Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
VSX2P58304 MIR548AB-201ENST00000584917 84 ntBASIC1.74□□□□□ -2.13
VSX2P58304 WISP1-OT1-201ENST00000602893 642 ntBASIC1.74□□□□□ -2.13
VSX2P58304 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.74□□□□□ -2.13
VSX2P58304 AL022154.1-201ENST00000604698 785 ntBASIC1.74□□□□□ -2.13
VSX2P58304 AC087045.1-201ENST00000605856 382 ntBASIC1.74□□□□□ -2.13
VSX2P58304 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.74□□□□□ -2.13
VSX2P58304 MIR7844-201ENST00000616161 122 ntBASIC1.74□□□□□ -2.13
VSX2P58304 MIR5739-201ENST00000619803 80 ntBASIC1.74□□□□□ -2.13
VSX2P58304 AL391262.2-201ENST00000622466 494 ntBASIC1.74□□□□□ -2.13
VSX2P58304 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
VSX2P58304 AC103710.2-202ENST00000641454 2853 ntBASIC1.73□□□□□ -2.13
VSX2P58304 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
VSX2P58304 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
VSX2P58304 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
VSX2P58304 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
VSX2P58304 RNU6-858P-201ENST00000362436 107 ntBASIC1.73□□□□□ -2.13
VSX2P58304 Y_RNA.22-201ENST00000362492 102 ntBASIC1.73□□□□□ -2.13
VSX2P58304 RNU1-23P-201ENST00000363361 144 ntBASIC1.73□□□□□ -2.13
VSX2P58304 MIR578-201ENST00000384828 96 ntBASIC1.73□□□□□ -2.13
VSX2P58304 MIR9-3-201ENST00000385084 90 ntBASIC1.73□□□□□ -2.13
VSX2P58304 CISD1P1-201ENST00000393907 327 ntBASIC1.73□□□□□ -2.13
VSX2P58304 RN7SKP158-201ENST00000410453 326 ntBASIC1.73□□□□□ -2.13
VSX2P58304 Y_RNA.623-201ENST00000411128 95 ntBASIC1.73□□□□□ -2.13
VSX2P58304 XKRYP1-201ENST00000423438 492 ntBASIC1.73□□□□□ -2.13
VSX2P58304 AC010099.3-201ENST00000423896 409 ntBASIC1.73□□□□□ -2.13
VSX2P58304 XKRYP2-201ENST00000432915 492 ntBASIC1.73□□□□□ -2.13
VSX2P58304 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.73□□□□□ -2.13
VSX2P58304 RPL7P34-201ENST00000433316 712 ntBASIC1.73□□□□□ -2.13
VSX2P58304 KATNBL1P6-201ENST00000453433 915 ntBASIC1.73□□□□□ -2.13
VSX2P58304 AL441985.1-201ENST00000457727 251 ntBASIC1.73□□□□□ -2.13
VSX2P58304 RAP1BP2-201ENST00000478270 544 ntBASIC1.73□□□□□ -2.13
VSX2P58304 AC018437.1-201ENST00000492214 406 ntBASIC1.73□□□□□ -2.13
VSX2P58304 RPS29P11-201ENST00000496507 171 ntBASIC1.73□□□□□ -2.13
VSX2P58304 HMGB3P17-201ENST00000504195 649 ntBASIC1.73□□□□□ -2.13
VSX2P58304 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC1.73□□□□□ -2.13
VSX2P58304 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.73□□□□□ -2.13
VSX2P58304 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.73□□□□□ -2.13
VSX2P58304 ZNF321P-202ENST00000550843 495 ntBASIC1.73□□□□□ -2.13
VSX2P58304 AC078899.2-201ENST00000595282 212 ntBASIC1.73□□□□□ -2.13
VSX2P58304 AL022161.1-201ENST00000604390 213 ntBASIC1.73□□□□□ -2.13
VSX2P58304 AC084768.2-201ENST00000622736 221 ntBASIC1.73□□□□□ -2.13
VSX2P58304 RBBP8P1-201ENST00000449447 1844 ntBASIC1.73□□□□□ -2.13
VSX2P58304 RNU6-384P-201ENST00000364900 104 ntBASIC1.72□□□□□ -2.13
VSX2P58304 RNU6-395P-201ENST00000365662 106 ntBASIC1.72□□□□□ -2.13
VSX2P58304 Y_RNA.560-201ENST00000384689 102 ntBASIC1.72□□□□□ -2.13
VSX2P58304 RNA5SP270-201ENST00000411361 118 ntBASIC1.72□□□□□ -2.13
VSX2P58304 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.72□□□□□ -2.13
VSX2P58304 EDDM3CP-201ENST00000415977 425 ntBASIC1.72□□□□□ -2.13
VSX2P58304 CYCSP49-201ENST00000420810 319 ntBASIC1.72□□□□□ -2.13
VSX2P58304 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.72□□□□□ -2.13
VSX2P58304 AC119618.1-201ENST00000434191 222 ntBASIC1.72□□□□□ -2.13
VSX2P58304 AL161788.1-201ENST00000441805 169 ntBASIC1.72□□□□□ -2.13
VSX2P58304 CALM1P1-201ENST00000442082 433 ntBASIC1.72□□□□□ -2.13
VSX2P58304 USP9YP15-201ENST00000442391 422 ntBASIC1.72□□□□□ -2.13
VSX2P58304 USP9YP12-201ENST00000450481 570 ntBASIC1.72□□□□□ -2.13
VSX2P58304 RNU7-125P-201ENST00000458760 62 ntBASIC1.72□□□□□ -2.13
VSX2P58304 AC108078.2-201ENST00000510750 236 ntBASIC1.72□□□□□ -2.13
VSX2P58304 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.72□□□□□ -2.13
VSX2P58304 AC107393.1-201ENST00000512403 346 ntBASIC1.72□□□□□ -2.13
VSX2P58304 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.72□□□□□ -2.13
VSX2P58304 SNORA4.4-201ENST00000515921 135 ntBASIC1.72□□□□□ -2.13
VSX2P58304 RN7SKP219-201ENST00000516825 296 ntBASIC1.72□□□□□ -2.13
VSX2P58304 RNU2-46P-201ENST00000517038 113 ntBASIC1.72□□□□□ -2.13
VSX2P58304 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.72□□□□□ -2.13
VSX2P58304 AC009094.1-201ENST00000564443 426 ntBASIC1.72□□□□□ -2.13
VSX2P58304 MIR4287-201ENST00000579398 78 ntBASIC1.72□□□□□ -2.13
VSX2P58304 AC112191.3-201ENST00000604371 277 ntBASIC1.72□□□□□ -2.13
VSX2P58304 AC018638.7-201ENST00000605836 1114 ntBASIC1.72□□□□□ -2.13
VSX2P58304 AC091304.9-201ENST00000612091 226 ntBASIC1.72□□□□□ -2.13
VSX2P58304 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
VSX2P58304 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
VSX2P58304 AC073343.1-201ENST00000328239 651 ntBASIC1.71□□□□□ -2.14
VSX2P58304 RNU6-371P-201ENST00000364283 108 ntBASIC1.71□□□□□ -2.14
VSX2P58304 MIR95-201ENST00000385072 81 ntBASIC1.71□□□□□ -2.14
VSX2P58304 MIR1294-201ENST00000408503 142 ntBASIC1.71□□□□□ -2.14
VSX2P58304 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.71□□□□□ -2.14
VSX2P58304 AC009518.2-201ENST00000418056 731 ntBASIC1.71□□□□□ -2.14
VSX2P58304 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.71□□□□□ -2.14
VSX2P58304 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.71□□□□□ -2.14
VSX2P58304 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.71□□□□□ -2.14
VSX2P58304 AL603825.1-201ENST00000438481 80 ntBASIC1.71□□□□□ -2.14
VSX2P58304 AC016691.1-201ENST00000441321 413 ntBASIC1.71□□□□□ -2.14
VSX2P58304 UBE2D3P4-201ENST00000441973 436 ntBASIC1.71□□□□□ -2.14
VSX2P58304 TAF9P1-201ENST00000445421 515 ntBASIC1.71□□□□□ -2.14
VSX2P58304 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.71□□□□□ -2.14
VSX2P58304 TAF9P2-201ENST00000454958 515 ntBASIC1.71□□□□□ -2.14
VSX2P58304 PMCHL2-203ENST00000457791 237 ntBASIC1.71□□□□□ -2.14
VSX2P58304 CKS1BP2-201ENST00000497342 240 ntBASIC1.71□□□□□ -2.14
VSX2P58304 AC005178.1-201ENST00000508392 440 ntBASIC1.71□□□□□ -2.14
VSX2P58304 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.71□□□□□ -2.14
VSX2P58304 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.71□□□□□ -2.14
VSX2P58304 SNORA3.4-201ENST00000515969 96 ntBASIC1.71□□□□□ -2.14
VSX2P58304 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.71□□□□□ -2.14
VSX2P58304 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.71□□□□□ -2.14
VSX2P58304 AC107953.1-201ENST00000522216 297 ntBASIC1.71□□□□□ -2.14
VSX2P58304 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.71□□□□□ -2.14
VSX2P58304 AC022616.3-201ENST00000523940 148 ntBASIC1.71□□□□□ -2.14
VSX2P58304 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.71□□□□□ -2.14
VSX2P58304 AC022878.1-201ENST00000530684 149 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 134.5 ms