Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.09□□□□□ -2.23
CCL1P22362 snoU13.9-201ENST00000458927 103 ntBASIC1.09□□□□□ -2.23
CCL1P22362 snoU13.14-201ENST00000459372 104 ntBASIC1.09□□□□□ -2.23
CCL1P22362 MTND1P3-201ENST00000484956 952 ntBASIC1.09□□□□□ -2.23
CCL1P22362 HMGB1P30-201ENST00000492455 606 ntBASIC1.09□□□□□ -2.23
CCL1P22362 AC025465.3-201ENST00000510570 311 ntBASIC1.09□□□□□ -2.23
CCL1P22362 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.09□□□□□ -2.23
CCL1P22362 RNU6-677P-201ENST00000516914 101 ntBASIC1.09□□□□□ -2.23
CCL1P22362 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.09□□□□□ -2.23
CCL1P22362 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.09□□□□□ -2.23
CCL1P22362 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.09□□□□□ -2.23
CCL1P22362 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.09□□□□□ -2.23
CCL1P22362 RNU6-88P-201ENST00000606801 100 ntBASIC1.09□□□□□ -2.23
CCL1P22362 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.09□□□□□ -2.23
CCL1P22362 AC091304.6-201ENST00000619761 202 ntBASIC1.09□□□□□ -2.23
CCL1P22362 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.09□□□□□ -2.24
CCL1P22362 MIR1261-201ENST00000408659 82 ntBASIC1.08□□□□□ -2.24
CCL1P22362 RNU2-23P-201ENST00000410545 195 ntBASIC1.08□□□□□ -2.24
CCL1P22362 AL591212.2-201ENST00000433923 257 ntBASIC1.08□□□□□ -2.24
CCL1P22362 MTCO1P44-201ENST00000441935 243 ntBASIC1.08□□□□□ -2.24
CCL1P22362 AC245517.4-201ENST00000448601 281 ntBASIC1.08□□□□□ -2.24
CCL1P22362 YWHAEP4-201ENST00000505390 198 ntBASIC1.08□□□□□ -2.24
CCL1P22362 SUMO2P5-201ENST00000506790 245 ntBASIC1.08□□□□□ -2.24
CCL1P22362 RNU6-914P-201ENST00000516749 109 ntBASIC1.08□□□□□ -2.24
CCL1P22362 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.08□□□□□ -2.24
CCL1P22362 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.08□□□□□ -2.24
CCL1P22362 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.08□□□□□ -2.24
CCL1P22362 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.08□□□□□ -2.24
CCL1P22362 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.08□□□□□ -2.24
CCL1P22362 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.08□□□□□ -2.24
CCL1P22362 AC092325.1-201ENST00000566449 554 ntBASIC1.08□□□□□ -2.24
CCL1P22362 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.08□□□□□ -2.24
CCL1P22362 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.08□□□□□ -2.24
CCL1P22362 AC091812.1-201ENST00000432235 1948 ntBASIC1.08□□□□□ -2.24
CCL1P22362 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.08□□□□□ -2.24
CCL1P22362 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
CCL1P22362 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.08□□□□□ -2.24
CCL1P22362 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
CCL1P22362 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
CCL1P22362 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
CCL1P22362 RNU1-17P-201ENST00000363022 152 ntBASIC1.07□□□□□ -2.24
CCL1P22362 Y_RNA.110-201ENST00000363220 99 ntBASIC1.07□□□□□ -2.24
CCL1P22362 RNU6-457P-201ENST00000363999 107 ntBASIC1.07□□□□□ -2.24
CCL1P22362 SNORA4.3-201ENST00000365564 137 ntBASIC1.07□□□□□ -2.24
CCL1P22362 SNORD26-201ENST00000384147 75 ntBASIC1.07□□□□□ -2.24
CCL1P22362 U8.10-201ENST00000384260 133 ntBASIC1.07□□□□□ -2.24
CCL1P22362 RNU6-622P-201ENST00000384272 103 ntBASIC1.07□□□□□ -2.24
CCL1P22362 RNA5SP390-201ENST00000410191 113 ntBASIC1.07□□□□□ -2.24
CCL1P22362 RPL30P13-201ENST00000418873 348 ntBASIC1.07□□□□□ -2.24
CCL1P22362 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.07□□□□□ -2.24
CCL1P22362 CBX3P6-201ENST00000430257 527 ntBASIC1.07□□□□□ -2.24
CCL1P22362 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.07□□□□□ -2.24
CCL1P22362 AL606517.1-201ENST00000446914 387 ntBASIC1.07□□□□□ -2.24
CCL1P22362 FDX1P2-201ENST00000450769 375 ntBASIC1.07□□□□□ -2.24
CCL1P22362 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.07□□□□□ -2.24
CCL1P22362 MTCYBP40-201ENST00000509390 1135 ntBASIC1.07□□□□□ -2.24
CCL1P22362 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.07□□□□□ -2.24
CCL1P22362 AC090821.2-201ENST00000523552 176 ntBASIC1.07□□□□□ -2.24
CCL1P22362 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.07□□□□□ -2.24
CCL1P22362 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.07□□□□□ -2.24
CCL1P22362 BNIP3P27-201ENST00000599991 412 ntBASIC1.07□□□□□ -2.24
CCL1P22362 AC022893.3-201ENST00000607665 437 ntBASIC1.07□□□□□ -2.24
CCL1P22362 AC131235.4-201ENST00000609288 620 ntBASIC1.07□□□□□ -2.24
CCL1P22362 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.07□□□□□ -2.24
CCL1P22362 AC009269.6-201ENST00000621778 588 ntBASIC1.07□□□□□ -2.24
CCL1P22362 AP003476.1-201ENST00000623984 516 ntBASIC1.07□□□□□ -2.24
CCL1P22362 AC008993.2-201ENST00000631744 806 ntBASIC1.07□□□□□ -2.24
CCL1P22362 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
CCL1P22362 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.06□□□□□ -2.24
CCL1P22362 RNU6-160P-201ENST00000384591 107 ntBASIC1.06□□□□□ -2.24
CCL1P22362 MIR23A-201ENST00000385245 73 ntBASIC1.06□□□□□ -2.24
CCL1P22362 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.06□□□□□ -2.24
CCL1P22362 AC016831.2-201ENST00000417179 352 ntBASIC1.06□□□□□ -2.24
CCL1P22362 AL365338.1-201ENST00000422282 858 ntBASIC1.06□□□□□ -2.24
CCL1P22362 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.06□□□□□ -2.24
CCL1P22362 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.06□□□□□ -2.24
CCL1P22362 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.06□□□□□ -2.24
CCL1P22362 SDAD1P3-201ENST00000427380 333 ntBASIC1.06□□□□□ -2.24
CCL1P22362 MTND5P25-201ENST00000430499 799 ntBASIC1.06□□□□□ -2.24
CCL1P22362 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.06□□□□□ -2.24
CCL1P22362 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.06□□□□□ -2.24
CCL1P22362 RPS25P9-201ENST00000435591 252 ntBASIC1.06□□□□□ -2.24
CCL1P22362 AC132942.1-201ENST00000486753 483 ntBASIC1.06□□□□□ -2.24
CCL1P22362 AC099513.1-201ENST00000490423 301 ntBASIC1.06□□□□□ -2.24
CCL1P22362 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.06□□□□□ -2.24
CCL1P22362 COPS8P3-201ENST00000526024 482 ntBASIC1.06□□□□□ -2.24
CCL1P22362 AP000889.1-201ENST00000530968 660 ntBASIC1.06□□□□□ -2.24
CCL1P22362 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.06□□□□□ -2.24
CCL1P22362 SUB1P3-201ENST00000564581 315 ntBASIC1.06□□□□□ -2.24
CCL1P22362 MIR4421-201ENST00000578133 69 ntBASIC1.06□□□□□ -2.24
CCL1P22362 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.06□□□□□ -2.24
CCL1P22362 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.06□□□□□ -2.24
CCL1P22362 KC877982.1-201ENST00000602313 470 ntBASIC1.06□□□□□ -2.24
CCL1P22362 AP001485.1-201ENST00000604799 199 ntBASIC1.06□□□□□ -2.24
CCL1P22362 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC1.06□□□□□ -2.24
CCL1P22362 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.06□□□□□ -2.24
CCL1P22362 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
CCL1P22362 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.05□□□□□ -2.24
CCL1P22362 ZNF29P-201ENST00000225587 168 ntBASIC1.05□□□□□ -2.24
CCL1P22362 RNU6-942P-201ENST00000363002 107 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms