Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 MIR3199-1-201ENST00000582434 88 ntBASIC1.74□□□□□ -2.13
CXCL12P48061 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.74□□□□□ -2.13
CXCL12P48061 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.74□□□□□ -2.13
CXCL12P48061 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.74□□□□□ -2.13
CXCL12P48061 AC010329.5-201ENST00000623497 2174 ntBASIC1.74□□□□□ -2.13
CXCL12P48061 MTND4P4-201ENST00000439033 1366 ntBASIC1.73□□□□□ -2.13
CXCL12P48061 MTND4P27-201ENST00000450813 1354 ntBASIC1.73□□□□□ -2.13
CXCL12P48061 AL391987.6-201ENST00000305671 199 ntBASIC1.73□□□□□ -2.13
CXCL12P48061 Y_RNA.40-201ENST00000362645 93 ntBASIC1.73□□□□□ -2.13
CXCL12P48061 RNU6-898P-201ENST00000365627 104 ntBASIC1.73□□□□□ -2.13
CXCL12P48061 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC1.73□□□□□ -2.13
CXCL12P48061 RNU6-19P-201ENST00000384718 107 ntBASIC1.73□□□□□ -2.13
CXCL12P48061 Y_RNA.598-201ENST00000410480 95 ntBASIC1.73□□□□□ -2.13
CXCL12P48061 RNU6-1025P-201ENST00000410629 104 ntBASIC1.73□□□□□ -2.13
CXCL12P48061 USP9YP6-201ENST00000413550 854 ntBASIC1.73□□□□□ -2.13
CXCL12P48061 ELOCP4-201ENST00000420090 333 ntBASIC1.73□□□□□ -2.13
CXCL12P48061 PTGES3P4-201ENST00000426243 356 ntBASIC1.73□□□□□ -2.13
CXCL12P48061 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.73□□□□□ -2.13
CXCL12P48061 AC004383.1-201ENST00000438135 289 ntBASIC1.73□□□□□ -2.13
CXCL12P48061 AL445567.1-201ENST00000439121 144 ntBASIC1.73□□□□□ -2.13
CXCL12P48061 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.73□□□□□ -2.13
CXCL12P48061 USP9YP15-201ENST00000442391 422 ntBASIC1.73□□□□□ -2.13
CXCL12P48061 SNRPFP4-201ENST00000456366 242 ntBASIC1.73□□□□□ -2.13
CXCL12P48061 AC090515.1-201ENST00000465295 476 ntBASIC1.73□□□□□ -2.13
CXCL12P48061 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.73□□□□□ -2.13
CXCL12P48061 RAP1BP2-201ENST00000478270 544 ntBASIC1.73□□□□□ -2.13
CXCL12P48061 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.73□□□□□ -2.13
CXCL12P48061 AC023141.11-201ENST00000508864 202 ntBASIC1.73□□□□□ -2.13
CXCL12P48061 Y_RNA.672-201ENST00000516289 104 ntBASIC1.73□□□□□ -2.13
CXCL12P48061 RNU2-46P-201ENST00000517038 113 ntBASIC1.73□□□□□ -2.13
CXCL12P48061 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.73□□□□□ -2.13
CXCL12P48061 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.73□□□□□ -2.13
CXCL12P48061 AL157871.3-201ENST00000557231 293 ntBASIC1.73□□□□□ -2.13
CXCL12P48061 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.73□□□□□ -2.13
CXCL12P48061 MIR4782-201ENST00000577987 79 ntBASIC1.73□□□□□ -2.13
CXCL12P48061 MIR4448-201ENST00000584360 86 ntBASIC1.73□□□□□ -2.13
CXCL12P48061 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.73□□□□□ -2.13
CXCL12P48061 AC174048.1-201ENST00000603389 144 ntBASIC1.73□□□□□ -2.13
CXCL12P48061 AL158032.1-201ENST00000605401 106 ntBASIC1.73□□□□□ -2.13
CXCL12P48061 AC091304.9-201ENST00000612091 226 ntBASIC1.73□□□□□ -2.13
CXCL12P48061 MIR6134-201ENST00000617606 109 ntBASIC1.73□□□□□ -2.13
CXCL12P48061 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.73□□□□□ -2.13
CXCL12P48061 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.72□□□□□ -2.13
CXCL12P48061 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CXCL12P48061 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.72□□□□□ -2.13
CXCL12P48061 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CXCL12P48061 Y_RNA.169-201ENST00000363745 96 ntBASIC1.72□□□□□ -2.13
CXCL12P48061 Y_RNA.327-201ENST00000365201 102 ntBASIC1.72□□□□□ -2.13
CXCL12P48061 SNORA75B-201ENST00000384053 137 ntBASIC1.72□□□□□ -2.13
CXCL12P48061 AP000275.1-201ENST00000411943 390 ntBASIC1.72□□□□□ -2.13
CXCL12P48061 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.72□□□□□ -2.13
CXCL12P48061 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.72□□□□□ -2.13
CXCL12P48061 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.72□□□□□ -2.13
CXCL12P48061 AC137499.1-201ENST00000427602 88 ntBASIC1.72□□□□□ -2.13
CXCL12P48061 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.72□□□□□ -2.13
CXCL12P48061 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.72□□□□□ -2.13
CXCL12P48061 RPL7P34-201ENST00000433316 712 ntBASIC1.72□□□□□ -2.13
CXCL12P48061 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.72□□□□□ -2.13
CXCL12P48061 AC009474.2-201ENST00000451383 136 ntBASIC1.72□□□□□ -2.13
CXCL12P48061 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.72□□□□□ -2.13
CXCL12P48061 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.72□□□□□ -2.13
CXCL12P48061 AP001324.2-201ENST00000461163 319 ntBASIC1.72□□□□□ -2.13
CXCL12P48061 MTCO2P29-201ENST00000465212 189 ntBASIC1.72□□□□□ -2.13
CXCL12P48061 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.72□□□□□ -2.13
CXCL12P48061 AC116655.1-201ENST00000508324 901 ntBASIC1.72□□□□□ -2.13
CXCL12P48061 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.72□□□□□ -2.13
CXCL12P48061 AC022616.3-201ENST00000523940 148 ntBASIC1.72□□□□□ -2.13
CXCL12P48061 OR5AQ1P-201ENST00000527596 927 ntBASIC1.72□□□□□ -2.13
CXCL12P48061 LINC00933-203ENST00000559812 219 ntBASIC1.72□□□□□ -2.13
CXCL12P48061 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.72□□□□□ -2.13
CXCL12P48061 SNORD53B-201ENST00000577887 78 ntBASIC1.72□□□□□ -2.13
CXCL12P48061 MIR1273C-201ENST00000578669 77 ntBASIC1.72□□□□□ -2.13
CXCL12P48061 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.72□□□□□ -2.13
CXCL12P48061 AC103987.3-201ENST00000582071 292 ntBASIC1.72□□□□□ -2.13
CXCL12P48061 AL021997.1-201ENST00000605757 193 ntBASIC1.72□□□□□ -2.13
CXCL12P48061 SNORD14A-201ENST00000606526 91 ntBASIC1.72□□□□□ -2.13
CXCL12P48061 AL451064.1-201ENST00000607718 471 ntBASIC1.72□□□□□ -2.13
CXCL12P48061 AC012360.2-201ENST00000609349 391 ntBASIC1.72□□□□□ -2.13
CXCL12P48061 uc_338.5-201ENST00000611839 155 ntBASIC1.72□□□□□ -2.13
CXCL12P48061 AC025048.6-202ENST00000627667 438 ntBASIC1.72□□□□□ -2.13
CXCL12P48061 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.72□□□□□ -2.13
CXCL12P48061 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CXCL12P48061 MTND4P23-201ENST00000447723 1363 ntBASIC1.72□□□□□ -2.13
CXCL12P48061 CDC27P3-201ENST00000635418 1910 ntBASIC1.72□□□□□ -2.13
CXCL12P48061 AC006026.1-201ENST00000444025 1803 ntBASIC1.71□□□□□ -2.14
CXCL12P48061 AC027514.1-201ENST00000588561 1603 ntBASIC1.71□□□□□ -2.14
CXCL12P48061 AC073343.1-201ENST00000328239 651 ntBASIC1.71□□□□□ -2.14
CXCL12P48061 Y_RNA.33-201ENST00000362591 102 ntBASIC1.71□□□□□ -2.14
CXCL12P48061 SNORA3A-201ENST00000364113 130 ntBASIC1.71□□□□□ -2.14
CXCL12P48061 RNU6-1280P-201ENST00000365211 107 ntBASIC1.71□□□□□ -2.14
CXCL12P48061 RNU6-166P-201ENST00000384371 107 ntBASIC1.71□□□□□ -2.14
CXCL12P48061 MIR489-201ENST00000384923 84 ntBASIC1.71□□□□□ -2.14
CXCL12P48061 MIR17-201ENST00000385012 84 ntBASIC1.71□□□□□ -2.14
CXCL12P48061 MIR147B-201ENST00000390185 80 ntBASIC1.71□□□□□ -2.14
CXCL12P48061 SNORA40C-201ENST00000391285 128 ntBASIC1.71□□□□□ -2.14
CXCL12P48061 RPL23AP32-201ENST00000395315 459 ntBASIC1.71□□□□□ -2.14
CXCL12P48061 AC004965.1-201ENST00000413033 213 ntBASIC1.71□□□□□ -2.14
CXCL12P48061 CYCSP46-201ENST00000423569 204 ntBASIC1.71□□□□□ -2.14
CXCL12P48061 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.71□□□□□ -2.14
CXCL12P48061 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 158.1 ms