC145146.1-201ENST00000496370 254 ntBASIC0.58□□□□□ -2.32
HIST1H1AQ02539 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC0.58□□□□□ -2.32
HIST1H1AQ02539 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC0.58□□□□□ -2.32
HIST1H1AQ02539 AL512310.8-201ENST00000550183 120 ntBASIC0.58□□□□□ -2.32
HIST1H1AQ02539 AC008759.3-201ENST00000613300 508 ntBASIC0.58□□□□□ -2.32
HIST1H1AQ02539 AC093648.1-201ENST00000623546 606 ntBASIC0.58□□□□□ -2.32
HIST1H1AQ02539 AC068205.3-201ENST00000636385 468 ntBASIC0.58□□□□□ -2.32
HIST1H1AQ02539 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
HIST1H1AQ02539 PCF11-AS1-201ENST00000602322 1516 ntBASIC0.58□□□□□ -2.32
HIST1H1AQ02539 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC0.57□□□□□ -2.32
HIST1H1AQ02539 MIR222-201ENST00000384992 110 ntBASIC0.57□□□□□ -2.32
HIST1H1AQ02539 RPL23AP32-201ENST00000395315 459 ntBASIC0.57□□□□□ -2.32
HIST1H1AQ02539 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.57□□□□□ -2.32
HIST1H1AQ02539 RNU6-321P-201ENST00000410912 106 ntBASIC0.57□□□□□ -2.32
HIST1H1AQ02539 AC009518.2-201ENST00000418056 731 ntBASIC0.57□□□□□ -2.32
HIST1H1AQ02539 AC138623.1-201ENST00000418060 216 ntBASIC0.57□□□□□ -2.32
HIST1H1AQ02539 VN1R42P-201ENST00000424651 344 ntBASIC0.57□□□□□ -2.32
HIST1H1AQ02539 C8orf59P1-201ENST00000429930 303 ntBASIC0.57□□□□□ -2.32
HIST1H1AQ02539 TRIM60P13-201ENST00000432350 1283 ntBASIC0.57□□□□□ -2.32
HIST1H1AQ02539 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.57□□□□□ -2.32
HIST1H1AQ02539 MTND5P15-201ENST00000434246 349 ntBASIC0.57□□□□□ -2.32
HIST1H1AQ02539 AL096829.2-201ENST00000446582 742 ntBASIC0.57□□□□□ -2.32
HIST1H1AQ02539 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC0.57□□□□□ -2.32
HIST1H1AQ02539 RNU7-140P-201ENST00000459546 60 ntBASIC0.57□□□□□ -2.32
HIST1H1AQ02539 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.57□□□□□ -2.32
HIST1H1AQ02539 AC136628.3-201ENST00000521868 290 ntBASIC0.57□□□□□ -2.32
HIST1H1AQ02539 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.57□□□□□ -2.32
HIST1H1AQ02539 MIR3973-201ENST00000579824 107 ntBASIC0.57□□□□□ -2.32
HIST1H1AQ02539 MZT1P2-201ENST00000604387 248 ntBASIC0.57□□□□□ -2.32
HIST1H1AQ02539 uc_338.15-201ENST00000615470 191 ntBASIC0.57□□□□□ -2.32
HIST1H1AQ02539 OR4G3P-201ENST00000633500 913 ntBASIC0.57□□□□□ -2.32
HIST1H1AQ02539 SNRPEP3-201ENST00000338402 276 ntBASIC0.56□□□□□ -2.32
HIST1H1AQ02539 Y_RNA.25-201ENST00000362528 102 ntBASIC0.56□□□□□ -2.32
HIST1H1AQ02539 RNU6-188P-201ENST00000364207 107 ntBASIC0.56□□□□□ -2.32
HIST1H1AQ02539 RNU6-549P-201ENST00000384433 107 ntBASIC0.56□□□□□ -2.32
HIST1H1AQ02539 AL139397.2-201ENST00000404529 772 ntBASIC0.56□□□□□ -2.32
HIST1H1AQ02539 AL161935.2-201ENST00000414627 60 ntBASIC0.56□□□□□ -2.32
HIST1H1AQ02539 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC0.56□□□□□ -2.32
HIST1H1AQ02539 EBAG9P1-201ENST00000418955 543 ntBASIC0.56□□□□□ -2.32
HIST1H1AQ02539 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.56□□□□□ -2.32
HIST1H1AQ02539 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC0.56□□□□□ -2.32
HIST1H1AQ02539 HSPE1P13-201ENST00000451143 297 ntBASIC0.56□□□□□ -2.32
HIST1H1AQ02539 AC114981.1-201ENST00000503897 678 ntBASIC0.56□□□□□ -2.32
HIST1H1AQ02539 AC008837.2-201ENST00000513076 418 ntBASIC0.56□□□□□ -2.32
HIST1H1AQ02539 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC0.56□□□□□ -2.32
HIST1H1AQ02539 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.56□□□□□ -2.32
HIST1H1AQ02539 AC004817.2-201ENST00000561794 651 ntBASIC0.56□□□□□ -2.32
HIST1H1AQ02539 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC0.56□□□□□ -2.32
HIST1H1AQ02539 RN7SL622P-201ENST00000585292 275 ntBASIC0.56□□□□□ -2.32
HIST1H1AQ02539 MTCO2P2-201ENST00000591258 225 ntBASIC0.56□□□□□ -2.32
HIST1H1AQ02539 AP003465.2-201ENST00000602571 373 ntBASIC0.56□□□□□ -2.32
HIST1H1AQ02539 AC093788.1-201ENST00000609356 927 ntBASIC0.56□□□□□ -2.32
HIST1H1AQ02539 AC108706.1-201ENST00000611053 297 ntBASIC0.56□□□□□ -2.32
HIST1H1AQ02539 AC009269.6-201ENST00000621778 588 ntBASIC0.56□□□□□ -2.32
HIST1H1AQ02539 RNU6-288P-201ENST00000363690 104 ntBASIC0.55□□□□□ -2.32
HIST1H1AQ02539 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.55□□□□□ -2.32
HIST1H1AQ02539 RNU6-432P-201ENST00000384196 109 ntBASIC0.55□□□□□ -2.32
HIST1H1AQ02539 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.55□□□□□ -2.32
HIST1H1AQ02539 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC0.55□□□□□ -2.32
HIST1H1AQ02539 CALM1P1-201ENST00000442082 433 ntBASIC0.55□□□□□ -2.32
HIST1H1AQ02539 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.55□□□□□ -2.32
HIST1H1AQ02539 BTF3P15-201ENST00000455606 336 ntBASIC0.55□□□□□ -2.32
HIST1H1AQ02539 AC134050.1-201ENST00000495088 933 ntBASIC0.55□□□□□ -2.32
HIST1H1AQ02539 TRBVA-201ENST00000498804 316 ntBASIC0.55□□□□□ -2.32
HIST1H1AQ02539 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.55□□□□□ -2.32
HIST1H1AQ02539 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC0.55□□□□□ -2.32
HIST1H1AQ02539 RNU6-1053P-201ENST00000515930 101 ntBASIC0.55□□□□□ -2.32
HIST1H1AQ02539 SNORA3.4-201ENST00000515969 96 ntBASIC0.55□□□□□ -2.32
HIST1H1AQ02539 RNU6-322P-201ENST00000516010 103 ntBASIC0.55□□□□□ -2.32
HIST1H1AQ02539 AL353997.4-201ENST00000586196 166 ntBASIC0.55□□□□□ -2.32
HIST1H1AQ02539 AC016727.1-205ENST00000605437 569 ntBASIC0.55□□□□□ -2.32
HIST1H1AQ02539 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.55□□□□□ -2.32
HIST1H1AQ02539 AL357080.1-201ENST00000617394 239 ntBASIC0.55□□□□□ -2.32
HIST1H1AQ02539 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.55□□□□□ -2.32
HIST1H1AQ02539 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
HIST1H1AQ02539 RNY1P10-201ENST00000363268 113 ntBASIC0.54□□□□□ -2.32
HIST1H1AQ02539 RNU6-97P-201ENST00000363387 104 ntBASIC0.54□□□□□ -2.32
HIST1H1AQ02539 RNU6-944P-201ENST00000364023 107 ntBASIC0.54□□□□□ -2.32
HIST1H1AQ02539 MIR19B1-201ENST00000384829 87 ntBASIC0.54□□□□□ -2.32
HIST1H1AQ02539 MIR29B2-201ENST00000385055 81 ntBASIC0.54□□□□□ -2.32
HIST1H1AQ02539 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.54□□□□□ -2.32
HIST1H1AQ02539 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC0.54□□□□□ -2.32
HIST1H1AQ02539 SNX2P2-201ENST00000424553 323 ntBASIC0.54□□□□□ -2.32
HIST1H1AQ02539 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.54□□□□□ -2.32
HIST1H1AQ02539 AL669831.1-202ENST00000428504 417 ntBASIC0.54□□□□□ -2.32
HIST1H1AQ02539 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC0.54□□□□□ -2.32
HIST1H1AQ02539 AC117454.1-201ENST00000491120 168 ntBASIC0.54□□□□□ -2.32
HIST1H1AQ02539 RNU6-237P-201ENST00000515985 71 ntBASIC0.54□□□□□ -2.32
HIST1H1AQ02539 RNU6-390P-201ENST00000516259 103 ntBASIC0.54□□□□□ -2.32
HIST1H1AQ02539 RNU6-965P-201ENST00000516721 96 ntBASIC0.54□□□□□ -2.32
HIST1H1AQ02539 RN7SKP88-201ENST00000516847 250 ntBASIC0.54□□□□□ -2.32
HIST1H1AQ02539 RNU6-1092P-201ENST00000516955 87 ntBASIC0.54□□□□□ -2.32
HIST1H1AQ02539 RN7SKP258-201ENST00000517151 304 ntBASIC0.54□□□□□ -2.32
HIST1H1AQ02539 RNU6-1261P-201ENST00000517194 104 ntBASIC0.54□□□□□ -2.32
HIST1H1AQ02539 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.54□□□□□ -2.32
HIST1H1AQ02539 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.54□□□□□ -2.32
HIST1H1AQ02539 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC0.54□□□□□ -2.32
HIST1H1AQ02539 AC008088.1-201ENST00000580993 280 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms