Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.32□□□□□ -2.2
CASQ1P31415 Y_RNA.40-201ENST00000362645 93 ntBASIC1.31□□□□□ -2.2
CASQ1P31415 RNU6-112P-201ENST00000363599 104 ntBASIC1.31□□□□□ -2.2
CASQ1P31415 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.31□□□□□ -2.2
CASQ1P31415 AL589872.1-201ENST00000426602 288 ntBASIC1.31□□□□□ -2.2
CASQ1P31415 FTH1P12-201ENST00000432137 551 ntBASIC1.31□□□□□ -2.2
CASQ1P31415 HMGB1P31-201ENST00000437242 427 ntBASIC1.31□□□□□ -2.2
CASQ1P31415 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.31□□□□□ -2.2
CASQ1P31415 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.31□□□□□ -2.2
CASQ1P31415 NDUFAF4P2-201ENST00000445374 520 ntBASIC1.31□□□□□ -2.2
CASQ1P31415 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.31□□□□□ -2.2
CASQ1P31415 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC1.31□□□□□ -2.2
CASQ1P31415 RPL26P26-201ENST00000480251 434 ntBASIC1.31□□□□□ -2.2
CASQ1P31415 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.31□□□□□ -2.2
CASQ1P31415 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.31□□□□□ -2.2
CASQ1P31415 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.31□□□□□ -2.2
CASQ1P31415 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.31□□□□□ -2.2
CASQ1P31415 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.31□□□□□ -2.2
CASQ1P31415 AC090115.3-201ENST00000553218 849 ntBASIC1.31□□□□□ -2.2
CASQ1P31415 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.31□□□□□ -2.2
CASQ1P31415 MTCYBP33-201ENST00000575007 1130 ntBASIC1.31□□□□□ -2.2
CASQ1P31415 AP002802.2-201ENST00000605877 235 ntBASIC1.31□□□□□ -2.2
CASQ1P31415 AC092574.1-201ENST00000609771 420 ntBASIC1.31□□□□□ -2.2
CASQ1P31415 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.3□□□□□ -2.2
CASQ1P31415 RNA5SP190-201ENST00000365222 118 ntBASIC1.3□□□□□ -2.2
CASQ1P31415 Y_RNA.597-201ENST00000410463 100 ntBASIC1.3□□□□□ -2.2
CASQ1P31415 MTND4P3-201ENST00000417829 541 ntBASIC1.3□□□□□ -2.2
CASQ1P31415 MRPL35P3-201ENST00000421557 364 ntBASIC1.3□□□□□ -2.2
CASQ1P31415 EEF1E1P1-201ENST00000446998 430 ntBASIC1.3□□□□□ -2.2
CASQ1P31415 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC1.3□□□□□ -2.2
CASQ1P31415 AL353752.1-201ENST00000454946 260 ntBASIC1.3□□□□□ -2.2
CASQ1P31415 MTND1P3-201ENST00000484956 952 ntBASIC1.3□□□□□ -2.2
CASQ1P31415 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.3□□□□□ -2.2
CASQ1P31415 AC010486.1-201ENST00000511793 424 ntBASIC1.3□□□□□ -2.2
CASQ1P31415 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.3□□□□□ -2.2
CASQ1P31415 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.3□□□□□ -2.2
CASQ1P31415 AC091544.4-201ENST00000555268 342 ntBASIC1.3□□□□□ -2.2
CASQ1P31415 MIR3937-201ENST00000580135 106 ntBASIC1.3□□□□□ -2.2
CASQ1P31415 AC018926.1-201ENST00000616335 435 ntBASIC1.3□□□□□ -2.2
CASQ1P31415 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC1.3□□□□□ -2.2
CASQ1P31415 snoU2_19.1-201ENST00000362361 80 ntBASIC1.29□□□□□ -2.2
CASQ1P31415 RNU5A-8P-201ENST00000364102 114 ntBASIC1.29□□□□□ -2.2
CASQ1P31415 SNORA4.3-201ENST00000365564 137 ntBASIC1.29□□□□□ -2.2
CASQ1P31415 RNU6-395P-201ENST00000365662 106 ntBASIC1.29□□□□□ -2.2
CASQ1P31415 RNA5SP390-201ENST00000410191 113 ntBASIC1.29□□□□□ -2.2
CASQ1P31415 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.29□□□□□ -2.2
CASQ1P31415 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.29□□□□□ -2.2
CASQ1P31415 AL591212.2-201ENST00000433923 257 ntBASIC1.29□□□□□ -2.2
CASQ1P31415 MTND2P4-201ENST00000445034 1004 ntBASIC1.29□□□□□ -2.2
CASQ1P31415 AC004223.1-201ENST00000479840 271 ntBASIC1.29□□□□□ -2.2
CASQ1P31415 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.29□□□□□ -2.2
CASQ1P31415 AC087894.1-201ENST00000538359 518 ntBASIC1.29□□□□□ -2.2
CASQ1P31415 AC068880.4-201ENST00000623082 495 ntBASIC1.29□□□□□ -2.2
CASQ1P31415 MTND5P9-201ENST00000503854 1755 ntBASIC1.29□□□□□ -2.2
CASQ1P31415 RNU6-942P-201ENST00000363002 107 ntBASIC1.28□□□□□ -2.2
CASQ1P31415 SNORA62.1-201ENST00000364287 154 ntBASIC1.28□□□□□ -2.2
CASQ1P31415 FCF1P10-201ENST00000407590 479 ntBASIC1.28□□□□□ -2.2
CASQ1P31415 SNORA11-201ENST00000408789 128 ntBASIC1.28□□□□□ -2.2
CASQ1P31415 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.28□□□□□ -2.2
CASQ1P31415 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.28□□□□□ -2.2
CASQ1P31415 GDI2P2-201ENST00000445131 608 ntBASIC1.28□□□□□ -2.2
CASQ1P31415 AC130509.1-201ENST00000464158 433 ntBASIC1.28□□□□□ -2.2
CASQ1P31415 RPL36AP21-201ENST00000490372 323 ntBASIC1.28□□□□□ -2.2
CASQ1P31415 AC113347.3-201ENST00000509113 148 ntBASIC1.28□□□□□ -2.2
CASQ1P31415 RNU6-914P-201ENST00000516749 109 ntBASIC1.28□□□□□ -2.2
CASQ1P31415 AL356057.1-201ENST00000533798 831 ntBASIC1.28□□□□□ -2.2
CASQ1P31415 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC1.28□□□□□ -2.2
CASQ1P31415 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.28□□□□□ -2.2
CASQ1P31415 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.28□□□□□ -2.2
CASQ1P31415 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.28□□□□□ -2.2
CASQ1P31415 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.28□□□□□ -2.2
CASQ1P31415 AC078795.2-201ENST00000602835 1252 ntBASIC1.28□□□□□ -2.2
CASQ1P31415 AC022022.2-201ENST00000602989 360 ntBASIC1.28□□□□□ -2.2
CASQ1P31415 AC006270.3-201ENST00000605967 1036 ntBASIC1.28□□□□□ -2.2
CASQ1P31415 AC007792.1-201ENST00000623023 402 ntBASIC1.28□□□□□ -2.2
CASQ1P31415 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC1.27□□□□□ -2.21
CASQ1P31415 RNU6-224P-201ENST00000384055 107 ntBASIC1.27□□□□□ -2.21
CASQ1P31415 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.27□□□□□ -2.21
CASQ1P31415 AL357139.1-201ENST00000407792 426 ntBASIC1.27□□□□□ -2.21
CASQ1P31415 USP9YP21-201ENST00000420603 432 ntBASIC1.27□□□□□ -2.21
CASQ1P31415 AL365338.1-201ENST00000422282 858 ntBASIC1.27□□□□□ -2.21
CASQ1P31415 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.27□□□□□ -2.21
CASQ1P31415 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.27□□□□□ -2.21
CASQ1P31415 RPS15AP10-201ENST00000432472 382 ntBASIC1.27□□□□□ -2.21
CASQ1P31415 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.27□□□□□ -2.21
CASQ1P31415 MTCO1P27-201ENST00000448269 226 ntBASIC1.27□□□□□ -2.21
CASQ1P31415 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.27□□□□□ -2.21
CASQ1P31415 RNU6-333P-201ENST00000459117 107 ntBASIC1.27□□□□□ -2.21
CASQ1P31415 SUMO2P5-201ENST00000506790 245 ntBASIC1.27□□□□□ -2.21
CASQ1P31415 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.27□□□□□ -2.21
CASQ1P31415 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC1.27□□□□□ -2.21
CASQ1P31415 AC005776.1-201ENST00000603164 290 ntBASIC1.27□□□□□ -2.21
CASQ1P31415 HSPE1P19-201ENST00000603327 295 ntBASIC1.27□□□□□ -2.21
CASQ1P31415 AP000654.2-201ENST00000605633 586 ntBASIC1.27□□□□□ -2.21
CASQ1P31415 AL355472.4-201ENST00000610233 626 ntBASIC1.27□□□□□ -2.21
CASQ1P31415 AL365204.3-201ENST00000612448 685 ntBASIC1.27□□□□□ -2.21
CASQ1P31415 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.27□□□□□ -2.21
CASQ1P31415 AC100821.1-201ENST00000523153 2479 ntBASIC1.26□□□□□ -2.21
CASQ1P31415 RNA5SP327-201ENST00000362494 101 ntBASIC1.26□□□□□ -2.21
CASQ1P31415 RNU6-360P-201ENST00000390944 104 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms