Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC4.71□□□□□ -1.66
RXRBP28702 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
RXRBP28702 AL356489.2-201ENST00000566968 3528 ntBASIC4.71□□□□□ -1.66
RXRBP28702 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
RXRBP28702 AC007656.2-201ENST00000624902 4547 ntBASIC4.71□□□□□ -1.66
RXRBP28702 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RXRBP28702 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
RXRBP28702 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RXRBP28702 AC018529.3-201ENST00000624212 2254 ntBASIC4.7□□□□□ -1.66
RXRBP28702 HSPA8P1-201ENST00000425843 1833 ntBASIC4.7□□□□□ -1.66
RXRBP28702 RNU1-76P-201ENST00000362903 159 ntBASIC4.7□□□□□ -1.66
RXRBP28702 Y_RNA.534-201ENST00000384599 112 ntBASIC4.7□□□□□ -1.66
RXRBP28702 AL591034.2-201ENST00000402839 359 ntBASIC4.7□□□□□ -1.66
RXRBP28702 AL357075.1-201ENST00000404107 726 ntBASIC4.7□□□□□ -1.66
RXRBP28702 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.7□□□□□ -1.66
RXRBP28702 AC092423.1-201ENST00000430165 186 ntBASIC4.7□□□□□ -1.66
RXRBP28702 AC090774.1-201ENST00000435925 246 ntBASIC4.7□□□□□ -1.66
RXRBP28702 S100A11P1-201ENST00000477525 312 ntBASIC4.7□□□□□ -1.66
RXRBP28702 AC136932.1-201ENST00000574771 208 ntBASIC4.7□□□□□ -1.66
RXRBP28702 MIR5696-201ENST00000578474 85 ntBASIC4.7□□□□□ -1.66
RXRBP28702 AC123912.5-201ENST00000605470 343 ntBASIC4.7□□□□□ -1.66
RXRBP28702 AC018692.3-201ENST00000623929 123 ntBASIC4.7□□□□□ -1.66
RXRBP28702 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.7□□□□□ -1.66
RXRBP28702 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RXRBP28702 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.7□□□□□ -1.66
RXRBP28702 AL359693.1-201ENST00000614959 2407 ntBASIC4.7□□□□□ -1.66
RXRBP28702 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.69□□□□□ -1.66
RXRBP28702 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RXRBP28702 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
RXRBP28702 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RXRBP28702 Y_RNA.16-201ENST00000362421 102 ntBASIC4.69□□□□□ -1.66
RXRBP28702 RNA5SP240-201ENST00000365355 128 ntBASIC4.69□□□□□ -1.66
RXRBP28702 SNORA69.1-201ENST00000390904 137 ntBASIC4.69□□□□□ -1.66
RXRBP28702 RNU6-821P-201ENST00000390995 107 ntBASIC4.69□□□□□ -1.66
RXRBP28702 MIR1298-201ENST00000408783 112 ntBASIC4.69□□□□□ -1.66
RXRBP28702 RNA5SP56-201ENST00000410277 118 ntBASIC4.69□□□□□ -1.66
RXRBP28702 RNA5SP104-201ENST00000410989 118 ntBASIC4.69□□□□□ -1.66
RXRBP28702 PPP1R11P2-201ENST00000423543 382 ntBASIC4.69□□□□□ -1.66
RXRBP28702 AC092573.2-201ENST00000434546 243 ntBASIC4.69□□□□□ -1.66
RXRBP28702 RPL23AP22-201ENST00000437556 453 ntBASIC4.69□□□□□ -1.66
RXRBP28702 AC098831.1-201ENST00000440661 216 ntBASIC4.69□□□□□ -1.66
RXRBP28702 RPL29P29-201ENST00000448725 423 ntBASIC4.69□□□□□ -1.66
RXRBP28702 AL513124.1-201ENST00000450410 614 ntBASIC4.69□□□□□ -1.66
RXRBP28702 Y_RNA.644-201ENST00000459006 113 ntBASIC4.69□□□□□ -1.66
RXRBP28702 RPS23P5-201ENST00000495419 428 ntBASIC4.69□□□□□ -1.66
RXRBP28702 Y_RNA.674-201ENST00000516362 113 ntBASIC4.69□□□□□ -1.66
RXRBP28702 RNU6-914P-201ENST00000516749 109 ntBASIC4.69□□□□□ -1.66
RXRBP28702 SNRPGP16-201ENST00000533275 226 ntBASIC4.69□□□□□ -1.66
RXRBP28702 AC008011.1-201ENST00000545989 227 ntBASIC4.69□□□□□ -1.66
RXRBP28702 AC126177.3-201ENST00000551839 688 ntBASIC4.69□□□□□ -1.66
RXRBP28702 MIR4524B-201ENST00000581569 115 ntBASIC4.69□□□□□ -1.66
RXRBP28702 AC006557.5-201ENST00000603126 811 ntBASIC4.69□□□□□ -1.66
RXRBP28702 BX284668.6-201ENST00000606899 438 ntBASIC4.69□□□□□ -1.66
RXRBP28702 SNORD39.4-201ENST00000620099 78 ntBASIC4.69□□□□□ -1.66
RXRBP28702 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC4.69□□□□□ -1.66
RXRBP28702 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RXRBP28702 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.69□□□□□ -1.66
RXRBP28702 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
RXRBP28702 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
RXRBP28702 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
RXRBP28702 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RXRBP28702 ZNF299P-201ENST00000406845 1804 ntBASIC4.68□□□□□ -1.66
RXRBP28702 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RXRBP28702 RNU4-82P-201ENST00000362443 140 ntBASIC4.68□□□□□ -1.66
RXRBP28702 Y_RNA.54-201ENST00000362766 105 ntBASIC4.68□□□□□ -1.66
RXRBP28702 RNU6-595P-201ENST00000363944 107 ntBASIC4.68□□□□□ -1.66
RXRBP28702 MT-TC-201ENST00000387405 66 ntBASIC4.68□□□□□ -1.66
RXRBP28702 MRPL35P1-201ENST00000404272 572 ntBASIC4.68□□□□□ -1.66
RXRBP28702 AL513475.1-201ENST00000406602 315 ntBASIC4.68□□□□□ -1.66
RXRBP28702 AL353621.1-201ENST00000418219 243 ntBASIC4.68□□□□□ -1.66
RXRBP28702 AC096920.1-201ENST00000423991 241 ntBASIC4.68□□□□□ -1.66
RXRBP28702 AL138785.1-201ENST00000425821 331 ntBASIC4.68□□□□□ -1.66
RXRBP28702 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RXRBP28702 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.68□□□□□ -1.66
RXRBP28702 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RXRBP28702 AC010469.2-201ENST00000496412 480 ntBASIC4.68□□□□□ -1.66
RXRBP28702 AC107393.1-201ENST00000512403 346 ntBASIC4.68□□□□□ -1.66
RXRBP28702 RNA5SP208-201ENST00000516156 78 ntBASIC4.68□□□□□ -1.66
RXRBP28702 RNU6-1338P-201ENST00000516328 91 ntBASIC4.68□□□□□ -1.66
RXRBP28702 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.68□□□□□ -1.66
RXRBP28702 AMZ2P1-203ENST00000565833 850 ntBASIC4.68□□□□□ -1.66
RXRBP28702 AC005951.2-201ENST00000576282 495 ntBASIC4.68□□□□□ -1.66
RXRBP28702 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.68□□□□□ -1.66
RXRBP28702 MIR5692A1-201ENST00000580523 69 ntBASIC4.68□□□□□ -1.66
RXRBP28702 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.68□□□□□ -1.66
RXRBP28702 AL121917.1-203ENST00000605534 577 ntBASIC4.68□□□□□ -1.66
RXRBP28702 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RXRBP28702 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RXRBP28702 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.68□□□□□ -1.66
RXRBP28702 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
RXRBP28702 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
RXRBP28702 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RXRBP28702 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.67□□□□□ -1.66
RXRBP28702 AC139713.2-215ENST00000641428 5037 ntBASIC4.67□□□□□ -1.66
RXRBP28702 RNU6-1266P-201ENST00000362794 105 ntBASIC4.67□□□□□ -1.66
RXRBP28702 EIF1P2-201ENST00000428233 350 ntBASIC4.67□□□□□ -1.66
RXRBP28702 MTND3P9-201ENST00000429526 346 ntBASIC4.67□□□□□ -1.66
RXRBP28702 AC004866.2-201ENST00000438285 481 ntBASIC4.67□□□□□ -1.66
RXRBP28702 AC010095.1-201ENST00000443543 144 ntBASIC4.67□□□□□ -1.66
RXRBP28702 AC013470.1-201ENST00000453438 462 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 177.2 ms