Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.44□□□□□ -1.7
USP11P51784 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
USP11P51784 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
USP11P51784 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.44□□□□□ -1.7
USP11P51784 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
USP11P51784 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.43□□□□□ -1.7
USP11P51784 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.43□□□□□ -1.7
USP11P51784 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
USP11P51784 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
USP11P51784 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
USP11P51784 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
USP11P51784 RNU6-858P-201ENST00000362436 107 ntBASIC4.43□□□□□ -1.7
USP11P51784 MIR23B-201ENST00000384832 97 ntBASIC4.43□□□□□ -1.7
USP11P51784 MIR199A2-201ENST00000385289 110 ntBASIC4.43□□□□□ -1.7
USP11P51784 RNU6ATAC15P-201ENST00000408279 121 ntBASIC4.43□□□□□ -1.7
USP11P51784 SNORA3.3-201ENST00000408712 125 ntBASIC4.43□□□□□ -1.7
USP11P51784 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.43□□□□□ -1.7
USP11P51784 NDUFB4P10-201ENST00000452541 359 ntBASIC4.43□□□□□ -1.7
USP11P51784 AC109925.1-201ENST00000478069 331 ntBASIC4.43□□□□□ -1.7
USP11P51784 PPIAP15-201ENST00000479662 484 ntBASIC4.43□□□□□ -1.7
USP11P51784 SEPT14P8-201ENST00000508026 178 ntBASIC4.43□□□□□ -1.7
USP11P51784 RNU7-200P-201ENST00000516105 62 ntBASIC4.43□□□□□ -1.7
USP11P51784 Y_RNA.706-201ENST00000516933 99 ntBASIC4.43□□□□□ -1.7
USP11P51784 MIR2355-201ENST00000517199 87 ntBASIC4.43□□□□□ -1.7
USP11P51784 MTND5P41-201ENST00000517498 206 ntBASIC4.43□□□□□ -1.7
USP11P51784 AP006245.1-201ENST00000522549 120 ntBASIC4.43□□□□□ -1.7
USP11P51784 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.43□□□□□ -1.7
USP11P51784 RPL23AP78-201ENST00000599928 470 ntBASIC4.43□□□□□ -1.7
USP11P51784 Z83818.1-201ENST00000603584 150 ntBASIC4.43□□□□□ -1.7
USP11P51784 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
USP11P51784 AL354798.1-201ENST00000622505 329 ntBASIC4.43□□□□□ -1.7
USP11P51784 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.43□□□□□ -1.7
USP11P51784 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
USP11P51784 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
USP11P51784 IPO8P1-201ENST00000455509 3109 ntBASIC4.42□□□□□ -1.7
USP11P51784 AC106871.1-201ENST00000568324 3102 ntBASIC4.42□□□□□ -1.7
USP11P51784 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
USP11P51784 UBE3AP2-201ENST00000429033 2259 ntBASIC4.42□□□□□ -1.7
USP11P51784 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.42□□□□□ -1.7
USP11P51784 Y_RNA.44-201ENST00000362676 108 ntBASIC4.42□□□□□ -1.7
USP11P51784 RNU6-1301P-201ENST00000362724 104 ntBASIC4.42□□□□□ -1.7
USP11P51784 RNU6-740P-201ENST00000364734 105 ntBASIC4.42□□□□□ -1.7
USP11P51784 RN7SKP177-201ENST00000410567 355 ntBASIC4.42□□□□□ -1.7
USP11P51784 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.42□□□□□ -1.7
USP11P51784 AL358453.1-201ENST00000422522 250 ntBASIC4.42□□□□□ -1.7
USP11P51784 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.42□□□□□ -1.7
USP11P51784 AL591043.1-201ENST00000432461 424 ntBASIC4.42□□□□□ -1.7
USP11P51784 Z82188.1-201ENST00000436709 154 ntBASIC4.42□□□□□ -1.7
USP11P51784 RPL21P104-201ENST00000464143 478 ntBASIC4.42□□□□□ -1.7
USP11P51784 RNU7-175P-201ENST00000515915 61 ntBASIC4.42□□□□□ -1.7
USP11P51784 CYCSP30-201ENST00000546447 172 ntBASIC4.42□□□□□ -1.7
USP11P51784 AC005476.1-201ENST00000554427 397 ntBASIC4.42□□□□□ -1.7
USP11P51784 AC034105.4-201ENST00000568304 277 ntBASIC4.42□□□□□ -1.7
USP11P51784 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.42□□□□□ -1.7
USP11P51784 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC4.42□□□□□ -1.7
USP11P51784 AC008121.1-201ENST00000603244 268 ntBASIC4.42□□□□□ -1.7
USP11P51784 AL591424.2-201ENST00000617023 128 ntBASIC4.42□□□□□ -1.7
USP11P51784 AC034229.5-201ENST00000624258 185 ntBASIC4.42□□□□□ -1.7
USP11P51784 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.42□□□□□ -1.7
USP11P51784 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
USP11P51784 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
USP11P51784 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
USP11P51784 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.41□□□□□ -1.7
USP11P51784 RNU6-227P-201ENST00000362865 103 ntBASIC4.41□□□□□ -1.7
USP11P51784 Y_RNA.123-201ENST00000363338 102 ntBASIC4.41□□□□□ -1.7
USP11P51784 Y_RNA.286-201ENST00000364813 102 ntBASIC4.41□□□□□ -1.7
USP11P51784 Y_RNA.292-201ENST00000364904 97 ntBASIC4.41□□□□□ -1.7
USP11P51784 Y_RNA.623-201ENST00000411128 95 ntBASIC4.41□□□□□ -1.7
USP11P51784 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
USP11P51784 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.41□□□□□ -1.7
USP11P51784 FABP5P15-201ENST00000453566 214 ntBASIC4.41□□□□□ -1.7
USP11P51784 TOMM22P6-201ENST00000465035 409 ntBASIC4.41□□□□□ -1.7
USP11P51784 COX6CP14-201ENST00000469580 174 ntBASIC4.41□□□□□ -1.7
USP11P51784 AL049874.1-201ENST00000489560 388 ntBASIC4.41□□□□□ -1.7
USP11P51784 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.41□□□□□ -1.7
USP11P51784 AC109479.2-201ENST00000517842 174 ntBASIC4.41□□□□□ -1.7
USP11P51784 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.41□□□□□ -1.7
USP11P51784 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.41□□□□□ -1.7
USP11P51784 AL121603.1-201ENST00000553815 142 ntBASIC4.41□□□□□ -1.7
USP11P51784 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC4.41□□□□□ -1.7
USP11P51784 AC090617.3-201ENST00000573670 475 ntBASIC4.41□□□□□ -1.7
USP11P51784 AC060766.3-201ENST00000591442 263 ntBASIC4.41□□□□□ -1.7
USP11P51784 AC072026.1-201ENST00000605023 201 ntBASIC4.41□□□□□ -1.7
USP11P51784 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.41□□□□□ -1.7
USP11P51784 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
USP11P51784 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
USP11P51784 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
USP11P51784 MAPK10-372ENST00000641954 3413 ntBASIC4.41□□□□□ -1.7
USP11P51784 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
USP11P51784 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
USP11P51784 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
USP11P51784 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
USP11P51784 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
USP11P51784 OR4G2P-202ENST00000641004 1759 ntBASIC4.4□□□□□ -1.7
USP11P51784 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
USP11P51784 RNU4-90P-201ENST00000362773 141 ntBASIC4.4□□□□□ -1.71
USP11P51784 RNU6-81P-201ENST00000365608 104 ntBASIC4.4□□□□□ -1.71
USP11P51784 U1.1-201ENST00000384101 164 ntBASIC4.4□□□□□ -1.71
USP11P51784 SNORD63-201ENST00000384262 68 ntBASIC4.4□□□□□ -1.71
USP11P51784 RNU6-804P-201ENST00000384286 107 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms