Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AL161423.1-201ENST00000613700 262 ntBASIC1.36□□□□□ -2.19
COL11A1P12107 AP001486.3-201ENST00000615334 372 ntBASIC1.36□□□□□ -2.19
COL11A1P12107 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
COL11A1P12107 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
COL11A1P12107 RNY4P24-201ENST00000362735 96 ntBASIC1.36□□□□□ -2.19
COL11A1P12107 SNORD116-1-201ENST00000384335 95 ntBASIC1.36□□□□□ -2.19
COL11A1P12107 RPS20P2-201ENST00000402520 389 ntBASIC1.36□□□□□ -2.19
COL11A1P12107 SRIP3-201ENST00000413200 219 ntBASIC1.36□□□□□ -2.19
COL11A1P12107 ZNF90P2-204ENST00000419323 1075 ntBASIC1.36□□□□□ -2.19
COL11A1P12107 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.36□□□□□ -2.19
COL11A1P12107 AL109913.1-201ENST00000421173 514 ntBASIC1.36□□□□□ -2.19
COL11A1P12107 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.36□□□□□ -2.19
COL11A1P12107 RPS27AP14-201ENST00000422868 454 ntBASIC1.36□□□□□ -2.19
COL11A1P12107 AC019178.2-201ENST00000423595 505 ntBASIC1.36□□□□□ -2.19
COL11A1P12107 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.36□□□□□ -2.19
COL11A1P12107 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.36□□□□□ -2.19
COL11A1P12107 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.36□□□□□ -2.19
COL11A1P12107 LARP1BP3-201ENST00000437229 869 ntBASIC1.36□□□□□ -2.19
COL11A1P12107 GDI2P2-201ENST00000445131 608 ntBASIC1.36□□□□□ -2.19
COL11A1P12107 RPL23AP35-201ENST00000451906 501 ntBASIC1.36□□□□□ -2.19
COL11A1P12107 AL033528.1-201ENST00000453780 140 ntBASIC1.36□□□□□ -2.19
COL11A1P12107 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.36□□□□□ -2.19
COL11A1P12107 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.36□□□□□ -2.19
COL11A1P12107 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
COL11A1P12107 NDUFB4P2-201ENST00000509515 391 ntBASIC1.36□□□□□ -2.19
COL11A1P12107 RNU6-201P-201ENST00000517100 61 ntBASIC1.36□□□□□ -2.19
COL11A1P12107 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
COL11A1P12107 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1.36□□□□□ -2.19
COL11A1P12107 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC1.36□□□□□ -2.19
COL11A1P12107 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.36□□□□□ -2.19
COL11A1P12107 BNIP3P23-201ENST00000599655 511 ntBASIC1.36□□□□□ -2.19
COL11A1P12107 AL596327.1-201ENST00000603629 213 ntBASIC1.36□□□□□ -2.19
COL11A1P12107 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.36□□□□□ -2.19
COL11A1P12107 AL031775.1-201ENST00000607014 887 ntBASIC1.36□□□□□ -2.19
COL11A1P12107 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.36□□□□□ -2.19
COL11A1P12107 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
COL11A1P12107 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.36□□□□□ -2.19
COL11A1P12107 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.36□□□□□ -2.19
COL11A1P12107 AC112204.3-201ENST00000623822 332 ntBASIC1.36□□□□□ -2.19
COL11A1P12107 AL138713.1-201ENST00000624026 2130 ntBASIC1.35□□□□□ -2.19
COL11A1P12107 RNU6-433P-201ENST00000363216 104 ntBASIC1.35□□□□□ -2.19
COL11A1P12107 RNU6-878P-201ENST00000384578 110 ntBASIC1.35□□□□□ -2.19
COL11A1P12107 MIR135A2-201ENST00000384854 100 ntBASIC1.35□□□□□ -2.19
COL11A1P12107 MIR625-201ENST00000385047 85 ntBASIC1.35□□□□□ -2.19
COL11A1P12107 MIR513A1-201ENST00000385138 129 ntBASIC1.35□□□□□ -2.19
COL11A1P12107 SNORA46.1-201ENST00000391069 153 ntBASIC1.35□□□□□ -2.19
COL11A1P12107 AL031577.2-201ENST00000404133 280 ntBASIC1.35□□□□□ -2.19
COL11A1P12107 MIR1284-201ENST00000408337 120 ntBASIC1.35□□□□□ -2.19
COL11A1P12107 RNU2-62P-201ENST00000410868 191 ntBASIC1.35□□□□□ -2.19
COL11A1P12107 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.35□□□□□ -2.19
COL11A1P12107 CCDC58P2-201ENST00000417131 366 ntBASIC1.35□□□□□ -2.19
COL11A1P12107 AL365184.2-201ENST00000431139 435 ntBASIC1.35□□□□□ -2.19
COL11A1P12107 AC005094.1-201ENST00000440420 368 ntBASIC1.35□□□□□ -2.19
COL11A1P12107 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.35□□□□□ -2.19
COL11A1P12107 AC138853.1-201ENST00000503549 823 ntBASIC1.35□□□□□ -2.19
COL11A1P12107 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.35□□□□□ -2.19
COL11A1P12107 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC1.35□□□□□ -2.19
COL11A1P12107 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.35□□□□□ -2.19
COL11A1P12107 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.35□□□□□ -2.19
COL11A1P12107 MIR3167-201ENST00000579623 85 ntBASIC1.35□□□□□ -2.19
COL11A1P12107 AC005771.1-201ENST00000585581 349 ntBASIC1.35□□□□□ -2.19
COL11A1P12107 AP000811.1-201ENST00000603803 651 ntBASIC1.35□□□□□ -2.19
COL11A1P12107 AC090186.1-201ENST00000605991 572 ntBASIC1.35□□□□□ -2.19
COL11A1P12107 AC120349.3-201ENST00000624377 529 ntBASIC1.35□□□□□ -2.19
COL11A1P12107 AC091895.1-201ENST00000624494 256 ntBASIC1.35□□□□□ -2.19
COL11A1P12107 MIR7157-201ENST00000635801 60 ntBASIC1.35□□□□□ -2.19
COL11A1P12107 RNU6-270P-201ENST00000364131 105 ntBASIC1.34□□□□□ -2.19
COL11A1P12107 RNA5SP240-201ENST00000365355 128 ntBASIC1.34□□□□□ -2.19
COL11A1P12107 RNA5SP465-201ENST00000391195 109 ntBASIC1.34□□□□□ -2.19
COL11A1P12107 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC1.34□□□□□ -2.19
COL11A1P12107 AL356379.1-201ENST00000414105 126 ntBASIC1.34□□□□□ -2.19
COL11A1P12107 SEPT2P1-201ENST00000419651 180 ntBASIC1.34□□□□□ -2.19
COL11A1P12107 AC090960.1-201ENST00000421072 306 ntBASIC1.34□□□□□ -2.19
COL11A1P12107 AC137499.1-201ENST00000427602 88 ntBASIC1.34□□□□□ -2.19
COL11A1P12107 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.34□□□□□ -2.19
COL11A1P12107 MTATP6P17-201ENST00000431030 672 ntBASIC1.34□□□□□ -2.19
COL11A1P12107 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC1.34□□□□□ -2.19
COL11A1P12107 AL117351.1-201ENST00000438864 766 ntBASIC1.34□□□□□ -2.19
COL11A1P12107 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.34□□□□□ -2.19
COL11A1P12107 GAPDHP17-201ENST00000449858 1001 ntBASIC1.34□□□□□ -2.19
COL11A1P12107 ART2BP-201ENST00000453501 499 ntBASIC1.34□□□□□ -2.19
COL11A1P12107 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.34□□□□□ -2.19
COL11A1P12107 RPS3AP22-201ENST00000488297 769 ntBASIC1.34□□□□□ -2.19
COL11A1P12107 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1.34□□□□□ -2.19
COL11A1P12107 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.34□□□□□ -2.19
COL11A1P12107 AC010486.3-201ENST00000511602 785 ntBASIC1.34□□□□□ -2.19
COL11A1P12107 RN7SKP258-201ENST00000517151 304 ntBASIC1.34□□□□□ -2.19
COL11A1P12107 DUXAP5-201ENST00000529668 529 ntBASIC1.34□□□□□ -2.19
COL11A1P12107 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.34□□□□□ -2.19
COL11A1P12107 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.34□□□□□ -2.19
COL11A1P12107 AC121334.2-201ENST00000605387 271 ntBASIC1.34□□□□□ -2.19
COL11A1P12107 RNU6-87P-201ENST00000607561 108 ntBASIC1.34□□□□□ -2.19
COL11A1P12107 Z69908.1-201ENST00000622603 247 ntBASIC1.34□□□□□ -2.19
COL11A1P12107 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.34□□□□□ -2.19
COL11A1P12107 MIR3974-201ENST00000637126 96 ntBASIC1.34□□□□□ -2.19
COL11A1P12107 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
COL11A1P12107 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
COL11A1P12107 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.34□□□□□ -2.2
COL11A1P12107 RNU6-97P-201ENST00000363387 104 ntBASIC1.33□□□□□ -2.2
COL11A1P12107 RNU6-288P-201ENST00000363690 104 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms