Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 MIR4446-201ENST00000578505 67 ntBASIC2.9□□□□□ -1.95
HOXC13P31276 MIR5194-201ENST00000582634 120 ntBASIC2.9□□□□□ -1.95
HOXC13P31276 AC174048.1-201ENST00000603389 144 ntBASIC2.9□□□□□ -1.95
HOXC13P31276 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.9□□□□□ -1.95
HOXC13P31276 AC110994.2-201ENST00000635481 492 ntBASIC2.9□□□□□ -1.95
HOXC13P31276 MIR203B-201ENST00000636080 86 ntBASIC2.9□□□□□ -1.95
HOXC13P31276 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
HOXC13P31276 AC092593.1-201ENST00000515413 1815 ntBASIC2.9□□□□□ -1.95
HOXC13P31276 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.9□□□□□ -1.95
HOXC13P31276 AC108206.1-201ENST00000570186 4159 ntBASIC2.9□□□□□ -1.95
HOXC13P31276 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
HOXC13P31276 RNU2-8P-201ENST00000410727 190 ntBASIC2.89□□□□□ -1.95
HOXC13P31276 RNA5SP508-201ENST00000411327 119 ntBASIC2.89□□□□□ -1.95
HOXC13P31276 RNU6-195P-201ENST00000411352 109 ntBASIC2.89□□□□□ -1.95
HOXC13P31276 RPS3AP3-201ENST00000411933 242 ntBASIC2.89□□□□□ -1.95
HOXC13P31276 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.89□□□□□ -1.95
HOXC13P31276 AC007064.1-201ENST00000412238 351 ntBASIC2.89□□□□□ -1.95
HOXC13P31276 MTCO2P12-201ENST00000427426 682 ntBASIC2.89□□□□□ -1.95
HOXC13P31276 MICF-203ENST00000432679 129 ntBASIC2.89□□□□□ -1.95
HOXC13P31276 AC244505.4-201ENST00000434905 287 ntBASIC2.89□□□□□ -1.95
HOXC13P31276 RPL36AP6-201ENST00000435770 321 ntBASIC2.89□□□□□ -1.95
HOXC13P31276 SSXP5-201ENST00000443473 287 ntBASIC2.89□□□□□ -1.95
HOXC13P31276 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.89□□□□□ -1.95
HOXC13P31276 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.89□□□□□ -1.95
HOXC13P31276 SNRPFP4-201ENST00000456366 242 ntBASIC2.89□□□□□ -1.95
HOXC13P31276 MTCO2P29-201ENST00000465212 189 ntBASIC2.89□□□□□ -1.95
HOXC13P31276 AC003982.1-202ENST00000469928 248 ntBASIC2.89□□□□□ -1.95
HOXC13P31276 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.89□□□□□ -1.95
HOXC13P31276 MTND1P3-201ENST00000484956 952 ntBASIC2.89□□□□□ -1.95
HOXC13P31276 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.89□□□□□ -1.95
HOXC13P31276 YWHAEP4-201ENST00000505390 198 ntBASIC2.89□□□□□ -1.95
HOXC13P31276 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
HOXC13P31276 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.89□□□□□ -1.95
HOXC13P31276 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.89□□□□□ -1.95
HOXC13P31276 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.89□□□□□ -1.95
HOXC13P31276 RNU7-51P-201ENST00000516560 62 ntBASIC2.89□□□□□ -1.95
HOXC13P31276 RNA5SP337-201ENST00000517007 109 ntBASIC2.89□□□□□ -1.95
HOXC13P31276 AP003467.2-201ENST00000520175 319 ntBASIC2.89□□□□□ -1.95
HOXC13P31276 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.89□□□□□ -1.95
HOXC13P31276 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.89□□□□□ -1.95
HOXC13P31276 HIF1AP1-201ENST00000553642 175 ntBASIC2.89□□□□□ -1.95
HOXC13P31276 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.89□□□□□ -1.95
HOXC13P31276 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.89□□□□□ -1.95
HOXC13P31276 AC025678.1-201ENST00000567861 338 ntBASIC2.89□□□□□ -1.95
HOXC13P31276 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.89□□□□□ -1.95
HOXC13P31276 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
HOXC13P31276 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
HOXC13P31276 Z82209.1-201ENST00000422141 2135 ntBASIC2.89□□□□□ -1.95
HOXC13P31276 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.88□□□□□ -1.95
HOXC13P31276 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.88□□□□□ -1.95
HOXC13P31276 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
HOXC13P31276 Y_RNA.1-201ENST00000352915 104 ntBASIC2.88□□□□□ -1.95
HOXC13P31276 Y_RNA.132-201ENST00000363421 102 ntBASIC2.88□□□□□ -1.95
HOXC13P31276 RNU6-1085P-201ENST00000363576 107 ntBASIC2.88□□□□□ -1.95
HOXC13P31276 RNY4P34-201ENST00000364779 95 ntBASIC2.88□□□□□ -1.95
HOXC13P31276 SNORA51.4-201ENST00000364993 124 ntBASIC2.88□□□□□ -1.95
HOXC13P31276 SMIM11P1-201ENST00000369586 178 ntBASIC2.88□□□□□ -1.95
HOXC13P31276 MIR181A2-201ENST00000384863 110 ntBASIC2.88□□□□□ -1.95
HOXC13P31276 AL356057.3-201ENST00000402607 340 ntBASIC2.88□□□□□ -1.95
HOXC13P31276 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.88□□□□□ -1.95
HOXC13P31276 AL589872.1-201ENST00000426602 288 ntBASIC2.88□□□□□ -1.95
HOXC13P31276 RPL39P40-201ENST00000445481 146 ntBASIC2.88□□□□□ -1.95
HOXC13P31276 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.88□□□□□ -1.95
HOXC13P31276 GAPDHP17-201ENST00000449858 1001 ntBASIC2.88□□□□□ -1.95
HOXC13P31276 MTATP6P7-201ENST00000453315 681 ntBASIC2.88□□□□□ -1.95
HOXC13P31276 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.88□□□□□ -1.95
HOXC13P31276 RPL7P42-201ENST00000481005 679 ntBASIC2.88□□□□□ -1.95
HOXC13P31276 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.88□□□□□ -1.95
HOXC13P31276 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.88□□□□□ -1.95
HOXC13P31276 AC023141.11-201ENST00000508864 202 ntBASIC2.88□□□□□ -1.95
HOXC13P31276 RNU6-677P-201ENST00000516914 101 ntBASIC2.88□□□□□ -1.95
HOXC13P31276 AC078814.3-201ENST00000553036 491 ntBASIC2.88□□□□□ -1.95
HOXC13P31276 RPL21P5-201ENST00000554662 472 ntBASIC2.88□□□□□ -1.95
HOXC13P31276 AC024619.4-201ENST00000580924 316 ntBASIC2.88□□□□□ -1.95
HOXC13P31276 MIR4435-1-201ENST00000582552 80 ntBASIC2.88□□□□□ -1.95
HOXC13P31276 AC009977.1-201ENST00000586015 570 ntBASIC2.88□□□□□ -1.95
HOXC13P31276 AC108479.2-201ENST00000617314 601 ntBASIC2.88□□□□□ -1.95
HOXC13P31276 AL160413.1-201ENST00000622780 310 ntBASIC2.88□□□□□ -1.95
HOXC13P31276 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.88□□□□□ -1.95
HOXC13P31276 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.88□□□□□ -1.95
HOXC13P31276 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.88□□□□□ -1.95
HOXC13P31276 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.87□□□□□ -1.95
HOXC13P31276 AC080128.1-201ENST00000474389 1917 ntBASIC2.87□□□□□ -1.95
HOXC13P31276 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
HOXC13P31276 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
HOXC13P31276 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
HOXC13P31276 HSPE1P11-201ENST00000339579 310 ntBASIC2.87□□□□□ -1.95
HOXC13P31276 MIR26A1-201ENST00000362205 77 ntBASIC2.87□□□□□ -1.95
HOXC13P31276 Y_RNA.138-201ENST00000363462 102 ntBASIC2.87□□□□□ -1.95
HOXC13P31276 MIR9-1-201ENST00000385198 89 ntBASIC2.87□□□□□ -1.95
HOXC13P31276 MIR181B1-201ENST00000385240 110 ntBASIC2.87□□□□□ -1.95
HOXC13P31276 AL353729.1-201ENST00000425044 720 ntBASIC2.87□□□□□ -1.95
HOXC13P31276 ISCA1P6-201ENST00000427740 390 ntBASIC2.87□□□□□ -1.95
HOXC13P31276 USP9YP15-201ENST00000442391 422 ntBASIC2.87□□□□□ -1.95
HOXC13P31276 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.87□□□□□ -1.95
HOXC13P31276 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.87□□□□□ -1.95
HOXC13P31276 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.87□□□□□ -1.95
HOXC13P31276 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.87□□□□□ -1.95
HOXC13P31276 AL441985.1-201ENST00000457727 251 ntBASIC2.87□□□□□ -1.95
HOXC13P31276 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 134.5 ms