Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 YWHAEP7-203ENST00000622054 312 ntBASIC2.38□□□□□ -2.03
HMGCS2P54868 AC011155.2-201ENST00000623202 216 ntBASIC2.38□□□□□ -2.03
HMGCS2P54868 Z99571.1-201ENST00000636677 394 ntBASIC2.38□□□□□ -2.03
HMGCS2P54868 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.38□□□□□ -2.03
HMGCS2P54868 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
HMGCS2P54868 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.38□□□□□ -2.03
HMGCS2P54868 MTND4P35-201ENST00000604257 1375 ntBASIC2.37□□□□□ -2.03
HMGCS2P54868 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.37□□□□□ -2.03
HMGCS2P54868 RNU6-1120P-201ENST00000362988 108 ntBASIC2.37□□□□□ -2.03
HMGCS2P54868 RNU6-179P-201ENST00000363350 107 ntBASIC2.37□□□□□ -2.03
HMGCS2P54868 Y_RNA.140-201ENST00000363474 103 ntBASIC2.37□□□□□ -2.03
HMGCS2P54868 SNORA62.1-201ENST00000364287 154 ntBASIC2.37□□□□□ -2.03
HMGCS2P54868 RNU4-48P-201ENST00000365559 182 ntBASIC2.37□□□□□ -2.03
HMGCS2P54868 RNU6-190P-201ENST00000384154 102 ntBASIC2.37□□□□□ -2.03
HMGCS2P54868 RNU2-9P-201ENST00000410194 145 ntBASIC2.37□□□□□ -2.03
HMGCS2P54868 RNU4-55P-201ENST00000410731 137 ntBASIC2.37□□□□□ -2.03
HMGCS2P54868 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.37□□□□□ -2.03
HMGCS2P54868 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.37□□□□□ -2.03
HMGCS2P54868 GTF2IP20-201ENST00000431663 360 ntBASIC2.37□□□□□ -2.03
HMGCS2P54868 AL591704.1-201ENST00000432574 275 ntBASIC2.37□□□□□ -2.03
HMGCS2P54868 MTND1P1-201ENST00000445453 368 ntBASIC2.37□□□□□ -2.03
HMGCS2P54868 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.37□□□□□ -2.03
HMGCS2P54868 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.37□□□□□ -2.03
HMGCS2P54868 RPS29P20-201ENST00000489592 171 ntBASIC2.37□□□□□ -2.03
HMGCS2P54868 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.37□□□□□ -2.03
HMGCS2P54868 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
HMGCS2P54868 AC084851.1-201ENST00000529105 249 ntBASIC2.37□□□□□ -2.03
HMGCS2P54868 AC004486.1-201ENST00000546846 233 ntBASIC2.37□□□□□ -2.03
HMGCS2P54868 AL391261.3-201ENST00000557194 520 ntBASIC2.37□□□□□ -2.03
HMGCS2P54868 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
HMGCS2P54868 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.37□□□□□ -2.03
HMGCS2P54868 MIR3670-2-201ENST00000582974 65 ntBASIC2.37□□□□□ -2.03
HMGCS2P54868 MIR3616-201ENST00000584070 92 ntBASIC2.37□□□□□ -2.03
HMGCS2P54868 MIR3670-1-201ENST00000584160 65 ntBASIC2.37□□□□□ -2.03
HMGCS2P54868 MIR3670-3-201ENST00000584855 65 ntBASIC2.37□□□□□ -2.03
HMGCS2P54868 AF250324.2-201ENST00000608299 610 ntBASIC2.37□□□□□ -2.03
HMGCS2P54868 AC092954.2-201ENST00000609103 430 ntBASIC2.37□□□□□ -2.03
HMGCS2P54868 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.37□□□□□ -2.03
HMGCS2P54868 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
HMGCS2P54868 MIR3670-4-201ENST00000612260 65 ntBASIC2.37□□□□□ -2.03
HMGCS2P54868 AL158209.2-201ENST00000619266 216 ntBASIC2.37□□□□□ -2.03
HMGCS2P54868 AC098679.4-201ENST00000624241 654 ntBASIC2.37□□□□□ -2.03
HMGCS2P54868 AL359740.1-201ENST00000624340 592 ntBASIC2.37□□□□□ -2.03
HMGCS2P54868 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.37□□□□□ -2.03
HMGCS2P54868 AL157786.1-207ENST00000627771 695 ntBASIC2.37□□□□□ -2.03
HMGCS2P54868 MIR6863-201ENST00000636112 90 ntBASIC2.37□□□□□ -2.03
HMGCS2P54868 AC099654.12-201ENST00000639868 649 ntBASIC2.37□□□□□ -2.03
HMGCS2P54868 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
HMGCS2P54868 RNU1-17P-201ENST00000363022 152 ntBASIC2.36□□□□□ -2.03
HMGCS2P54868 RNU6-778P-201ENST00000363269 103 ntBASIC2.36□□□□□ -2.03
HMGCS2P54868 RNU6-884P-201ENST00000363889 107 ntBASIC2.36□□□□□ -2.03
HMGCS2P54868 SNORA68.1-201ENST00000364537 132 ntBASIC2.36□□□□□ -2.03
HMGCS2P54868 Y_RNA.381-201ENST00000365666 102 ntBASIC2.36□□□□□ -2.03
HMGCS2P54868 Y_RNA.409-201ENST00000383990 98 ntBASIC2.36□□□□□ -2.03
HMGCS2P54868 Y_RNA.516-201ENST00000384541 124 ntBASIC2.36□□□□□ -2.03
HMGCS2P54868 RNU6-606P-201ENST00000384721 111 ntBASIC2.36□□□□□ -2.03
HMGCS2P54868 RNU6-1158P-201ENST00000391167 107 ntBASIC2.36□□□□□ -2.03
HMGCS2P54868 AL513475.1-201ENST00000406602 315 ntBASIC2.36□□□□□ -2.03
HMGCS2P54868 HMGN2P35-201ENST00000412164 270 ntBASIC2.36□□□□□ -2.03
HMGCS2P54868 OR51A5P-201ENST00000415429 942 ntBASIC2.36□□□□□ -2.03
HMGCS2P54868 AL096701.2-201ENST00000416920 238 ntBASIC2.36□□□□□ -2.03
HMGCS2P54868 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.36□□□□□ -2.03
HMGCS2P54868 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.36□□□□□ -2.03
HMGCS2P54868 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.36□□□□□ -2.03
HMGCS2P54868 MTCYBP5-201ENST00000423752 1135 ntBASIC2.36□□□□□ -2.03
HMGCS2P54868 CALM2P2-201ENST00000428512 440 ntBASIC2.36□□□□□ -2.03
HMGCS2P54868 FABP5P13-201ENST00000452144 328 ntBASIC2.36□□□□□ -2.03
HMGCS2P54868 AL162395.1-201ENST00000457882 422 ntBASIC2.36□□□□□ -2.03
HMGCS2P54868 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.36□□□□□ -2.03
HMGCS2P54868 AC010493.1-201ENST00000513479 292 ntBASIC2.36□□□□□ -2.03
HMGCS2P54868 AC009902.1-201ENST00000519351 183 ntBASIC2.36□□□□□ -2.03
HMGCS2P54868 OR5AL2P-201ENST00000532185 920 ntBASIC2.36□□□□□ -2.03
HMGCS2P54868 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.36□□□□□ -2.03
HMGCS2P54868 AC090616.3-201ENST00000582184 217 ntBASIC2.36□□□□□ -2.03
HMGCS2P54868 AC008752.3-201ENST00000588113 712 ntBASIC2.36□□□□□ -2.03
HMGCS2P54868 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.36□□□□□ -2.03
HMGCS2P54868 AC146944.4-201ENST00000602697 718 ntBASIC2.36□□□□□ -2.03
HMGCS2P54868 BNIP3P9-201ENST00000603714 553 ntBASIC2.36□□□□□ -2.03
HMGCS2P54868 AP000787.2-201ENST00000604432 568 ntBASIC2.36□□□□□ -2.03
HMGCS2P54868 AL021997.1-201ENST00000605757 193 ntBASIC2.36□□□□□ -2.03
HMGCS2P54868 AC005609.4-201ENST00000625071 447 ntBASIC2.36□□□□□ -2.03
HMGCS2P54868 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
HMGCS2P54868 HSPA8P4-201ENST00000511877 1920 ntBASIC2.35□□□□□ -2.03
HMGCS2P54868 OR4G2P-201ENST00000328113 903 ntBASIC2.35□□□□□ -2.03
HMGCS2P54868 RNU6-461P-201ENST00000364195 107 ntBASIC2.35□□□□□ -2.03
HMGCS2P54868 SNORA75B-201ENST00000384053 137 ntBASIC2.35□□□□□ -2.03
HMGCS2P54868 SNORA40.18-201ENST00000391200 128 ntBASIC2.35□□□□□ -2.03
HMGCS2P54868 MTCO3P40-201ENST00000392516 676 ntBASIC2.35□□□□□ -2.03
HMGCS2P54868 AC019129.1-201ENST00000403786 261 ntBASIC2.35□□□□□ -2.03
HMGCS2P54868 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.35□□□□□ -2.03
HMGCS2P54868 MTCO1P21-201ENST00000416634 589 ntBASIC2.35□□□□□ -2.03
HMGCS2P54868 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.35□□□□□ -2.03
HMGCS2P54868 C8orf59P1-201ENST00000429930 303 ntBASIC2.35□□□□□ -2.03
HMGCS2P54868 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.35□□□□□ -2.03
HMGCS2P54868 RPL36AP53-201ENST00000432891 316 ntBASIC2.35□□□□□ -2.03
HMGCS2P54868 AL445687.1-201ENST00000439946 251 ntBASIC2.35□□□□□ -2.03
HMGCS2P54868 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.35□□□□□ -2.03
HMGCS2P54868 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.35□□□□□ -2.03
HMGCS2P54868 AC022364.2-201ENST00000457963 554 ntBASIC2.35□□□□□ -2.03
HMGCS2P54868 RPS29P15-201ENST00000458329 171 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms