Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 ZNF92P3-201ENST00000596594 954 ntBASIC-0.39□□□□□ -2.47
TOP2AP11388 AC084373.1-201ENST00000603311 235 ntBASIC-0.39□□□□□ -2.47
TOP2AP11388 PCMTD1P7-201ENST00000634506 357 ntBASIC-0.39□□□□□ -2.47
TOP2AP11388 ZNF663P-202ENST00000641770 1131 ntBASIC-0.39□□□□□ -2.47
TOP2AP11388 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC-0.39□□□□□ -2.47
TOP2AP11388 RNA5SP214-201ENST00000363378 118 ntBASIC-0.4□□□□□ -2.47
TOP2AP11388 MIR200A-201ENST00000384875 90 ntBASIC-0.4□□□□□ -2.47
TOP2AP11388 RPS29P8-201ENST00000445109 171 ntBASIC-0.4□□□□□ -2.47
TOP2AP11388 OR2AQ1P-201ENST00000451972 200 ntBASIC-0.4□□□□□ -2.47
TOP2AP11388 snoU13.25-201ENST00000458945 104 ntBASIC-0.4□□□□□ -2.47
TOP2AP11388 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC-0.4□□□□□ -2.47
TOP2AP11388 AC091874.1-201ENST00000511402 339 ntBASIC-0.4□□□□□ -2.47
TOP2AP11388 SNORA70.22-201ENST00000517160 124 ntBASIC-0.4□□□□□ -2.47
TOP2AP11388 AC092354.1-201ENST00000606057 376 ntBASIC-0.4□□□□□ -2.47
TOP2AP11388 AC090517.2-201ENST00000614966 680 ntBASIC-0.4□□□□□ -2.47
TOP2AP11388 AL359314.1-201ENST00000616913 261 ntBASIC-0.4□□□□□ -2.47
TOP2AP11388 AL079343.1-201ENST00000572358 1771 ntBASIC-0.41□□□□□ -2.47
TOP2AP11388 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC-0.41□□□□□ -2.48
TOP2AP11388 RNU6-414P-201ENST00000363705 104 ntBASIC-0.41□□□□□ -2.48
TOP2AP11388 MIR518A1-201ENST00000385068 85 ntBASIC-0.41□□□□□ -2.48
TOP2AP11388 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.41□□□□□ -2.48
TOP2AP11388 AL353777.1-201ENST00000425552 326 ntBASIC-0.41□□□□□ -2.48
TOP2AP11388 RAD1P2-201ENST00000446414 663 ntBASIC-0.41□□□□□ -2.48
TOP2AP11388 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.41□□□□□ -2.48
TOP2AP11388 MIR4431-201ENST00000579990 94 ntBASIC-0.41□□□□□ -2.48
TOP2AP11388 AL513534.2-201ENST00000603836 250 ntBASIC-0.41□□□□□ -2.48
TOP2AP11388 AC096720.1-201ENST00000604441 183 ntBASIC-0.41□□□□□ -2.48
TOP2AP11388 AC096586.2-201ENST00000610260 441 ntBASIC-0.41□□□□□ -2.48
TOP2AP11388 RNU6-1249P-201ENST00000363237 111 ntBASIC-0.42□□□□□ -2.48
TOP2AP11388 AL359704.1-201ENST00000411586 781 ntBASIC-0.42□□□□□ -2.48
TOP2AP11388 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC-0.42□□□□□ -2.48
TOP2AP11388 AC016717.1-201ENST00000448918 286 ntBASIC-0.42□□□□□ -2.48
TOP2AP11388 AC084024.2-201ENST00000503480 791 ntBASIC-0.42□□□□□ -2.48
TOP2AP11388 AC074344.1-201ENST00000512823 224 ntBASIC-0.42□□□□□ -2.48
TOP2AP11388 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC-0.42□□□□□ -2.48
TOP2AP11388 MIR4764-201ENST00000580680 88 ntBASIC-0.42□□□□□ -2.48
TOP2AP11388 BNIP3P26-201ENST00000600827 554 ntBASIC-0.42□□□□□ -2.48
TOP2AP11388 AL353778.1-201ENST00000603149 408 ntBASIC-0.42□□□□□ -2.48
TOP2AP11388 RNU6-317P-201ENST00000384031 107 ntBASIC-0.43□□□□□ -2.48
TOP2AP11388 RNU6-1035P-201ENST00000384477 107 ntBASIC-0.43□□□□□ -2.48
TOP2AP11388 RNA5SP100-201ENST00000410903 110 ntBASIC-0.43□□□□□ -2.48
TOP2AP11388 RNA5SP59-201ENST00000410922 110 ntBASIC-0.43□□□□□ -2.48
TOP2AP11388 SNORA31.6-201ENST00000516241 130 ntBASIC-0.43□□□□□ -2.48
TOP2AP11388 5S_rRNA.3-201ENST00000517021 110 ntBASIC-0.43□□□□□ -2.48
TOP2AP11388 AL713866.2-201ENST00000603579 219 ntBASIC-0.43□□□□□ -2.48
TOP2AP11388 AL353149.1-201ENST00000610667 244 ntBASIC-0.43□□□□□ -2.48
TOP2AP11388 5S_rRNA.19-201ENST00000612131 110 ntBASIC-0.43□□□□□ -2.48
TOP2AP11388 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC-0.43□□□□□ -2.48
TOP2AP11388 5S_rRNA.18-201ENST00000621941 110 ntBASIC-0.43□□□□□ -2.48
TOP2AP11388 MIR4315-1-201ENST00000636800 73 ntBASIC-0.43□□□□□ -2.48
TOP2AP11388 MIR4315-2-201ENST00000640925 73 ntBASIC-0.43□□□□□ -2.48
TOP2AP11388 SNORA51.6-201ENST00000384151 125 ntBASIC-0.43□□□□□ -2.48
TOP2AP11388 AL160275.3-201ENST00000423876 471 ntBASIC-0.43□□□□□ -2.48
TOP2AP11388 SNRPGP12-201ENST00000449481 213 ntBASIC-0.43□□□□□ -2.48
TOP2AP11388 AC093534.1-201ENST00000504977 132 ntBASIC-0.43□□□□□ -2.48
TOP2AP11388 MDM2-232ENST00000544561 213 ntTSL 5 BASIC-0.43□□□□□ -2.48
TOP2AP11388 AL121652.1-201ENST00000608851 448 ntBASIC-0.43□□□□□ -2.48
TOP2AP11388 AC055764.2-201ENST00000610089 670 ntBASIC-0.43□□□□□ -2.48
TOP2AP11388 AP000943.4-201ENST00000622912 357 ntBASIC-0.43□□□□□ -2.48
TOP2AP11388 AC097372.4-201ENST00000625025 466 ntBASIC-0.43□□□□□ -2.48
TOP2AP11388 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC-0.44□□□□□ -2.48
TOP2AP11388 RNU6-546P-201ENST00000383991 107 ntBASIC-0.44□□□□□ -2.48
TOP2AP11388 RNU6-39P-201ENST00000384344 107 ntBASIC-0.44□□□□□ -2.48
TOP2AP11388 SNRPEP9-201ENST00000436794 238 ntBASIC-0.44□□□□□ -2.48
TOP2AP11388 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC-0.44□□□□□ -2.48
TOP2AP11388 RNU6-320P-201ENST00000516511 106 ntBASIC-0.44□□□□□ -2.48
TOP2AP11388 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC-0.44□□□□□ -2.48
TOP2AP11388 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC-0.44□□□□□ -2.48
TOP2AP11388 AC011155.2-201ENST00000623202 216 ntBASIC-0.44□□□□□ -2.48
TOP2AP11388 RNU6-1065P-201ENST00000384513 106 ntBASIC-0.45□□□□□ -2.48
TOP2AP11388 MIR561-201ENST00000385216 97 ntBASIC-0.45□□□□□ -2.48
TOP2AP11388 HMGB1P17-201ENST00000403495 628 ntBASIC-0.45□□□□□ -2.48
TOP2AP11388 RPL22P18-201ENST00000417197 377 ntBASIC-0.45□□□□□ -2.48
TOP2AP11388 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC-0.45□□□□□ -2.48
TOP2AP11388 RNA5SP168-201ENST00000516642 112 ntBASIC-0.45□□□□□ -2.48
TOP2AP11388 RN7SKP88-201ENST00000516847 250 ntBASIC-0.45□□□□□ -2.48
TOP2AP11388 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC-0.45□□□□□ -2.48
TOP2AP11388 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC-0.45□□□□□ -2.48
TOP2AP11388 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC-0.45□□□□□ -2.48
TOP2AP11388 7SK.8-201ENST00000612110 250 ntBASIC-0.45□□□□□ -2.48
TOP2AP11388 7SK.11-201ENST00000615477 250 ntBASIC-0.45□□□□□ -2.48
TOP2AP11388 7SK.13-201ENST00000622040 250 ntBASIC-0.45□□□□□ -2.48
TOP2AP11388 MIR29C-201ENST00000385231 88 ntBASIC-0.46□□□□□ -2.48
TOP2AP11388 RNU6ATAC8P-201ENST00000408460 126 ntBASIC-0.46□□□□□ -2.48
TOP2AP11388 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.46□□□□□ -2.48
TOP2AP11388 HAUS1P3-201ENST00000523909 662 ntBASIC-0.46□□□□□ -2.48
TOP2AP11388 AC060771.1-201ENST00000582031 164 ntBASIC-0.46□□□□□ -2.48
TOP2AP11388 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.47□□□□□ -2.48
TOP2AP11388 RNU6-654P-201ENST00000364373 107 ntBASIC-0.47□□□□□ -2.48
TOP2AP11388 RNU6-1074P-201ENST00000383995 104 ntBASIC-0.47□□□□□ -2.48
TOP2AP11388 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.47□□□□□ -2.48
TOP2AP11388 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC-0.47□□□□□ -2.48
TOP2AP11388 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC-0.47□□□□□ -2.48
TOP2AP11388 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.47□□□□□ -2.48
TOP2AP11388 RNA5SP255-201ENST00000516370 107 ntBASIC-0.47□□□□□ -2.48
TOP2AP11388 BPTFP1-201ENST00000579209 492 ntBASIC-0.47□□□□□ -2.48
TOP2AP11388 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC-0.47□□□□□ -2.48
TOP2AP11388 AC009233.1-201ENST00000616477 371 ntBASIC-0.47□□□□□ -2.48
TOP2AP11388 AL590240.4-201ENST00000616908 390 ntBASIC-0.47□□□□□ -2.48
TOP2AP11388 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC-0.47□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms