Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 TRBV8-1-201ENST00000481590 279 ntBASIC-0.24□□□□□ -2.45
CLTCL1P53675 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC-0.24□□□□□ -2.45
CLTCL1P53675 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC-0.24□□□□□ -2.45
CLTCL1P53675 AP002826.1-201ENST00000608835 315 ntBASIC-0.24□□□□□ -2.45
CLTCL1P53675 AC096586.2-201ENST00000610260 441 ntBASIC-0.24□□□□□ -2.45
CLTCL1P53675 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC-0.24□□□□□ -2.45
CLTCL1P53675 AC009233.1-201ENST00000616477 371 ntBASIC-0.24□□□□□ -2.45
CLTCL1P53675 MIR5739-201ENST00000619803 80 ntBASIC-0.24□□□□□ -2.45
CLTCL1P53675 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-0.24□□□□□ -2.45
CLTCL1P53675 UBE2Q2P1-202ENST00000354771 883 ntBASIC-0.24□□□□□ -2.45
CLTCL1P53675 RNU6-1074P-201ENST00000383995 104 ntBASIC-0.24□□□□□ -2.45
CLTCL1P53675 RNU2-63P-201ENST00000410792 194 ntBASIC-0.24□□□□□ -2.45
CLTCL1P53675 BPY2DP-201ENST00000422208 265 ntBASIC-0.24□□□□□ -2.45
CLTCL1P53675 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC-0.24□□□□□ -2.45
CLTCL1P53675 RNU6-1282P-201ENST00000516735 96 ntBASIC-0.24□□□□□ -2.45
CLTCL1P53675 AP003392.2-201ENST00000527269 208 ntBASIC-0.24□□□□□ -2.45
CLTCL1P53675 AC026371.1-201ENST00000551867 419 ntBASIC-0.24□□□□□ -2.45
CLTCL1P53675 AC105129.3-201ENST00000605455 485 ntBASIC-0.24□□□□□ -2.45
CLTCL1P53675 AC091965.5-201ENST00000624785 342 ntBASIC-0.24□□□□□ -2.45
CLTCL1P53675 RNA5SP264-201ENST00000363115 107 ntBASIC-0.25□□□□□ -2.45
CLTCL1P53675 RNU6-414P-201ENST00000363705 104 ntBASIC-0.25□□□□□ -2.45
CLTCL1P53675 RNU6-302P-201ENST00000365249 107 ntBASIC-0.25□□□□□ -2.45
CLTCL1P53675 MIR200A-201ENST00000384875 90 ntBASIC-0.25□□□□□ -2.45
CLTCL1P53675 RNA5SP266-201ENST00000410273 108 ntBASIC-0.25□□□□□ -2.45
CLTCL1P53675 RPS3AP1-201ENST00000413190 320 ntBASIC-0.25□□□□□ -2.45
CLTCL1P53675 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC-0.25□□□□□ -2.45
CLTCL1P53675 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC-0.25□□□□□ -2.45
CLTCL1P53675 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC-0.25□□□□□ -2.45
CLTCL1P53675 snoU13.11-201ENST00000459219 104 ntBASIC-0.25□□□□□ -2.45
CLTCL1P53675 SNORA31.17-201ENST00000516953 127 ntBASIC-0.25□□□□□ -2.45
CLTCL1P53675 SNORA70.22-201ENST00000517160 124 ntBASIC-0.25□□□□□ -2.45
CLTCL1P53675 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC-0.25□□□□□ -2.45
CLTCL1P53675 DUXAP1-201ENST00000556632 463 ntBASIC-0.25□□□□□ -2.45
CLTCL1P53675 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC-0.25□□□□□ -2.45
CLTCL1P53675 RNU6V-201ENST00000384105 107 ntBASIC-0.26□□□□□ -2.45
CLTCL1P53675 SNORA51.6-201ENST00000384151 125 ntBASIC-0.26□□□□□ -2.45
CLTCL1P53675 RNA5SP56-201ENST00000410277 118 ntBASIC-0.26□□□□□ -2.45
CLTCL1P53675 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC-0.26□□□□□ -2.45
CLTCL1P53675 AC016065.2-201ENST00000514530 444 ntBASIC-0.26□□□□□ -2.45
CLTCL1P53675 SNORA68.3-201ENST00000515906 83 ntBASIC-0.26□□□□□ -2.45
CLTCL1P53675 RNA5SP255-201ENST00000516370 107 ntBASIC-0.26□□□□□ -2.45
CLTCL1P53675 RNA5SP168-201ENST00000516642 112 ntBASIC-0.26□□□□□ -2.45
CLTCL1P53675 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC-0.26□□□□□ -2.45
CLTCL1P53675 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC-0.27□□□□□ -2.45
CLTCL1P53675 AL034418.1-201ENST00000448675 860 ntBASIC-0.27□□□□□ -2.45
CLTCL1P53675 MTCO1P18-201ENST00000455518 1419 ntBASIC-0.27□□□□□ -2.45
CLTCL1P53675 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC-0.27□□□□□ -2.45
CLTCL1P53675 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC-0.27□□□□□ -2.45
CLTCL1P53675 MIR548AX-201ENST00000580117 73 ntBASIC-0.27□□□□□ -2.45
CLTCL1P53675 AP000403.1-201ENST00000603349 851 ntBASIC-0.27□□□□□ -2.45
CLTCL1P53675 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC-0.27□□□□□ -2.45
CLTCL1P53675 SNORD114-28-201ENST00000363610 72 ntBASIC-0.27□□□□□ -2.45
CLTCL1P53675 SNORD114-9-201ENST00000364370 72 ntBASIC-0.27□□□□□ -2.45
CLTCL1P53675 SNORA32.1-201ENST00000364514 115 ntBASIC-0.27□□□□□ -2.45
CLTCL1P53675 RNU6-1293P-201ENST00000384077 107 ntBASIC-0.27□□□□□ -2.45
CLTCL1P53675 CALM2P3-201ENST00000400429 449 ntBASIC-0.27□□□□□ -2.45
CLTCL1P53675 HMGB1P17-201ENST00000403495 628 ntBASIC-0.27□□□□□ -2.45
CLTCL1P53675 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC-0.27□□□□□ -2.45
CLTCL1P53675 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC-0.27□□□□□ -2.45
CLTCL1P53675 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC-0.27□□□□□ -2.45
CLTCL1P53675 LARP7P4-201ENST00000481075 878 ntBASIC-0.27□□□□□ -2.45
CLTCL1P53675 AC105758.1-201ENST00000506038 399 ntBASIC-0.27□□□□□ -2.45
CLTCL1P53675 RNU6ATAC13P-201ENST00000516152 131 ntBASIC-0.27□□□□□ -2.45
CLTCL1P53675 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC-0.27□□□□□ -2.45
CLTCL1P53675 COPS8P3-201ENST00000526024 482 ntBASIC-0.27□□□□□ -2.45
CLTCL1P53675 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC-0.27□□□□□ -2.45
CLTCL1P53675 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC-0.27□□□□□ -2.45
CLTCL1P53675 AC090330.1-201ENST00000588646 764 ntBASIC-0.27□□□□□ -2.45
CLTCL1P53675 AC073410.2-201ENST00000603240 332 ntBASIC-0.27□□□□□ -2.45
CLTCL1P53675 AL353765.1-201ENST00000605514 183 ntBASIC-0.27□□□□□ -2.45
CLTCL1P53675 RNU6-156P-201ENST00000621869 107 ntBASIC-0.27□□□□□ -2.45
CLTCL1P53675 AC097372.4-201ENST00000625025 466 ntBASIC-0.27□□□□□ -2.45
CLTCL1P53675 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.28□□□□□ -2.45
CLTCL1P53675 MIR29C-201ENST00000385231 88 ntBASIC-0.28□□□□□ -2.45
CLTCL1P53675 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC-0.28□□□□□ -2.45
CLTCL1P53675 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC-0.28□□□□□ -2.45
CLTCL1P53675 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC-0.28□□□□□ -2.45
CLTCL1P53675 RNA5SP227-201ENST00000516184 113 ntBASIC-0.28□□□□□ -2.45
CLTCL1P53675 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC-0.28□□□□□ -2.45
CLTCL1P53675 KATNBL1P5-201ENST00000605015 517 ntBASIC-0.28□□□□□ -2.45
CLTCL1P53675 AC073308.1-201ENST00000623696 305 ntBASIC-0.28□□□□□ -2.45
CLTCL1P53675 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC-0.28□□□□□ -2.45
CLTCL1P53675 MIR4315-1-201ENST00000636800 73 ntBASIC-0.28□□□□□ -2.45
CLTCL1P53675 MIR4315-2-201ENST00000640925 73 ntBASIC-0.28□□□□□ -2.45
CLTCL1P53675 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC-0.28□□□□□ -2.46
CLTCL1P53675 RNA5SP214-201ENST00000363378 118 ntBASIC-0.29□□□□□ -2.46
CLTCL1P53675 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.29□□□□□ -2.46
CLTCL1P53675 RNU6-750P-201ENST00000390946 107 ntBASIC-0.29□□□□□ -2.46
CLTCL1P53675 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC-0.29□□□□□ -2.46
CLTCL1P53675 RN7SKP88-201ENST00000516847 250 ntBASIC-0.29□□□□□ -2.46
CLTCL1P53675 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC-0.29□□□□□ -2.46
CLTCL1P53675 AC022616.8-201ENST00000533569 253 ntBASIC-0.29□□□□□ -2.46
CLTCL1P53675 AL512310.8-201ENST00000550183 120 ntBASIC-0.29□□□□□ -2.46
CLTCL1P53675 AL356157.2-201ENST00000605122 111 ntBASIC-0.29□□□□□ -2.46
CLTCL1P53675 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC-0.29□□□□□ -2.46
CLTCL1P53675 AC009237.15-201ENST00000610252 501 ntBASIC-0.29□□□□□ -2.46
CLTCL1P53675 7SK.8-201ENST00000612110 250 ntBASIC-0.29□□□□□ -2.46
CLTCL1P53675 7SK.11-201ENST00000615477 250 ntBASIC-0.29□□□□□ -2.46
CLTCL1P53675 7SK.13-201ENST00000622040 250 ntBASIC-0.29□□□□□ -2.46
CLTCL1P53675 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.3□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms