Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 MTCO2P15-201ENST00000532655 656 ntBASIC-0.62□□□□□ -2.51
RPL39P62891 AL391261.3-201ENST00000557194 520 ntBASIC-0.62□□□□□ -2.51
RPL39P62891 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC-0.62□□□□□ -2.51
RPL39P62891 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC-0.62□□□□□ -2.51
RPL39P62891 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC-0.62□□□□□ -2.51
RPL39P62891 AC012557.2-201ENST00000605919 418 ntBASIC-0.62□□□□□ -2.51
RPL39P62891 OR5H6-203ENST00000642105 978 ntBASIC-0.62□□□□□ -2.51
RPL39P62891 AL138713.1-201ENST00000624026 2130 ntBASIC-0.62□□□□□ -2.51
RPL39P62891 SNORD114-5-201ENST00000362928 70 ntBASIC-0.63□□□□□ -2.51
RPL39P62891 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC-0.63□□□□□ -2.51
RPL39P62891 PDCL2P1-201ENST00000419302 352 ntBASIC-0.63□□□□□ -2.51
RPL39P62891 MTCO1P53-201ENST00000441633 699 ntBASIC-0.63□□□□□ -2.51
RPL39P62891 AL161788.1-201ENST00000441805 169 ntBASIC-0.63□□□□□ -2.51
RPL39P62891 AC006199.1-201ENST00000548728 219 ntBASIC-0.63□□□□□ -2.51
RPL39P62891 MIR4765-201ENST00000585007 77 ntBASIC-0.63□□□□□ -2.51
RPL39P62891 AP000403.1-201ENST00000603349 851 ntBASIC-0.63□□□□□ -2.51
RPL39P62891 AC105148.1-201ENST00000604961 409 ntBASIC-0.63□□□□□ -2.51
RPL39P62891 AL360219.1-201ENST00000610230 366 ntBASIC-0.63□□□□□ -2.51
RPL39P62891 AC013470.4-201ENST00000619978 986 ntBASIC-0.63□□□□□ -2.51
RPL39P62891 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC-0.63□□□□□ -2.51
RPL39P62891 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC-0.64□□□□□ -2.51
RPL39P62891 MT-TC-201ENST00000387405 66 ntBASIC-0.64□□□□□ -2.51
RPL39P62891 RNU6-952P-201ENST00000391164 108 ntBASIC-0.64□□□□□ -2.51
RPL39P62891 AC096531.1-201ENST00000419107 107 ntBASIC-0.64□□□□□ -2.51
RPL39P62891 HMGN1P10-201ENST00000474557 553 ntBASIC-0.64□□□□□ -2.51
RPL39P62891 RPF2P2-201ENST00000504693 896 ntBASIC-0.64□□□□□ -2.51
RPL39P62891 RNVU1-2-201ENST00000516326 135 ntBASIC-0.64□□□□□ -2.51
RPL39P62891 RNU6-798P-201ENST00000516912 103 ntBASIC-0.64□□□□□ -2.51
RPL39P62891 RNU6-1092P-201ENST00000516955 87 ntBASIC-0.64□□□□□ -2.51
RPL39P62891 SUMO2P16-201ENST00000519475 264 ntBASIC-0.64□□□□□ -2.51
RPL39P62891 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC-0.64□□□□□ -2.51
RPL39P62891 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC-0.64□□□□□ -2.51
RPL39P62891 RSL24D1P11-201ENST00000591045 491 ntBASIC-0.64□□□□□ -2.51
RPL39P62891 AL513534.2-201ENST00000603836 250 ntBASIC-0.64□□□□□ -2.51
RPL39P62891 AC104408.1-201ENST00000605241 170 ntBASIC-0.64□□□□□ -2.51
RPL39P62891 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC-0.64□□□□□ -2.51
RPL39P62891 AC138749.5-201ENST00000611461 208 ntBASIC-0.64□□□□□ -2.51
RPL39P62891 AC008498.1-201ENST00000613012 531 ntBASIC-0.64□□□□□ -2.51
RPL39P62891 FAS-AS1.2-201ENST00000620386 170 ntBASIC-0.64□□□□□ -2.51
RPL39P62891 RNU6-317P-201ENST00000384031 107 ntBASIC-0.65□□□□□ -2.51
RPL39P62891 RNU6-910P-201ENST00000390844 107 ntBASIC-0.65□□□□□ -2.51
RPL39P62891 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC-0.65□□□□□ -2.51
RPL39P62891 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC-0.65□□□□□ -2.51
RPL39P62891 AC245102.2-201ENST00000448956 180 ntBASIC-0.65□□□□□ -2.51
RPL39P62891 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC-0.65□□□□□ -2.51
RPL39P62891 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC-0.65□□□□□ -2.51
RPL39P62891 WDR78-207ENST00000488333 613 ntTSL 3 BASIC-0.65□□□□□ -2.51
RPL39P62891 BLNK-209ENST00000495266 440 ntTSL 5 BASIC-0.65□□□□□ -2.51
RPL39P62891 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC-0.65□□□□□ -2.51
RPL39P62891 AC104417.1-201ENST00000523974 751 ntBASIC-0.65□□□□□ -2.51
RPL39P62891 ZNF705CP-201ENST00000530515 889 ntBASIC-0.65□□□□□ -2.51
RPL39P62891 VBP1-203ENST00000535916 944 ntTSL 2 BASIC-0.65□□□□□ -2.51
RPL39P62891 AC023157.2-201ENST00000540596 141 ntBASIC-0.65□□□□□ -2.51
RPL39P62891 AC027104.1-201ENST00000563702 681 ntBASIC-0.65□□□□□ -2.51
RPL39P62891 AC005730.3-201ENST00000583067 366 ntBASIC-0.65□□□□□ -2.51
RPL39P62891 AL022345.1-201ENST00000607292 135 ntBASIC-0.65□□□□□ -2.51
RPL39P62891 AC011155.2-201ENST00000623202 216 ntBASIC-0.65□□□□□ -2.51
RPL39P62891 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC-0.65□□□□□ -2.51
RPL39P62891 RNU6-374P-201ENST00000364146 108 ntBASIC-0.66□□□□□ -2.52
RPL39P62891 SNORD99-201ENST00000408612 74 ntBASIC-0.66□□□□□ -2.52
RPL39P62891 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC-0.66□□□□□ -2.52
RPL39P62891 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC-0.66□□□□□ -2.52
RPL39P62891 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC-0.66□□□□□ -2.52
RPL39P62891 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC-0.66□□□□□ -2.52
RPL39P62891 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC-0.66□□□□□ -2.52
RPL39P62891 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC-0.66□□□□□ -2.52
RPL39P62891 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC-0.66□□□□□ -2.52
RPL39P62891 UBE2V1P8-201ENST00000437166 265 ntBASIC-0.66□□□□□ -2.52
RPL39P62891 SNORA31.4-201ENST00000516049 129 ntBASIC-0.66□□□□□ -2.52
RPL39P62891 SNORA40.12-201ENST00000516329 111 ntBASIC-0.66□□□□□ -2.52
RPL39P62891 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC-0.66□□□□□ -2.52
RPL39P62891 AL158211.1-201ENST00000566763 763 ntBASIC-0.66□□□□□ -2.52
RPL39P62891 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC-0.66□□□□□ -2.52
RPL39P62891 DUXAP11-201ENST00000603858 526 ntBASIC-0.66□□□□□ -2.52
RPL39P62891 AL031667.3-201ENST00000620124 655 ntBASIC-0.66□□□□□ -2.52
RPL39P62891 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC-0.67□□□□□ -2.52
RPL39P62891 Y_RNA.355-201ENST00000365462 98 ntBASIC-0.67□□□□□ -2.52
RPL39P62891 RNU6-418P-201ENST00000384035 107 ntBASIC-0.67□□□□□ -2.52
RPL39P62891 TAF9BP2-201ENST00000400856 499 ntBASIC-0.67□□□□□ -2.52
RPL39P62891 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.67□□□□□ -2.52
RPL39P62891 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC-0.67□□□□□ -2.52
RPL39P62891 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC-0.67□□□□□ -2.52
RPL39P62891 MRPS17P3-201ENST00000465453 385 ntBASIC-0.67□□□□□ -2.52
RPL39P62891 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC-0.67□□□□□ -2.52
RPL39P62891 AC116347.2-201ENST00000514912 523 ntBASIC-0.67□□□□□ -2.52
RPL39P62891 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC-0.67□□□□□ -2.52
RPL39P62891 AC023050.2-201ENST00000544968 387 ntBASIC-0.67□□□□□ -2.52
RPL39P62891 AC009032.1-201ENST00000617574 431 ntBASIC-0.67□□□□□ -2.52
RPL39P62891 AC084824.4-201ENST00000620106 731 ntBASIC-0.67□□□□□ -2.52
RPL39P62891 RNU6-173P-201ENST00000364215 104 ntBASIC-0.68□□□□□ -2.52
RPL39P62891 Y_RNA.255-201ENST00000364581 97 ntBASIC-0.68□□□□□ -2.52
RPL39P62891 RNU6-532P-201ENST00000384318 107 ntBASIC-0.68□□□□□ -2.52
RPL39P62891 RNU6-950P-201ENST00000384651 107 ntBASIC-0.68□□□□□ -2.52
RPL39P62891 MIR643-201ENST00000385267 97 ntBASIC-0.68□□□□□ -2.52
RPL39P62891 RNU2-32P-201ENST00000411193 191 ntBASIC-0.68□□□□□ -2.52
RPL39P62891 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.68□□□□□ -2.52
RPL39P62891 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC-0.68□□□□□ -2.52
RPL39P62891 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC-0.68□□□□□ -2.52
RPL39P62891 FTH1P12-201ENST00000432137 551 ntBASIC-0.68□□□□□ -2.52
RPL39P62891 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC-0.68□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 146.9 ms