Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 HMGB1P12-201ENST00000438594 598 ntBASIC3.31□□□□□ -1.88
COPB1P53618 AC130509.1-201ENST00000464158 433 ntBASIC3.31□□□□□ -1.88
COPB1P53618 AC027575.1-201ENST00000481064 460 ntBASIC3.31□□□□□ -1.88
COPB1P53618 RPS4XP13-201ENST00000483219 789 ntBASIC3.31□□□□□ -1.88
COPB1P53618 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.31□□□□□ -1.88
COPB1P53618 RNA5SP468-201ENST00000516782 93 ntBASIC3.31□□□□□ -1.88
COPB1P53618 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.31□□□□□ -1.88
COPB1P53618 AP003072.1-201ENST00000531740 145 ntBASIC3.31□□□□□ -1.88
COPB1P53618 AC025423.5-201ENST00000550230 219 ntBASIC3.31□□□□□ -1.88
COPB1P53618 AC026371.1-201ENST00000551867 419 ntBASIC3.31□□□□□ -1.88
COPB1P53618 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.31□□□□□ -1.88
COPB1P53618 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.31□□□□□ -1.88
COPB1P53618 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.31□□□□□ -1.88
COPB1P53618 AC007938.3-201ENST00000604965 623 ntBASIC3.31□□□□□ -1.88
COPB1P53618 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.31□□□□□ -1.88
COPB1P53618 Y_RNA.812-201ENST00000610788 101 ntBASIC3.31□□□□□ -1.88
COPB1P53618 Y_RNA.784-201ENST00000613803 101 ntBASIC3.31□□□□□ -1.88
COPB1P53618 Y_RNA.787-201ENST00000616522 101 ntBASIC3.31□□□□□ -1.88
COPB1P53618 Y_RNA.780-201ENST00000617336 101 ntBASIC3.31□□□□□ -1.88
COPB1P53618 Y_RNA.801-201ENST00000619005 101 ntBASIC3.31□□□□□ -1.88
COPB1P53618 MIR622-201ENST00000638396 96 ntBASIC3.31□□□□□ -1.88
COPB1P53618 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
COPB1P53618 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.31□□□□□ -1.88
COPB1P53618 AC110774.1-201ENST00000623567 2018 ntBASIC3.31□□□□□ -1.88
COPB1P53618 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
COPB1P53618 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
COPB1P53618 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
COPB1P53618 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
COPB1P53618 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
COPB1P53618 Y_RNA.132-201ENST00000363421 102 ntBASIC3.3□□□□□ -1.88
COPB1P53618 RNU6-593P-201ENST00000364716 112 ntBASIC3.3□□□□□ -1.88
COPB1P53618 Y_RNA.324-201ENST00000365165 102 ntBASIC3.3□□□□□ -1.88
COPB1P53618 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
COPB1P53618 RNU6-1197P-201ENST00000391183 107 ntBASIC3.3□□□□□ -1.88
COPB1P53618 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.3□□□□□ -1.88
COPB1P53618 AL353729.1-201ENST00000425044 720 ntBASIC3.3□□□□□ -1.88
COPB1P53618 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.3□□□□□ -1.88
COPB1P53618 HMGB1P9-201ENST00000429856 646 ntBASIC3.3□□□□□ -1.88
COPB1P53618 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.3□□□□□ -1.88
COPB1P53618 HIGD1AP11-201ENST00000438361 280 ntBASIC3.3□□□□□ -1.88
COPB1P53618 Z82210.1-201ENST00000440037 231 ntBASIC3.3□□□□□ -1.88
COPB1P53618 NDUFB1P2-201ENST00000449477 176 ntBASIC3.3□□□□□ -1.88
COPB1P53618 AL135752.1-201ENST00000479477 471 ntBASIC3.3□□□□□ -1.88
COPB1P53618 HMGB1P30-201ENST00000492455 606 ntBASIC3.3□□□□□ -1.88
COPB1P53618 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.3□□□□□ -1.88
COPB1P53618 AC139453.3-201ENST00000493276 369 ntBASIC3.3□□□□□ -1.88
COPB1P53618 AC026801.1-201ENST00000497178 464 ntBASIC3.3□□□□□ -1.88
COPB1P53618 RNU6-1170P-201ENST00000515974 106 ntBASIC3.3□□□□□ -1.88
COPB1P53618 MIR892C-201ENST00000516410 77 ntBASIC3.3□□□□□ -1.88
COPB1P53618 AC069113.1-201ENST00000517763 267 ntBASIC3.3□□□□□ -1.88
COPB1P53618 AC005034.5-201ENST00000604219 466 ntBASIC3.3□□□□□ -1.88
COPB1P53618 AL133215.3-201ENST00000609801 448 ntBASIC3.3□□□□□ -1.88
COPB1P53618 AC006023.2-201ENST00000609916 167 ntBASIC3.3□□□□□ -1.88
COPB1P53618 AC090971.5-201ENST00000621102 293 ntBASIC3.3□□□□□ -1.88
COPB1P53618 AC134503.1-201ENST00000633048 54 ntBASIC3.3□□□□□ -1.88
COPB1P53618 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
COPB1P53618 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.3□□□□□ -1.88
COPB1P53618 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.3□□□□□ -1.88
COPB1P53618 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
COPB1P53618 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
COPB1P53618 AL035425.3-201ENST00000564206 4996 ntBASIC3.29□□□□□ -1.88
COPB1P53618 Y_RNA.187-201ENST00000363918 113 ntBASIC3.29□□□□□ -1.88
COPB1P53618 RNU6-1329P-201ENST00000365664 107 ntBASIC3.29□□□□□ -1.88
COPB1P53618 DEFB109C-201ENST00000382575 264 ntBASIC3.29□□□□□ -1.88
COPB1P53618 DEFB109B-201ENST00000382656 264 ntBASIC3.29□□□□□ -1.88
COPB1P53618 Y_RNA.395-201ENST00000383945 109 ntBASIC3.29□□□□□ -1.88
COPB1P53618 RNU6-214P-201ENST00000384130 107 ntBASIC3.29□□□□□ -1.88
COPB1P53618 RNU6-601P-201ENST00000384540 107 ntBASIC3.29□□□□□ -1.88
COPB1P53618 MIR128-1-201ENST00000384921 82 ntBASIC3.29□□□□□ -1.88
COPB1P53618 MIR181B1-201ENST00000385240 110 ntBASIC3.29□□□□□ -1.88
COPB1P53618 SNORA48.2-201ENST00000390926 124 ntBASIC3.29□□□□□ -1.88
COPB1P53618 RNA5SP129-201ENST00000410276 118 ntBASIC3.29□□□□□ -1.88
COPB1P53618 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.29□□□□□ -1.88
COPB1P53618 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.29□□□□□ -1.88
COPB1P53618 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.29□□□□□ -1.88
COPB1P53618 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.29□□□□□ -1.88
COPB1P53618 AL645568.3-201ENST00000433683 316 ntBASIC3.29□□□□□ -1.88
COPB1P53618 NDUFB4P6-201ENST00000436819 366 ntBASIC3.29□□□□□ -1.88
COPB1P53618 HMGN2P20-201ENST00000437531 273 ntBASIC3.29□□□□□ -1.88
COPB1P53618 ELOCP24-201ENST00000456370 334 ntBASIC3.29□□□□□ -1.88
COPB1P53618 AC096576.1-201ENST00000489014 359 ntBASIC3.29□□□□□ -1.88
COPB1P53618 RNA5SP291-201ENST00000517222 105 ntBASIC3.29□□□□□ -1.88
COPB1P53618 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.29□□□□□ -1.88
COPB1P53618 CASP1P1-201ENST00000526345 212 ntBASIC3.29□□□□□ -1.88
COPB1P53618 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
COPB1P53618 AL121821.2-201ENST00000556081 394 ntBASIC3.29□□□□□ -1.88
COPB1P53618 MIR5690-201ENST00000583739 73 ntBASIC3.29□□□□□ -1.88
COPB1P53618 AL080274.1-201ENST00000605565 220 ntBASIC3.29□□□□□ -1.88
COPB1P53618 RNU6-85P-201ENST00000605989 107 ntBASIC3.29□□□□□ -1.88
COPB1P53618 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
COPB1P53618 AC010378.1-201ENST00000619270 362 ntBASIC3.29□□□□□ -1.88
COPB1P53618 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.29□□□□□ -1.88
COPB1P53618 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
COPB1P53618 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
COPB1P53618 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
COPB1P53618 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
COPB1P53618 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
COPB1P53618 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.28□□□□□ -1.88
COPB1P53618 MIR412-201ENST00000362142 91 ntBASIC3.28□□□□□ -1.88
COPB1P53618 MIR369-201ENST00000362155 70 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms