Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 RNY1P12-201ENST00000364251 105 ntBASIC1.89□□□□□ -2.11
FDFT1P37268 RNA5SP126-201ENST00000365092 109 ntBASIC1.89□□□□□ -2.11
FDFT1P37268 SNORA24.1-201ENST00000384401 135 ntBASIC1.89□□□□□ -2.11
FDFT1P37268 MIR558-201ENST00000384920 94 ntBASIC1.89□□□□□ -2.11
FDFT1P37268 RPL23AP32-201ENST00000395315 459 ntBASIC1.89□□□□□ -2.11
FDFT1P37268 Y_RNA.598-201ENST00000410480 95 ntBASIC1.89□□□□□ -2.11
FDFT1P37268 RNU2-8P-201ENST00000410727 190 ntBASIC1.89□□□□□ -2.11
FDFT1P37268 Z99497.1-201ENST00000421282 135 ntBASIC1.89□□□□□ -2.11
FDFT1P37268 MTND4P20-201ENST00000424125 869 ntBASIC1.89□□□□□ -2.11
FDFT1P37268 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.89□□□□□ -2.11
FDFT1P37268 AL627311.1-201ENST00000431514 115 ntBASIC1.89□□□□□ -2.11
FDFT1P37268 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.89□□□□□ -2.11
FDFT1P37268 AL353689.1-201ENST00000438895 199 ntBASIC1.89□□□□□ -2.11
FDFT1P37268 MTND1P30-201ENST00000441241 901 ntBASIC1.89□□□□□ -2.11
FDFT1P37268 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC1.89□□□□□ -2.11
FDFT1P37268 RPL23AP3-201ENST00000453844 468 ntBASIC1.89□□□□□ -2.11
FDFT1P37268 BZW1P2-201ENST00000473537 826 ntBASIC1.89□□□□□ -2.11
FDFT1P37268 MED28P2-201ENST00000475771 317 ntBASIC1.89□□□□□ -2.11
FDFT1P37268 AC018868.1-201ENST00000491307 315 ntBASIC1.89□□□□□ -2.11
FDFT1P37268 ANXA2P1-201ENST00000505539 926 ntBASIC1.89□□□□□ -2.11
FDFT1P37268 AC112206.3-201ENST00000514578 389 ntBASIC1.89□□□□□ -2.11
FDFT1P37268 RNU6-232P-201ENST00000517144 64 ntBASIC1.89□□□□□ -2.11
FDFT1P37268 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.89□□□□□ -2.11
FDFT1P37268 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.89□□□□□ -2.11
FDFT1P37268 MIR548AB-201ENST00000584917 84 ntBASIC1.89□□□□□ -2.11
FDFT1P37268 MIR548AC-201ENST00000585049 88 ntBASIC1.89□□□□□ -2.11
FDFT1P37268 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
FDFT1P37268 AC009977.1-201ENST00000586015 570 ntBASIC1.89□□□□□ -2.11
FDFT1P37268 AC018638.7-201ENST00000605836 1114 ntBASIC1.89□□□□□ -2.11
FDFT1P37268 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.89□□□□□ -2.11
FDFT1P37268 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
FDFT1P37268 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
FDFT1P37268 RNU6-1179P-201ENST00000384667 107 ntBASIC1.88□□□□□ -2.11
FDFT1P37268 MIR10A-201ENST00000385043 110 ntBASIC1.88□□□□□ -2.11
FDFT1P37268 RPS3AP36-201ENST00000398190 775 ntBASIC1.88□□□□□ -2.11
FDFT1P37268 AC019129.1-201ENST00000403786 261 ntBASIC1.88□□□□□ -2.11
FDFT1P37268 RNA5SP111-201ENST00000411386 101 ntBASIC1.88□□□□□ -2.11
FDFT1P37268 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.88□□□□□ -2.11
FDFT1P37268 MED13P1-201ENST00000428342 171 ntBASIC1.88□□□□□ -2.11
FDFT1P37268 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.88□□□□□ -2.11
FDFT1P37268 DNAJC19P4-201ENST00000440115 345 ntBASIC1.88□□□□□ -2.11
FDFT1P37268 RPL32P28-201ENST00000443577 397 ntBASIC1.88□□□□□ -2.11
FDFT1P37268 TAF9P1-201ENST00000445421 515 ntBASIC1.88□□□□□ -2.11
FDFT1P37268 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.88□□□□□ -2.11
FDFT1P37268 TAF9P2-201ENST00000454958 515 ntBASIC1.88□□□□□ -2.11
FDFT1P37268 HMGB1P35-201ENST00000503360 598 ntBASIC1.88□□□□□ -2.11
FDFT1P37268 MRPS17P9-201ENST00000511924 393 ntBASIC1.88□□□□□ -2.11
FDFT1P37268 AC022616.3-201ENST00000523940 148 ntBASIC1.88□□□□□ -2.11
FDFT1P37268 NDUFA5P6-201ENST00000542110 379 ntBASIC1.88□□□□□ -2.11
FDFT1P37268 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.88□□□□□ -2.11
FDFT1P37268 MIR4648-201ENST00000580107 72 ntBASIC1.88□□□□□ -2.11
FDFT1P37268 AC005771.1-201ENST00000585581 349 ntBASIC1.88□□□□□ -2.11
FDFT1P37268 AC092354.1-201ENST00000606057 376 ntBASIC1.88□□□□□ -2.11
FDFT1P37268 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.88□□□□□ -2.11
FDFT1P37268 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.88□□□□□ -2.11
FDFT1P37268 AC093788.1-201ENST00000609356 927 ntBASIC1.88□□□□□ -2.11
FDFT1P37268 AF246928.1-201ENST00000623768 87 ntBASIC1.88□□□□□ -2.11
FDFT1P37268 RBBP8P1-201ENST00000449447 1844 ntBASIC1.88□□□□□ -2.11
FDFT1P37268 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.88□□□□□ -2.11
FDFT1P37268 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
FDFT1P37268 ZNF702P-202ENST00000434269 1966 ntBASIC1.87□□□□□ -2.11
FDFT1P37268 U3.13-201ENST00000364804 214 ntBASIC1.87□□□□□ -2.11
FDFT1P37268 SNORA20.2-201ENST00000383922 131 ntBASIC1.87□□□□□ -2.11
FDFT1P37268 RNU6-72P-201ENST00000384285 79 ntBASIC1.87□□□□□ -2.11
FDFT1P37268 AL031577.2-201ENST00000404133 280 ntBASIC1.87□□□□□ -2.11
FDFT1P37268 RNA5SP450-201ENST00000411206 102 ntBASIC1.87□□□□□ -2.11
FDFT1P37268 AC096920.1-201ENST00000423991 241 ntBASIC1.87□□□□□ -2.11
FDFT1P37268 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.87□□□□□ -2.11
FDFT1P37268 MTND5P25-201ENST00000430499 799 ntBASIC1.87□□□□□ -2.11
FDFT1P37268 PMCHL2-203ENST00000457791 237 ntBASIC1.87□□□□□ -2.11
FDFT1P37268 RBBP4P6-201ENST00000508098 202 ntBASIC1.87□□□□□ -2.11
FDFT1P37268 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.87□□□□□ -2.11
FDFT1P37268 FABP5P5-201ENST00000515537 406 ntBASIC1.87□□□□□ -2.11
FDFT1P37268 RNU6-759P-201ENST00000516740 103 ntBASIC1.87□□□□□ -2.11
FDFT1P37268 RNU2-44P-201ENST00000516795 194 ntBASIC1.87□□□□□ -2.11
FDFT1P37268 AC106038.2-201ENST00000520706 568 ntBASIC1.87□□□□□ -2.11
FDFT1P37268 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.87□□□□□ -2.11
FDFT1P37268 MTCYBP33-201ENST00000575007 1130 ntBASIC1.87□□□□□ -2.11
FDFT1P37268 AC026271.5-201ENST00000577873 130 ntBASIC1.87□□□□□ -2.11
FDFT1P37268 MIR4298-201ENST00000584380 73 ntBASIC1.87□□□□□ -2.11
FDFT1P37268 MIR4760-201ENST00000585040 80 ntBASIC1.87□□□□□ -2.11
FDFT1P37268 BNIP3P30-201ENST00000601184 574 ntBASIC1.87□□□□□ -2.11
FDFT1P37268 AC012065.4-201ENST00000602445 679 ntBASIC1.87□□□□□ -2.11
FDFT1P37268 AL451064.1-201ENST00000607718 471 ntBASIC1.87□□□□□ -2.11
FDFT1P37268 AC012360.2-201ENST00000609349 391 ntBASIC1.87□□□□□ -2.11
FDFT1P37268 AC013412.1-201ENST00000610687 192 ntBASIC1.87□□□□□ -2.11
FDFT1P37268 AC022202.1-201ENST00000613515 211 ntBASIC1.87□□□□□ -2.11
FDFT1P37268 AC122133.1-201ENST00000613964 233 ntBASIC1.87□□□□□ -2.11
FDFT1P37268 AL133173.2-201ENST00000614270 90 ntBASIC1.87□□□□□ -2.11
FDFT1P37268 AC079248.2-201ENST00000623779 326 ntBASIC1.87□□□□□ -2.11
FDFT1P37268 AL157786.1-207ENST00000627771 695 ntBASIC1.87□□□□□ -2.11
FDFT1P37268 MTND4P4-201ENST00000439033 1366 ntBASIC1.86□□□□□ -2.11
FDFT1P37268 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.86□□□□□ -2.11
FDFT1P37268 AL354685.2-201ENST00000448218 1447 ntBASIC1.86□□□□□ -2.11
FDFT1P37268 RNU6-1010P-201ENST00000362757 107 ntBASIC1.86□□□□□ -2.11
FDFT1P37268 RNU6-553P-201ENST00000364047 96 ntBASIC1.86□□□□□ -2.11
FDFT1P37268 SNORD14B-201ENST00000364533 90 ntBASIC1.86□□□□□ -2.11
FDFT1P37268 RNU6-487P-201ENST00000365430 104 ntBASIC1.86□□□□□ -2.11
FDFT1P37268 RNU6-1032P-201ENST00000384100 107 ntBASIC1.86□□□□□ -2.11
FDFT1P37268 RNU1-57P-201ENST00000384491 166 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms