Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 AL442163.3-201ENST00000554110 156 ntBASIC4.07□□□□□ -1.76
CCNFP41002 MIR3138-201ENST00000585238 82 ntBASIC4.07□□□□□ -1.76
CCNFP41002 AC024153.1-201ENST00000603103 365 ntBASIC4.07□□□□□ -1.76
CCNFP41002 AC110741.2-201ENST00000605278 268 ntBASIC4.07□□□□□ -1.76
CCNFP41002 MIR6716-201ENST00000613413 80 ntBASIC4.07□□□□□ -1.76
CCNFP41002 AF117829.1-206ENST00000621883 3802 ntBASIC4.07□□□□□ -1.76
CCNFP41002 AC243829.7-201ENST00000633081 225 ntBASIC4.07□□□□□ -1.76
CCNFP41002 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.07□□□□□ -1.76
CCNFP41002 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCNFP41002 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.07□□□□□ -1.76
CCNFP41002 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.07□□□□□ -1.76
CCNFP41002 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCNFP41002 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CCNFP41002 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCNFP41002 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCNFP41002 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCNFP41002 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCNFP41002 AC126755.2-208ENST00000327792 462 ntBASIC4.06□□□□□ -1.76
CCNFP41002 AC138969.1-213ENST00000331436 462 ntBASIC4.06□□□□□ -1.76
CCNFP41002 RNU6-778P-201ENST00000363269 103 ntBASIC4.06□□□□□ -1.76
CCNFP41002 AC068538.1-201ENST00000376856 336 ntBASIC4.06□□□□□ -1.76
CCNFP41002 Y_RNA.458-201ENST00000384240 102 ntBASIC4.06□□□□□ -1.76
CCNFP41002 RNU6-611P-201ENST00000384276 104 ntBASIC4.06□□□□□ -1.76
CCNFP41002 RPS4XP3-201ENST00000398541 413 ntBASIC4.06□□□□□ -1.76
CCNFP41002 MIR888-201ENST00000401186 77 ntBASIC4.06□□□□□ -1.76
CCNFP41002 RHEBP3-201ENST00000411920 351 ntBASIC4.06□□□□□ -1.76
CCNFP41002 HSPE1P12-201ENST00000412576 301 ntBASIC4.06□□□□□ -1.76
CCNFP41002 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.06□□□□□ -1.76
CCNFP41002 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC4.06□□□□□ -1.76
CCNFP41002 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.06□□□□□ -1.76
CCNFP41002 AC098831.1-201ENST00000440661 216 ntBASIC4.06□□□□□ -1.76
CCNFP41002 AC006011.1-201ENST00000442758 349 ntBASIC4.06□□□□□ -1.76
CCNFP41002 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC4.06□□□□□ -1.76
CCNFP41002 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.06□□□□□ -1.76
CCNFP41002 snoU13.30-201ENST00000458951 104 ntBASIC4.06□□□□□ -1.76
CCNFP41002 U8.22-201ENST00000459141 133 ntBASIC4.06□□□□□ -1.76
CCNFP41002 RPL23AP14-201ENST00000468281 468 ntBASIC4.06□□□□□ -1.76
CCNFP41002 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCNFP41002 Y_RNA.673-201ENST00000516306 88 ntBASIC4.06□□□□□ -1.76
CCNFP41002 RNU6-928P-201ENST00000516876 104 ntBASIC4.06□□□□□ -1.76
CCNFP41002 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC4.06□□□□□ -1.76
CCNFP41002 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.06□□□□□ -1.76
CCNFP41002 AC011602.1-201ENST00000546484 331 ntBASIC4.06□□□□□ -1.76
CCNFP41002 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.06□□□□□ -1.76
CCNFP41002 AC093023.1-201ENST00000547375 507 ntBASIC4.06□□□□□ -1.76
CCNFP41002 ARF4P1-201ENST00000605447 541 ntBASIC4.06□□□□□ -1.76
CCNFP41002 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.06□□□□□ -1.76
CCNFP41002 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.06□□□□□ -1.76
CCNFP41002 MIR7151-201ENST00000617477 60 ntBASIC4.06□□□□□ -1.76
CCNFP41002 AL445567.2-201ENST00000618935 498 ntBASIC4.06□□□□□ -1.76
CCNFP41002 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
CCNFP41002 U2.21-201ENST00000637295 81 ntBASIC4.06□□□□□ -1.76
CCNFP41002 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCNFP41002 UBE3AP2-201ENST00000429033 2259 ntBASIC4.06□□□□□ -1.76
CCNFP41002 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCNFP41002 SRP72P2-201ENST00000344851 1979 ntBASIC4.05□□□□□ -1.76
CCNFP41002 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC4.05□□□□□ -1.76
CCNFP41002 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCNFP41002 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CCNFP41002 RNU6-212P-201ENST00000362642 104 ntBASIC4.05□□□□□ -1.76
CCNFP41002 SNORD56.1-201ENST00000362913 68 ntBASIC4.05□□□□□ -1.76
CCNFP41002 RNU4-9P-201ENST00000364951 139 ntBASIC4.05□□□□□ -1.76
CCNFP41002 RNU1-140P-201ENST00000365040 165 ntBASIC4.05□□□□□ -1.76
CCNFP41002 MIR518D-201ENST00000385014 87 ntBASIC4.05□□□□□ -1.76
CCNFP41002 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.05□□□□□ -1.76
CCNFP41002 RNU6-121P-201ENST00000410525 99 ntBASIC4.05□□□□□ -1.76
CCNFP41002 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.05□□□□□ -1.76
CCNFP41002 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.05□□□□□ -1.76
CCNFP41002 SNORA71B-202ENST00000439232 272 ntBASIC4.05□□□□□ -1.76
CCNFP41002 NUTF2P3-201ENST00000448540 384 ntBASIC4.05□□□□□ -1.76
CCNFP41002 MTND4LP30-201ENST00000454092 297 ntBASIC4.05□□□□□ -1.76
CCNFP41002 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
CCNFP41002 RN7SL271P-201ENST00000487601 295 ntBASIC4.05□□□□□ -1.76
CCNFP41002 ANXA2P1-201ENST00000505539 926 ntBASIC4.05□□□□□ -1.76
CCNFP41002 AC022868.1-201ENST00000517767 391 ntBASIC4.05□□□□□ -1.76
CCNFP41002 HIGD1AP1-201ENST00000550979 275 ntBASIC4.05□□□□□ -1.76
CCNFP41002 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.05□□□□□ -1.76
CCNFP41002 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.05□□□□□ -1.76
CCNFP41002 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.05□□□□□ -1.76
CCNFP41002 MIR6076-201ENST00000617521 113 ntBASIC4.05□□□□□ -1.76
CCNFP41002 SDR42E1P4-201ENST00000620894 481 ntBASIC4.05□□□□□ -1.76
CCNFP41002 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.05□□□□□ -1.76
CCNFP41002 U6.92-201ENST00000636464 89 ntBASIC4.05□□□□□ -1.76
CCNFP41002 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCNFP41002 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.04□□□□□ -1.76
CCNFP41002 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCNFP41002 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.04□□□□□ -1.76
CCNFP41002 SNORA60-201ENST00000362396 134 ntBASIC4.04□□□□□ -1.76
CCNFP41002 RNU6-222P-201ENST00000362438 107 ntBASIC4.04□□□□□ -1.76
CCNFP41002 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCNFP41002 Y_RNA.439-201ENST00000384119 94 ntBASIC4.04□□□□□ -1.76
CCNFP41002 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCNFP41002 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.04□□□□□ -1.76
CCNFP41002 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.04□□□□□ -1.76
CCNFP41002 CYCSP32-201ENST00000440548 321 ntBASIC4.04□□□□□ -1.76
CCNFP41002 AC009296.1-201ENST00000443146 155 ntBASIC4.04□□□□□ -1.76
CCNFP41002 AC125238.1-201ENST00000448842 249 ntBASIC4.04□□□□□ -1.76
CCNFP41002 AC010618.1-201ENST00000469924 477 ntBASIC4.04□□□□□ -1.76
CCNFP41002 RPS29P20-201ENST00000489592 171 ntBASIC4.04□□□□□ -1.76
CCNFP41002 RN7SL604P-201ENST00000492589 296 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms