Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 RNU6-685P-201ENST00000517088 95 ntBASIC1.97□□□□□ -2.09
SHMT2P34897 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.97□□□□□ -2.09
SHMT2P34897 AC068587.5-201ENST00000528506 175 ntBASIC1.97□□□□□ -2.09
SHMT2P34897 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.97□□□□□ -2.09
SHMT2P34897 AC079598.5-201ENST00000547460 117 ntBASIC1.97□□□□□ -2.09
SHMT2P34897 AC087883.1-201ENST00000551882 391 ntBASIC1.97□□□□□ -2.09
SHMT2P34897 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.97□□□□□ -2.09
SHMT2P34897 AC012213.3-201ENST00000577199 777 ntBASIC1.97□□□□□ -2.09
SHMT2P34897 MIR4298-201ENST00000584380 73 ntBASIC1.97□□□□□ -2.09
SHMT2P34897 CLIC4P2-201ENST00000601934 717 ntBASIC1.97□□□□□ -2.09
SHMT2P34897 AL138889.2-201ENST00000603883 242 ntBASIC1.97□□□□□ -2.09
SHMT2P34897 AC064872.1-201ENST00000604823 1072 ntBASIC1.97□□□□□ -2.09
SHMT2P34897 AL031601.2-202ENST00000622650 282 ntBASIC1.97□□□□□ -2.09
SHMT2P34897 AL359740.1-201ENST00000624340 592 ntBASIC1.97□□□□□ -2.09
SHMT2P34897 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
SHMT2P34897 HSPA8P4-201ENST00000511877 1920 ntBASIC1.97□□□□□ -2.09
SHMT2P34897 Z75746.1-201ENST00000440243 2080 ntBASIC1.97□□□□□ -2.09
SHMT2P34897 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.09
SHMT2P34897 SNORD114-1-201ENST00000362705 72 ntBASIC1.96□□□□□ -2.1
SHMT2P34897 U3.4-201ENST00000363352 213 ntBASIC1.96□□□□□ -2.1
SHMT2P34897 RNU6-72P-201ENST00000384285 79 ntBASIC1.96□□□□□ -2.1
SHMT2P34897 MIR10A-201ENST00000385043 110 ntBASIC1.96□□□□□ -2.1
SHMT2P34897 AL079342.1-201ENST00000401460 267 ntBASIC1.96□□□□□ -2.1
SHMT2P34897 AL133475.1-201ENST00000404414 305 ntBASIC1.96□□□□□ -2.1
SHMT2P34897 SNORD23.1-201ENST00000408212 104 ntBASIC1.96□□□□□ -2.1
SHMT2P34897 AL139156.1-201ENST00000412785 841 ntBASIC1.96□□□□□ -2.1
SHMT2P34897 MTCYBP5-201ENST00000423752 1135 ntBASIC1.96□□□□□ -2.1
SHMT2P34897 CALM2P2-201ENST00000428512 440 ntBASIC1.96□□□□□ -2.1
SHMT2P34897 PSPHP1-201ENST00000450062 261 ntBASIC1.96□□□□□ -2.1
SHMT2P34897 AL441985.1-201ENST00000457727 251 ntBASIC1.96□□□□□ -2.1
SHMT2P34897 KLF3P2-201ENST00000465138 268 ntBASIC1.96□□□□□ -2.1
SHMT2P34897 RPL36AP48-201ENST00000485521 314 ntBASIC1.96□□□□□ -2.1
SHMT2P34897 RPL22P13-201ENST00000493291 347 ntBASIC1.96□□□□□ -2.1
SHMT2P34897 RPL38P4-201ENST00000502376 214 ntBASIC1.96□□□□□ -2.1
SHMT2P34897 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.96□□□□□ -2.1
SHMT2P34897 MIR892C-201ENST00000516410 77 ntBASIC1.96□□□□□ -2.1
SHMT2P34897 SNORA18.6-201ENST00000516792 115 ntBASIC1.96□□□□□ -2.1
SHMT2P34897 RNA5SP364-201ENST00000516938 78 ntBASIC1.96□□□□□ -2.1
SHMT2P34897 RNU6-410P-201ENST00000517006 107 ntBASIC1.96□□□□□ -2.1
SHMT2P34897 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.96□□□□□ -2.1
SHMT2P34897 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.96□□□□□ -2.1
SHMT2P34897 OR5AQ1P-201ENST00000527596 927 ntBASIC1.96□□□□□ -2.1
SHMT2P34897 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.96□□□□□ -2.1
SHMT2P34897 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.96□□□□□ -2.1
SHMT2P34897 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.96□□□□□ -2.1
SHMT2P34897 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.96□□□□□ -2.1
SHMT2P34897 AC002984.1-201ENST00000591692 448 ntBASIC1.96□□□□□ -2.1
SHMT2P34897 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.96□□□□□ -2.1
SHMT2P34897 AC009314.1-201ENST00000603871 304 ntBASIC1.96□□□□□ -2.1
SHMT2P34897 APOOP1-201ENST00000604695 592 ntBASIC1.96□□□□□ -2.1
SHMT2P34897 Y_RNA.783-201ENST00000613546 102 ntBASIC1.96□□□□□ -2.1
SHMT2P34897 AC092656.1-203ENST00000624134 423 ntBASIC1.96□□□□□ -2.1
SHMT2P34897 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.96□□□□□ -2.1
SHMT2P34897 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
SHMT2P34897 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
SHMT2P34897 RNU6-942P-201ENST00000363002 107 ntBASIC1.95□□□□□ -2.1
SHMT2P34897 RNU6-384P-201ENST00000364900 104 ntBASIC1.95□□□□□ -2.1
SHMT2P34897 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
SHMT2P34897 Y_RNA.576-201ENST00000384781 102 ntBASIC1.95□□□□□ -2.1
SHMT2P34897 RNU6-387P-201ENST00000411331 105 ntBASIC1.95□□□□□ -2.1
SHMT2P34897 AC097463.2-201ENST00000421074 142 ntBASIC1.95□□□□□ -2.1
SHMT2P34897 MTCO3P5-201ENST00000433620 714 ntBASIC1.95□□□□□ -2.1
SHMT2P34897 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.95□□□□□ -2.1
SHMT2P34897 USP9YP8-201ENST00000441913 500 ntBASIC1.95□□□□□ -2.1
SHMT2P34897 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.95□□□□□ -2.1
SHMT2P34897 AC112771.1-201ENST00000463581 102 ntBASIC1.95□□□□□ -2.1
SHMT2P34897 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.95□□□□□ -2.1
SHMT2P34897 MED28P2-201ENST00000475771 317 ntBASIC1.95□□□□□ -2.1
SHMT2P34897 AC098862.1-201ENST00000504991 413 ntBASIC1.95□□□□□ -2.1
SHMT2P34897 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.95□□□□□ -2.1
SHMT2P34897 MTCO3P28-201ENST00000513351 515 ntBASIC1.95□□□□□ -2.1
SHMT2P34897 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.95□□□□□ -2.1
SHMT2P34897 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.95□□□□□ -2.1
SHMT2P34897 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.95□□□□□ -2.1
SHMT2P34897 MIR3935-201ENST00000583472 104 ntBASIC1.95□□□□□ -2.1
SHMT2P34897 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.95□□□□□ -2.1
SHMT2P34897 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
SHMT2P34897 SEPT7P9-203ENST00000604116 343 ntBASIC1.95□□□□□ -2.1
SHMT2P34897 AC116312.1-201ENST00000606841 314 ntBASIC1.95□□□□□ -2.1
SHMT2P34897 RNU6-91P-201ENST00000607774 107 ntBASIC1.95□□□□□ -2.1
SHMT2P34897 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
SHMT2P34897 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
SHMT2P34897 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SHMT2P34897 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SHMT2P34897 SNORD115-7-201ENST00000365306 82 ntBASIC1.94□□□□□ -2.1
SHMT2P34897 RNU6-108P-201ENST00000365558 107 ntBASIC1.94□□□□□ -2.1
SHMT2P34897 RNU6-74P-201ENST00000384235 107 ntBASIC1.94□□□□□ -2.1
SHMT2P34897 RNU6-1179P-201ENST00000384667 107 ntBASIC1.94□□□□□ -2.1
SHMT2P34897 MIR1261-201ENST00000408659 82 ntBASIC1.94□□□□□ -2.1
SHMT2P34897 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.94□□□□□ -2.1
SHMT2P34897 AL356379.1-201ENST00000414105 126 ntBASIC1.94□□□□□ -2.1
SHMT2P34897 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.94□□□□□ -2.1
SHMT2P34897 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.94□□□□□ -2.1
SHMT2P34897 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.94□□□□□ -2.1
SHMT2P34897 AC027124.2-201ENST00000428249 105 ntBASIC1.94□□□□□ -2.1
SHMT2P34897 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.94□□□□□ -2.1
SHMT2P34897 AC000111.3-201ENST00000433478 193 ntBASIC1.94□□□□□ -2.1
SHMT2P34897 GPR143P-201ENST00000434155 205 ntBASIC1.94□□□□□ -2.1
SHMT2P34897 AL031667.1-201ENST00000440222 725 ntBASIC1.94□□□□□ -2.1
SHMT2P34897 MTND1P26-201ENST00000440488 538 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms