Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.91□□□□□ -2.1
RORAP35398 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
RORAP35398 AC073343.1-201ENST00000328239 651 ntBASIC1.9□□□□□ -2.11
RORAP35398 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
RORAP35398 SNORA24.1-201ENST00000384401 135 ntBASIC1.9□□□□□ -2.11
RORAP35398 MIR558-201ENST00000384920 94 ntBASIC1.9□□□□□ -2.11
RORAP35398 AL031577.2-201ENST00000404133 280 ntBASIC1.9□□□□□ -2.11
RORAP35398 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.9□□□□□ -2.11
RORAP35398 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.9□□□□□ -2.11
RORAP35398 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.9□□□□□ -2.11
RORAP35398 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.9□□□□□ -2.11
RORAP35398 RPL7P34-201ENST00000433316 712 ntBASIC1.9□□□□□ -2.11
RORAP35398 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.9□□□□□ -2.11
RORAP35398 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
RORAP35398 AC025033.1-201ENST00000463883 194 ntBASIC1.9□□□□□ -2.11
RORAP35398 BZW1P2-201ENST00000473537 826 ntBASIC1.9□□□□□ -2.11
RORAP35398 AC108210.2-201ENST00000503681 201 ntBASIC1.9□□□□□ -2.11
RORAP35398 AC108078.2-201ENST00000510750 236 ntBASIC1.9□□□□□ -2.11
RORAP35398 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.9□□□□□ -2.11
RORAP35398 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.9□□□□□ -2.11
RORAP35398 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.9□□□□□ -2.11
RORAP35398 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.9□□□□□ -2.11
RORAP35398 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.9□□□□□ -2.11
RORAP35398 Y_RNA.672-201ENST00000516289 104 ntBASIC1.9□□□□□ -2.11
RORAP35398 RNU2-46P-201ENST00000517038 113 ntBASIC1.9□□□□□ -2.11
RORAP35398 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.9□□□□□ -2.11
RORAP35398 AC106038.2-201ENST00000520706 568 ntBASIC1.9□□□□□ -2.11
RORAP35398 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.9□□□□□ -2.11
RORAP35398 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.9□□□□□ -2.11
RORAP35398 RNU6-91P-201ENST00000607774 107 ntBASIC1.9□□□□□ -2.11
RORAP35398 AC012409.4-201ENST00000612923 249 ntBASIC1.9□□□□□ -2.11
RORAP35398 AC009159.2-201ENST00000617603 606 ntBASIC1.9□□□□□ -2.11
RORAP35398 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
RORAP35398 AC002543.1-201ENST00000299783 1954 ntBASIC1.9□□□□□ -2.11
RORAP35398 ZNF702P-202ENST00000434269 1966 ntBASIC1.9□□□□□ -2.11
RORAP35398 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
RORAP35398 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
RORAP35398 RNU6-942P-201ENST00000363002 107 ntBASIC1.89□□□□□ -2.11
RORAP35398 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
RORAP35398 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
RORAP35398 RPL23AP32-201ENST00000395315 459 ntBASIC1.89□□□□□ -2.11
RORAP35398 MRPL42P2-201ENST00000403169 426 ntBASIC1.89□□□□□ -2.11
RORAP35398 RNU6-1140P-201ENST00000410517 106 ntBASIC1.89□□□□□ -2.11
RORAP35398 AC009518.2-201ENST00000418056 731 ntBASIC1.89□□□□□ -2.11
RORAP35398 AL365338.1-201ENST00000422282 858 ntBASIC1.89□□□□□ -2.11
RORAP35398 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.89□□□□□ -2.11
RORAP35398 AL160275.3-201ENST00000423876 471 ntBASIC1.89□□□□□ -2.11
RORAP35398 CALM2P2-201ENST00000428512 440 ntBASIC1.89□□□□□ -2.11
RORAP35398 AC104850.1-201ENST00000435940 476 ntBASIC1.89□□□□□ -2.11
RORAP35398 AL451074.3-201ENST00000437709 472 ntBASIC1.89□□□□□ -2.11
RORAP35398 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.89□□□□□ -2.11
RORAP35398 AL353689.1-201ENST00000438895 199 ntBASIC1.89□□□□□ -2.11
RORAP35398 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.89□□□□□ -2.11
RORAP35398 MTND6P13-201ENST00000443510 523 ntBASIC1.89□□□□□ -2.11
RORAP35398 RNU6-123P-201ENST00000516163 102 ntBASIC1.89□□□□□ -2.11
RORAP35398 RNU6-295P-201ENST00000516901 104 ntBASIC1.89□□□□□ -2.11
RORAP35398 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.89□□□□□ -2.11
RORAP35398 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.89□□□□□ -2.11
RORAP35398 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.89□□□□□ -2.11
RORAP35398 AC092325.1-201ENST00000566449 554 ntBASIC1.89□□□□□ -2.11
RORAP35398 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.89□□□□□ -2.11
RORAP35398 DEFB131E-202ENST00000602581 683 ntBASIC1.89□□□□□ -2.11
RORAP35398 AC009314.1-201ENST00000603871 304 ntBASIC1.89□□□□□ -2.11
RORAP35398 Z99289.3-201ENST00000605586 594 ntBASIC1.89□□□□□ -2.11
RORAP35398 AC025754.2-201ENST00000606491 432 ntBASIC1.89□□□□□ -2.11
RORAP35398 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.89□□□□□ -2.11
RORAP35398 AL359547.2-201ENST00000615810 418 ntBASIC1.89□□□□□ -2.11
RORAP35398 DUXAP9-208ENST00000622815 614 ntBASIC1.89□□□□□ -2.11
RORAP35398 AL603839.4-201ENST00000624658 1005 ntBASIC1.89□□□□□ -2.11
RORAP35398 AC008993.2-201ENST00000631744 806 ntBASIC1.89□□□□□ -2.11
RORAP35398 MTND4P4-201ENST00000439033 1366 ntBASIC1.88□□□□□ -2.11
RORAP35398 AC138393.1-203ENST00000327086 343 ntBASIC1.88□□□□□ -2.11
RORAP35398 RNA5SP276-201ENST00000362580 94 ntBASIC1.88□□□□□ -2.11
RORAP35398 U8.3-201ENST00000363321 132 ntBASIC1.88□□□□□ -2.11
RORAP35398 SNORD14B-201ENST00000364533 90 ntBASIC1.88□□□□□ -2.11
RORAP35398 MIR578-201ENST00000384828 96 ntBASIC1.88□□□□□ -2.11
RORAP35398 SNORA26.9-201ENST00000391322 122 ntBASIC1.88□□□□□ -2.11
RORAP35398 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
RORAP35398 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
RORAP35398 CISD1P1-201ENST00000393907 327 ntBASIC1.88□□□□□ -2.11
RORAP35398 RPS3AP36-201ENST00000398190 775 ntBASIC1.88□□□□□ -2.11
RORAP35398 AL356432.1-201ENST00000405809 419 ntBASIC1.88□□□□□ -2.11
RORAP35398 Y_RNA.623-201ENST00000411128 95 ntBASIC1.88□□□□□ -2.11
RORAP35398 EEF1A1P40-201ENST00000412883 573 ntBASIC1.88□□□□□ -2.11
RORAP35398 ELOCP4-201ENST00000420090 333 ntBASIC1.88□□□□□ -2.11
RORAP35398 AC027124.2-201ENST00000428249 105 ntBASIC1.88□□□□□ -2.11
RORAP35398 MED13P1-201ENST00000428342 171 ntBASIC1.88□□□□□ -2.11
RORAP35398 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.88□□□□□ -2.11
RORAP35398 RPS24P1-201ENST00000438550 371 ntBASIC1.88□□□□□ -2.11
RORAP35398 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.88□□□□□ -2.11
RORAP35398 AC007677.1-201ENST00000445757 515 ntBASIC1.88□□□□□ -2.11
RORAP35398 AL021397.1-201ENST00000451806 248 ntBASIC1.88□□□□□ -2.11
RORAP35398 ART2BP-201ENST00000453501 499 ntBASIC1.88□□□□□ -2.11
RORAP35398 AC117503.1-201ENST00000472241 394 ntBASIC1.88□□□□□ -2.11
RORAP35398 RBBP4P6-201ENST00000508098 202 ntBASIC1.88□□□□□ -2.11
RORAP35398 MTND1P22-201ENST00000510572 951 ntBASIC1.88□□□□□ -2.11
RORAP35398 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.88□□□□□ -2.11
RORAP35398 SCARNA24.1-201ENST00000516465 137 ntBASIC1.88□□□□□ -2.11
RORAP35398 RNU5B-3P-201ENST00000516601 115 ntBASIC1.88□□□□□ -2.11
RORAP35398 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 142.9 ms