Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 RPS15AP34-201ENST00000487776 387 ntBASIC3.1□□□□□ -1.91
PMS2P54278 AC006445.1-201ENST00000491925 405 ntBASIC3.1□□□□□ -1.91
PMS2P54278 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.1□□□□□ -1.91
PMS2P54278 SNORA14.1-201ENST00000516113 141 ntBASIC3.1□□□□□ -1.91
PMS2P54278 Y_RNA.675-201ENST00000516389 149 ntBASIC3.1□□□□□ -1.91
PMS2P54278 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.1□□□□□ -1.91
PMS2P54278 CYCSP27-201ENST00000527643 293 ntBASIC3.1□□□□□ -1.91
PMS2P54278 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PMS2P54278 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.1□□□□□ -1.91
PMS2P54278 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.1□□□□□ -1.91
PMS2P54278 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.1□□□□□ -1.91
PMS2P54278 AL355375.2-201ENST00000574825 175 ntBASIC3.1□□□□□ -1.91
PMS2P54278 MIR3672-201ENST00000584290 82 ntBASIC3.1□□□□□ -1.91
PMS2P54278 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.1□□□□□ -1.91
PMS2P54278 AC044792.1-201ENST00000593294 196 ntBASIC3.1□□□□□ -1.91
PMS2P54278 AL353621.2-201ENST00000605340 133 ntBASIC3.1□□□□□ -1.91
PMS2P54278 DUSP12P1-201ENST00000612874 516 ntBASIC3.1□□□□□ -1.91
PMS2P54278 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
PMS2P54278 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
PMS2P54278 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PMS2P54278 MIR422A-201ENST00000362286 90 ntBASIC3.09□□□□□ -1.91
PMS2P54278 RNU6-45P-201ENST00000384471 107 ntBASIC3.09□□□□□ -1.91
PMS2P54278 RNA5SP219-201ENST00000390940 113 ntBASIC3.09□□□□□ -1.91
PMS2P54278 AL139039.1-201ENST00000401900 692 ntBASIC3.09□□□□□ -1.91
PMS2P54278 SNORD88.1-201ENST00000408684 91 ntBASIC3.09□□□□□ -1.91
PMS2P54278 ATG3P1-201ENST00000419507 911 ntBASIC3.09□□□□□ -1.91
PMS2P54278 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.09□□□□□ -1.91
PMS2P54278 SAR1AP4-201ENST00000429225 591 ntBASIC3.09□□□□□ -1.91
PMS2P54278 AL592045.1-201ENST00000429867 352 ntBASIC3.09□□□□□ -1.91
PMS2P54278 RPS29P6-201ENST00000438196 145 ntBASIC3.09□□□□□ -1.91
PMS2P54278 AC233279.1-201ENST00000455300 423 ntBASIC3.09□□□□□ -1.91
PMS2P54278 RPL26P9-201ENST00000457466 433 ntBASIC3.09□□□□□ -1.91
PMS2P54278 UBE2DNL-203ENST00000474922 222 ntBASIC3.09□□□□□ -1.91
PMS2P54278 SUMO2P6-201ENST00000505273 288 ntBASIC3.09□□□□□ -1.91
PMS2P54278 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.09□□□□□ -1.91
PMS2P54278 AC079140.5-201ENST00000507882 310 ntBASIC3.09□□□□□ -1.91
PMS2P54278 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.09□□□□□ -1.91
PMS2P54278 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.09□□□□□ -1.91
PMS2P54278 RNU6-1088P-201ENST00000516850 104 ntBASIC3.09□□□□□ -1.91
PMS2P54278 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.09□□□□□ -1.91
PMS2P54278 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.09□□□□□ -1.91
PMS2P54278 AC093027.1-201ENST00000546698 429 ntBASIC3.09□□□□□ -1.91
PMS2P54278 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.09□□□□□ -1.91
PMS2P54278 AL391261.3-201ENST00000557194 520 ntBASIC3.09□□□□□ -1.91
PMS2P54278 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.09□□□□□ -1.91
PMS2P54278 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.09□□□□□ -1.91
PMS2P54278 MIR1273C-201ENST00000578669 77 ntBASIC3.09□□□□□ -1.91
PMS2P54278 AL050343.2-201ENST00000607338 280 ntBASIC3.09□□□□□ -1.91
PMS2P54278 AL359198.2-201ENST00000611836 194 ntBASIC3.09□□□□□ -1.91
PMS2P54278 uc_338.15-201ENST00000615470 191 ntBASIC3.09□□□□□ -1.91
PMS2P54278 AC007318.2-201ENST00000620999 243 ntBASIC3.09□□□□□ -1.91
PMS2P54278 AC006386.2-201ENST00000624491 75 ntBASIC3.09□□□□□ -1.91
PMS2P54278 AC012005.1-201ENST00000624575 75 ntBASIC3.09□□□□□ -1.91
PMS2P54278 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.09□□□□□ -1.91
PMS2P54278 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
PMS2P54278 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
PMS2P54278 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
PMS2P54278 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.08□□□□□ -1.92
PMS2P54278 AC073325.2-201ENST00000339545 159 ntBASIC3.08□□□□□ -1.92
PMS2P54278 RNU6-884P-201ENST00000363889 107 ntBASIC3.08□□□□□ -1.92
PMS2P54278 RNU1-140P-201ENST00000365040 165 ntBASIC3.08□□□□□ -1.92
PMS2P54278 XGY1-201ENST00000381172 446 ntBASIC3.08□□□□□ -1.92
PMS2P54278 Y_RNA.460-201ENST00000384255 102 ntBASIC3.08□□□□□ -1.92
PMS2P54278 SNORD15B-201ENST00000384714 146 ntBASIC3.08□□□□□ -1.92
PMS2P54278 SNORD67-201ENST00000390833 111 ntBASIC3.08□□□□□ -1.92
PMS2P54278 AL138885.1-201ENST00000405921 675 ntBASIC3.08□□□□□ -1.92
PMS2P54278 MIR548K-201ENST00000408406 116 ntBASIC3.08□□□□□ -1.92
PMS2P54278 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.08□□□□□ -1.92
PMS2P54278 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.08□□□□□ -1.92
PMS2P54278 AL360271.2-201ENST00000447710 161 ntBASIC3.08□□□□□ -1.92
PMS2P54278 RPL7P43-201ENST00000478876 753 ntBASIC3.08□□□□□ -1.92
PMS2P54278 AC097462.2-201ENST00000504623 481 ntBASIC3.08□□□□□ -1.92
PMS2P54278 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.08□□□□□ -1.92
PMS2P54278 RPL23AP94-201ENST00000512518 302 ntBASIC3.08□□□□□ -1.92
PMS2P54278 RNA5SP76-201ENST00000516277 87 ntBASIC3.08□□□□□ -1.92
PMS2P54278 RNU6-256P-201ENST00000516747 97 ntBASIC3.08□□□□□ -1.92
PMS2P54278 RNU6-566P-201ENST00000516790 107 ntBASIC3.08□□□□□ -1.92
PMS2P54278 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.08□□□□□ -1.92
PMS2P54278 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.08□□□□□ -1.92
PMS2P54278 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PMS2P54278 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.08□□□□□ -1.92
PMS2P54278 MIR5692A1-201ENST00000580523 69 ntBASIC3.08□□□□□ -1.92
PMS2P54278 AC023043.2-201ENST00000589678 1026 ntBASIC3.08□□□□□ -1.92
PMS2P54278 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.08□□□□□ -1.92
PMS2P54278 AL355598.1-201ENST00000604169 202 ntBASIC3.08□□□□□ -1.92
PMS2P54278 AC107871.2-201ENST00000612894 502 ntBASIC3.08□□□□□ -1.92
PMS2P54278 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.08□□□□□ -1.92
PMS2P54278 AL512643.1-201ENST00000635735 524 ntBASIC3.08□□□□□ -1.92
PMS2P54278 Z99571.1-201ENST00000636677 394 ntBASIC3.08□□□□□ -1.92
PMS2P54278 MIR1302-1-201ENST00000637932 143 ntBASIC3.08□□□□□ -1.92
PMS2P54278 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
PMS2P54278 AL355596.1-201ENST00000565399 3996 ntBASIC3.08□□□□□ -1.92
PMS2P54278 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.08□□□□□ -1.92
PMS2P54278 AP003122.5-201ENST00000527668 3766 ntBASIC3.07□□□□□ -1.92
PMS2P54278 AC008669.1-201ENST00000565823 2178 ntBASIC3.07□□□□□ -1.92
PMS2P54278 Y_RNA.135-201ENST00000363439 95 ntBASIC3.07□□□□□ -1.92
PMS2P54278 RNU1-105P-201ENST00000363470 161 ntBASIC3.07□□□□□ -1.92
PMS2P54278 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
PMS2P54278 Y_RNA.387-201ENST00000383918 102 ntBASIC3.07□□□□□ -1.92
PMS2P54278 Y_RNA.480-201ENST00000384364 102 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 178.6 ms