Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AL031274.1-201ENST00000450334 232 ntBASIC3.82□□□□□ -1.8
CNGA1P29973 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.82□□□□□ -1.8
CNGA1P29973 AC006539.3-201ENST00000454258 129 ntBASIC3.82□□□□□ -1.8
CNGA1P29973 AC130509.1-201ENST00000464158 433 ntBASIC3.82□□□□□ -1.8
CNGA1P29973 MTCYBP40-201ENST00000509390 1135 ntBASIC3.82□□□□□ -1.8
CNGA1P29973 RNU6-277P-201ENST00000516272 106 ntBASIC3.82□□□□□ -1.8
CNGA1P29973 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.82□□□□□ -1.8
CNGA1P29973 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.82□□□□□ -1.8
CNGA1P29973 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.82□□□□□ -1.8
CNGA1P29973 AC007151.1-201ENST00000572774 483 ntBASIC3.82□□□□□ -1.8
CNGA1P29973 MIR3124-201ENST00000582636 67 ntBASIC3.82□□□□□ -1.8
CNGA1P29973 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.82□□□□□ -1.8
CNGA1P29973 AL359697.1-201ENST00000624879 587 ntBASIC3.82□□□□□ -1.8
CNGA1P29973 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.82□□□□□ -1.8
CNGA1P29973 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.82□□□□□ -1.8
CNGA1P29973 AC112487.2-201ENST00000637950 304 ntBASIC3.82□□□□□ -1.8
CNGA1P29973 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
CNGA1P29973 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CNGA1P29973 AC091564.4-201ENST00000533934 2194 ntBASIC3.82□□□□□ -1.8
CNGA1P29973 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.81□□□□□ -1.8
CNGA1P29973 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CNGA1P29973 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CNGA1P29973 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.81□□□□□ -1.8
CNGA1P29973 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CNGA1P29973 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
CNGA1P29973 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
CNGA1P29973 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CNGA1P29973 RNU6-797P-201ENST00000363101 109 ntBASIC3.81□□□□□ -1.8
CNGA1P29973 SNORA80A-201ENST00000363922 136 ntBASIC3.81□□□□□ -1.8
CNGA1P29973 RNU6-750P-201ENST00000390946 107 ntBASIC3.81□□□□□ -1.8
CNGA1P29973 RN7SKP111-201ENST00000410349 271 ntBASIC3.81□□□□□ -1.8
CNGA1P29973 RN7SKP158-201ENST00000410453 326 ntBASIC3.81□□□□□ -1.8
CNGA1P29973 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.81□□□□□ -1.8
CNGA1P29973 AC096649.2-201ENST00000416186 393 ntBASIC3.81□□□□□ -1.8
CNGA1P29973 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.81□□□□□ -1.8
CNGA1P29973 MRPL42P6-201ENST00000486397 371 ntBASIC3.81□□□□□ -1.8
CNGA1P29973 AC006445.1-201ENST00000491925 405 ntBASIC3.81□□□□□ -1.8
CNGA1P29973 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.81□□□□□ -1.8
CNGA1P29973 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.81□□□□□ -1.8
CNGA1P29973 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CNGA1P29973 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.81□□□□□ -1.8
CNGA1P29973 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.81□□□□□ -1.8
CNGA1P29973 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.81□□□□□ -1.8
CNGA1P29973 AL121917.1-203ENST00000605534 577 ntBASIC3.81□□□□□ -1.8
CNGA1P29973 AC022149.2-201ENST00000621061 203 ntBASIC3.81□□□□□ -1.8
CNGA1P29973 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CNGA1P29973 AC093010.3-201ENST00000570269 15214 ntBASIC3.81□□□□□ -1.8
CNGA1P29973 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CNGA1P29973 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.8□□□□□ -1.8
CNGA1P29973 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CNGA1P29973 MFSD8-233ENST00000641482 4860 ntBASIC3.8□□□□□ -1.8
CNGA1P29973 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CNGA1P29973 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
CNGA1P29973 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CNGA1P29973 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CNGA1P29973 RNU1-105P-201ENST00000363470 161 ntBASIC3.8□□□□□ -1.8
CNGA1P29973 RNU6-827P-201ENST00000365553 106 ntBASIC3.8□□□□□ -1.8
CNGA1P29973 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CNGA1P29973 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CNGA1P29973 AL138885.1-201ENST00000405921 675 ntBASIC3.8□□□□□ -1.8
CNGA1P29973 RNU4-47P-201ENST00000410876 114 ntBASIC3.8□□□□□ -1.8
CNGA1P29973 AC074085.1-201ENST00000413598 418 ntBASIC3.8□□□□□ -1.8
CNGA1P29973 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.8□□□□□ -1.8
CNGA1P29973 RPL21P40-201ENST00000428586 483 ntBASIC3.8□□□□□ -1.8
CNGA1P29973 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.8□□□□□ -1.8
CNGA1P29973 AC107399.1-201ENST00000451226 265 ntBASIC3.8□□□□□ -1.8
CNGA1P29973 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.8□□□□□ -1.8
CNGA1P29973 DNAJC8P1-201ENST00000554535 372 ntBASIC3.8□□□□□ -1.8
CNGA1P29973 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.8□□□□□ -1.8
CNGA1P29973 AC010653.1-201ENST00000571108 881 ntBASIC3.8□□□□□ -1.8
CNGA1P29973 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.8□□□□□ -1.8
CNGA1P29973 POLR3GP2-201ENST00000588366 668 ntBASIC3.8□□□□□ -1.8
CNGA1P29973 AC091152.3-201ENST00000604227 325 ntBASIC3.8□□□□□ -1.8
CNGA1P29973 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.8□□□□□ -1.8
CNGA1P29973 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.8□□□□□ -1.8
CNGA1P29973 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CNGA1P29973 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CNGA1P29973 AC010889.1-201ENST00000566193 2666 ntBASIC3.79□□□□□ -1.8
CNGA1P29973 SNORA5B-201ENST00000363786 132 ntBASIC3.79□□□□□ -1.8
CNGA1P29973 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.79□□□□□ -1.8
CNGA1P29973 AL357552.1-201ENST00000445254 415 ntBASIC3.79□□□□□ -1.8
CNGA1P29973 FTH1P25-201ENST00000447665 469 ntBASIC3.79□□□□□ -1.8
CNGA1P29973 MTND4P17-201ENST00000470444 350 ntBASIC3.79□□□□□ -1.8
CNGA1P29973 RPS27P26-201ENST00000494583 239 ntBASIC3.79□□□□□ -1.8
CNGA1P29973 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.79□□□□□ -1.8
CNGA1P29973 AC008549.1-201ENST00000512900 643 ntBASIC3.79□□□□□ -1.8
CNGA1P29973 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.79□□□□□ -1.8
CNGA1P29973 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.79□□□□□ -1.8
CNGA1P29973 RNU6-377P-201ENST00000515965 102 ntBASIC3.79□□□□□ -1.8
CNGA1P29973 ACA59.2-201ENST00000517061 156 ntBASIC3.79□□□□□ -1.8
CNGA1P29973 CR383656.8-201ENST00000549046 145 ntBASIC3.79□□□□□ -1.8
CNGA1P29973 TRAV32-201ENST00000553993 340 ntBASIC3.79□□□□□ -1.8
CNGA1P29973 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.79□□□□□ -1.8
CNGA1P29973 MIR7106-201ENST00000612419 65 ntBASIC3.79□□□□□ -1.8
CNGA1P29973 AL137790.1-201ENST00000634283 177 ntBASIC3.79□□□□□ -1.8
CNGA1P29973 MIR1302-1-201ENST00000637932 143 ntBASIC3.79□□□□□ -1.8
CNGA1P29973 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.79□□□□□ -1.8
CNGA1P29973 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CNGA1P29973 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CNGA1P29973 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms