Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 AC098934.3-201ENST00000430450 190 ntBASIC0.27□□□□□ -2.37
SNCAP37840 RNU6-889P-201ENST00000517189 103 ntBASIC0.27□□□□□ -2.37
SNCAP37840 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC0.27□□□□□ -2.37
SNCAP37840 AC018630.3-201ENST00000542637 96 ntBASIC0.27□□□□□ -2.37
SNCAP37840 MIR5000-201ENST00000577717 103 ntBASIC0.27□□□□□ -2.37
SNCAP37840 AC115989.2-201ENST00000578640 563 ntBASIC0.27□□□□□ -2.37
SNCAP37840 MIR4452-201ENST00000583004 71 ntBASIC0.27□□□□□ -2.37
SNCAP37840 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC0.27□□□□□ -2.37
SNCAP37840 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC0.27□□□□□ -2.37
SNCAP37840 AC016727.2-201ENST00000603988 621 ntBASIC0.27□□□□□ -2.37
SNCAP37840 AC104465.1-201ENST00000611365 139 ntBASIC0.27□□□□□ -2.37
SNCAP37840 AC130324.3-201ENST00000614165 542 ntBASIC0.27□□□□□ -2.37
SNCAP37840 MIR6788-201ENST00000618842 66 ntBASIC0.27□□□□□ -2.37
SNCAP37840 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.27□□□□□ -2.37
SNCAP37840 RNA5SP361-201ENST00000362686 118 ntBASIC0.26□□□□□ -2.37
SNCAP37840 RNU6-1274P-201ENST00000384557 107 ntBASIC0.26□□□□□ -2.37
SNCAP37840 RNU6-658P-201ENST00000384606 106 ntBASIC0.26□□□□□ -2.37
SNCAP37840 RPS3AP1-201ENST00000413190 320 ntBASIC0.26□□□□□ -2.37
SNCAP37840 MTND2P5-201ENST00000432656 1006 ntBASIC0.26□□□□□ -2.37
SNCAP37840 AL050341.1-201ENST00000447743 313 ntBASIC0.26□□□□□ -2.37
SNCAP37840 SNORD124-201ENST00000459577 104 ntBASIC0.26□□□□□ -2.37
SNCAP37840 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.26□□□□□ -2.37
SNCAP37840 AC018659.1-201ENST00000551083 169 ntBASIC0.26□□□□□ -2.37
SNCAP37840 AC136619.2-201ENST00000563361 631 ntBASIC0.26□□□□□ -2.37
SNCAP37840 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.26□□□□□ -2.37
SNCAP37840 ELL2P3-201ENST00000457883 1602 ntBASIC0.25□□□□□ -2.37
SNCAP37840 MIR200A-201ENST00000384875 90 ntBASIC0.25□□□□□ -2.37
SNCAP37840 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.25□□□□□ -2.37
SNCAP37840 AL591212.2-201ENST00000433923 257 ntBASIC0.25□□□□□ -2.37
SNCAP37840 AC098869.1-201ENST00000481627 292 ntBASIC0.25□□□□□ -2.37
SNCAP37840 AC002350.1-201ENST00000490759 375 ntBASIC0.25□□□□□ -2.37
SNCAP37840 AC010460.2-201ENST00000509054 677 ntBASIC0.25□□□□□ -2.37
SNCAP37840 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.25□□□□□ -2.37
SNCAP37840 AC074344.1-201ENST00000512823 224 ntBASIC0.25□□□□□ -2.37
SNCAP37840 RNA5SP503-201ENST00000517047 117 ntBASIC0.25□□□□□ -2.37
SNCAP37840 SNORA70.22-201ENST00000517160 124 ntBASIC0.25□□□□□ -2.37
SNCAP37840 AC006518.2-201ENST00000542513 940 ntBASIC0.25□□□□□ -2.37
SNCAP37840 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.25□□□□□ -2.37
SNCAP37840 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.25□□□□□ -2.37
SNCAP37840 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.25□□□□□ -2.37
SNCAP37840 MIR151B-201ENST00000584249 96 ntBASIC0.25□□□□□ -2.37
SNCAP37840 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.25□□□□□ -2.37
SNCAP37840 AC004908.3-201ENST00000610248 625 ntBASIC0.25□□□□□ -2.37
SNCAP37840 AL133445.2-201ENST00000611191 527 ntBASIC0.25□□□□□ -2.37
SNCAP37840 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.25□□□□□ -2.37
SNCAP37840 AC004009.2-201ENST00000623016 728 ntBASIC0.25□□□□□ -2.37
SNCAP37840 AC093648.1-201ENST00000623546 606 ntBASIC0.25□□□□□ -2.37
SNCAP37840 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.25□□□□□ -2.37
SNCAP37840 FARSBP1-201ENST00000435808 1778 ntBASIC0.24□□□□□ -2.37
SNCAP37840 AL442644.1-201ENST00000454390 3105 ntBASIC0.24□□□□□ -2.37
SNCAP37840 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.24□□□□□ -2.37
SNCAP37840 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
SNCAP37840 RNU1-39P-201ENST00000383897 165 ntBASIC0.24□□□□□ -2.37
SNCAP37840 RNU6-160P-201ENST00000384591 107 ntBASIC0.24□□□□□ -2.37
SNCAP37840 CETN4P-201ENST00000432407 469 ntBASIC0.24□□□□□ -2.37
SNCAP37840 HSPE1P9-201ENST00000440046 311 ntBASIC0.24□□□□□ -2.37
SNCAP37840 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
SNCAP37840 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.24□□□□□ -2.37
SNCAP37840 AC008628.1-201ENST00000508663 265 ntBASIC0.24□□□□□ -2.37
SNCAP37840 MTCYBP40-201ENST00000509390 1135 ntBASIC0.24□□□□□ -2.37
SNCAP37840 AC067942.3-201ENST00000512025 362 ntBASIC0.24□□□□□ -2.37
SNCAP37840 RNA5SP168-201ENST00000516642 112 ntBASIC0.24□□□□□ -2.37
SNCAP37840 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC0.24□□□□□ -2.37
SNCAP37840 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC0.24□□□□□ -2.37
SNCAP37840 AC087897.1-201ENST00000550134 156 ntBASIC0.24□□□□□ -2.37
SNCAP37840 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.24□□□□□ -2.37
SNCAP37840 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.24□□□□□ -2.37
SNCAP37840 AL158211.4-201ENST00000606988 584 ntBASIC0.24□□□□□ -2.37
SNCAP37840 AC243829.6-201ENST00000612652 106 ntBASIC0.24□□□□□ -2.37
SNCAP37840 MIR6134-201ENST00000617606 109 ntBASIC0.24□□□□□ -2.37
SNCAP37840 AC243829.3-201ENST00000622177 108 ntBASIC0.24□□□□□ -2.37
SNCAP37840 MIR194-1-201ENST00000384892 85 ntBASIC0.23□□□□□ -2.37
SNCAP37840 MIR525-201ENST00000384978 85 ntBASIC0.23□□□□□ -2.37
SNCAP37840 AL139397.2-201ENST00000404529 772 ntBASIC0.23□□□□□ -2.37
SNCAP37840 FTH1P15-201ENST00000406984 280 ntBASIC0.23□□□□□ -2.37
SNCAP37840 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC0.23□□□□□ -2.37
SNCAP37840 AL929288.2-201ENST00000446368 407 ntBASIC0.23□□□□□ -2.37
SNCAP37840 AL096829.2-201ENST00000446582 742 ntBASIC0.23□□□□□ -2.37
SNCAP37840 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.23□□□□□ -2.37
SNCAP37840 MTCO1P31-201ENST00000506355 492 ntBASIC0.23□□□□□ -2.37
SNCAP37840 AC093259.1-201ENST00000509755 300 ntBASIC0.23□□□□□ -2.37
SNCAP37840 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.23□□□□□ -2.37
SNCAP37840 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC0.23□□□□□ -2.37
SNCAP37840 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC0.23□□□□□ -2.37
SNCAP37840 AL512605.2-201ENST00000592972 256 ntBASIC0.23□□□□□ -2.37
SNCAP37840 AC107952.2-201ENST00000606048 486 ntBASIC0.23□□□□□ -2.37
SNCAP37840 AC034229.4-201ENST00000607861 441 ntBASIC0.23□□□□□ -2.37
SNCAP37840 AL365434.2-201ENST00000607979 234 ntBASIC0.23□□□□□ -2.37
SNCAP37840 AC009237.15-201ENST00000610252 501 ntBASIC0.23□□□□□ -2.37
SNCAP37840 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.23□□□□□ -2.37
SNCAP37840 AL590396.4-201ENST00000636779 956 ntBASIC0.23□□□□□ -2.37
SNCAP37840 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
SNCAP37840 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.22□□□□□ -2.37
SNCAP37840 AL391994.1-201ENST00000254724 282 ntBASIC0.22□□□□□ -2.37
SNCAP37840 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
SNCAP37840 U3.8-201ENST00000363675 217 ntBASIC0.22□□□□□ -2.37
SNCAP37840 SNORA25.9-201ENST00000365087 128 ntBASIC0.22□□□□□ -2.37
SNCAP37840 MIR16-1-201ENST00000385271 89 ntBASIC0.22□□□□□ -2.37
SNCAP37840 SNORD12-201ENST00000391002 90 ntBASIC0.22□□□□□ -2.37
SNCAP37840 AC010153.1-201ENST00000432862 727 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms