Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 RPS29P20-201ENST00000489592 171 ntBASIC2.51□□□□□ -2.01
NEDD4P46934 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.51□□□□□ -2.01
NEDD4P46934 RPS29P21-201ENST00000496272 170 ntBASIC2.51□□□□□ -2.01
NEDD4P46934 LRRC34P2-201ENST00000514850 553 ntBASIC2.51□□□□□ -2.01
NEDD4P46934 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.51□□□□□ -2.01
NEDD4P46934 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.51□□□□□ -2.01
NEDD4P46934 AC008752.3-201ENST00000588113 712 ntBASIC2.51□□□□□ -2.01
NEDD4P46934 RPL23AP78-201ENST00000599928 470 ntBASIC2.51□□□□□ -2.01
NEDD4P46934 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.51□□□□□ -2.01
NEDD4P46934 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.51□□□□□ -2.01
NEDD4P46934 U6.99-201ENST00000637524 83 ntBASIC2.51□□□□□ -2.01
NEDD4P46934 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.51□□□□□ -2.01
NEDD4P46934 MTND4P14-201ENST00000435799 1354 ntBASIC2.51□□□□□ -2.01
NEDD4P46934 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
NEDD4P46934 AC099654.7-201ENST00000635788 2127 ntBASIC2.51□□□□□ -2.01
NEDD4P46934 MIR412-201ENST00000362142 91 ntBASIC2.5□□□□□ -2.01
NEDD4P46934 U8.2-201ENST00000363156 134 ntBASIC2.5□□□□□ -2.01
NEDD4P46934 RNU6-996P-201ENST00000365438 107 ntBASIC2.5□□□□□ -2.01
NEDD4P46934 RNU6-116P-201ENST00000384042 109 ntBASIC2.5□□□□□ -2.01
NEDD4P46934 RNU6-658P-201ENST00000384606 106 ntBASIC2.5□□□□□ -2.01
NEDD4P46934 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
NEDD4P46934 RNU6-1158P-201ENST00000391167 107 ntBASIC2.5□□□□□ -2.01
NEDD4P46934 SNORA40C-201ENST00000391285 128 ntBASIC2.5□□□□□ -2.01
NEDD4P46934 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
NEDD4P46934 MIR1261-201ENST00000408659 82 ntBASIC2.5□□□□□ -2.01
NEDD4P46934 USP9YP27-201ENST00000418455 438 ntBASIC2.5□□□□□ -2.01
NEDD4P46934 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.5□□□□□ -2.01
NEDD4P46934 NDUFB1P2-201ENST00000449477 176 ntBASIC2.5□□□□□ -2.01
NEDD4P46934 AL162395.1-201ENST00000457882 422 ntBASIC2.5□□□□□ -2.01
NEDD4P46934 RNU6-261P-201ENST00000459506 102 ntBASIC2.5□□□□□ -2.01
NEDD4P46934 AC009901.1-201ENST00000506703 541 ntBASIC2.5□□□□□ -2.01
NEDD4P46934 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.5□□□□□ -2.01
NEDD4P46934 AC009646.1-201ENST00000510455 318 ntBASIC2.5□□□□□ -2.01
NEDD4P46934 SNORA40.12-201ENST00000516329 111 ntBASIC2.5□□□□□ -2.01
NEDD4P46934 RN7SKP219-201ENST00000516825 296 ntBASIC2.5□□□□□ -2.01
NEDD4P46934 SNORA31.19-201ENST00000517079 126 ntBASIC2.5□□□□□ -2.01
NEDD4P46934 LINC00933-203ENST00000559812 219 ntBASIC2.5□□□□□ -2.01
NEDD4P46934 MIR4782-201ENST00000577987 79 ntBASIC2.5□□□□□ -2.01
NEDD4P46934 AC005498.1-201ENST00000592125 465 ntBASIC2.5□□□□□ -2.01
NEDD4P46934 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.5□□□□□ -2.01
NEDD4P46934 AL049779.4-201ENST00000604500 156 ntBASIC2.5□□□□□ -2.01
NEDD4P46934 AC084782.3-201ENST00000612282 578 ntBASIC2.5□□□□□ -2.01
NEDD4P46934 MIR6715A-201ENST00000615929 79 ntBASIC2.5□□□□□ -2.01
NEDD4P46934 MIR3199-2-201ENST00000636243 86 ntBASIC2.5□□□□□ -2.01
NEDD4P46934 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
NEDD4P46934 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.5□□□□□ -2.01
NEDD4P46934 Y_RNA.255-201ENST00000364581 97 ntBASIC2.49□□□□□ -2.01
NEDD4P46934 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
NEDD4P46934 RNU6-1215P-201ENST00000384441 102 ntBASIC2.49□□□□□ -2.01
NEDD4P46934 SNORA48.3-201ENST00000391081 134 ntBASIC2.49□□□□□ -2.01
NEDD4P46934 CALM2P3-201ENST00000400429 449 ntBASIC2.49□□□□□ -2.01
NEDD4P46934 AL079342.1-201ENST00000401460 267 ntBASIC2.49□□□□□ -2.01
NEDD4P46934 UBE2V1P10-201ENST00000414685 269 ntBASIC2.49□□□□□ -2.01
NEDD4P46934 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.49□□□□□ -2.01
NEDD4P46934 Z98742.2-201ENST00000431564 187 ntBASIC2.49□□□□□ -2.01
NEDD4P46934 AL606489.2-201ENST00000433886 234 ntBASIC2.49□□□□□ -2.01
NEDD4P46934 RPS15AP5-201ENST00000436276 388 ntBASIC2.49□□□□□ -2.01
NEDD4P46934 AL078601.1-201ENST00000444542 271 ntBASIC2.49□□□□□ -2.01
NEDD4P46934 HMGN2P10-201ENST00000448085 265 ntBASIC2.49□□□□□ -2.01
NEDD4P46934 AC022493.1-201ENST00000492984 337 ntBASIC2.49□□□□□ -2.01
NEDD4P46934 AC019235.1-201ENST00000503847 207 ntBASIC2.49□□□□□ -2.01
NEDD4P46934 AC092436.1-201ENST00000506450 503 ntBASIC2.49□□□□□ -2.01
NEDD4P46934 AC008716.1-201ENST00000511084 513 ntBASIC2.49□□□□□ -2.01
NEDD4P46934 Y_RNA.693-201ENST00000516641 110 ntBASIC2.49□□□□□ -2.01
NEDD4P46934 RNU6-572P-201ENST00000516724 80 ntBASIC2.49□□□□□ -2.01
NEDD4P46934 RNU6-1183P-201ENST00000517054 60 ntBASIC2.49□□□□□ -2.01
NEDD4P46934 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.49□□□□□ -2.01
NEDD4P46934 AP005435.4-201ENST00000529514 284 ntBASIC2.49□□□□□ -2.01
NEDD4P46934 AC016957.1-201ENST00000534895 309 ntBASIC2.49□□□□□ -2.01
NEDD4P46934 MIR4446-201ENST00000578505 67 ntBASIC2.49□□□□□ -2.01
NEDD4P46934 MTATP6P3-201ENST00000581686 676 ntBASIC2.49□□□□□ -2.01
NEDD4P46934 AC068790.6-201ENST00000602558 258 ntBASIC2.49□□□□□ -2.01
NEDD4P46934 AP001596.2-201ENST00000608410 312 ntBASIC2.49□□□□□ -2.01
NEDD4P46934 U4.5-201ENST00000617137 123 ntBASIC2.49□□□□□ -2.01
NEDD4P46934 AL354950.2-201ENST00000617939 290 ntBASIC2.49□□□□□ -2.01
NEDD4P46934 AC110079.1-202ENST00000635213 138 ntBASIC2.49□□□□□ -2.01
NEDD4P46934 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.49□□□□□ -2.01
NEDD4P46934 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
NEDD4P46934 HSPA8P4-201ENST00000511877 1920 ntBASIC2.49□□□□□ -2.01
NEDD4P46934 Y_RNA.6-201ENST00000362350 114 ntBASIC2.48□□□□□ -2.01
NEDD4P46934 Y_RNA.409-201ENST00000383990 98 ntBASIC2.48□□□□□ -2.01
NEDD4P46934 RNU6-192P-201ENST00000391253 100 ntBASIC2.48□□□□□ -2.01
NEDD4P46934 RNU6-903P-201ENST00000391270 109 ntBASIC2.48□□□□□ -2.01
NEDD4P46934 AC068050.1-201ENST00000394891 380 ntBASIC2.48□□□□□ -2.01
NEDD4P46934 AL356057.2-201ENST00000403318 432 ntBASIC2.48□□□□□ -2.01
NEDD4P46934 RN7SKP192-201ENST00000411291 327 ntBASIC2.48□□□□□ -2.01
NEDD4P46934 AC023141.4-201ENST00000412031 328 ntBASIC2.48□□□□□ -2.01
NEDD4P46934 EEF1A1P40-201ENST00000412883 573 ntBASIC2.48□□□□□ -2.01
NEDD4P46934 AC096649.2-201ENST00000416186 393 ntBASIC2.48□□□□□ -2.01
NEDD4P46934 DPH3P2-201ENST00000422618 250 ntBASIC2.48□□□□□ -2.01
NEDD4P46934 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
NEDD4P46934 AC007560.1-201ENST00000426912 237 ntBASIC2.48□□□□□ -2.01
NEDD4P46934 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.48□□□□□ -2.01
NEDD4P46934 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.48□□□□□ -2.01
NEDD4P46934 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.48□□□□□ -2.01
NEDD4P46934 AC073415.1-201ENST00000449240 153 ntBASIC2.48□□□□□ -2.01
NEDD4P46934 HMGB1P30-201ENST00000492455 606 ntBASIC2.48□□□□□ -2.01
NEDD4P46934 RPS27P26-201ENST00000494583 239 ntBASIC2.48□□□□□ -2.01
NEDD4P46934 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.48□□□□□ -2.01
NEDD4P46934 RNU6-314P-201ENST00000516574 104 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms