Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SNRPA1P09661 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SNRPA1P09661 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
SNRPA1P09661 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.75□□□□□ -1.81
SNRPA1P09661 SNORD56.3-201ENST00000363507 71 ntBASIC3.75□□□□□ -1.81
SNRPA1P09661 Y_RNA.202-201ENST00000364083 110 ntBASIC3.75□□□□□ -1.81
SNRPA1P09661 SNORA9.2-201ENST00000365361 133 ntBASIC3.75□□□□□ -1.81
SNRPA1P09661 Y_RNA.395-201ENST00000383945 109 ntBASIC3.75□□□□□ -1.81
SNRPA1P09661 Y_RNA.480-201ENST00000384364 102 ntBASIC3.75□□□□□ -1.81
SNRPA1P09661 RNU6-738P-201ENST00000384531 106 ntBASIC3.75□□□□□ -1.81
SNRPA1P09661 RNU6-306P-201ENST00000384617 107 ntBASIC3.75□□□□□ -1.81
SNRPA1P09661 RNU6-1179P-201ENST00000384667 107 ntBASIC3.75□□□□□ -1.81
SNRPA1P09661 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.75□□□□□ -1.81
SNRPA1P09661 RNA5SP274-201ENST00000410484 108 ntBASIC3.75□□□□□ -1.81
SNRPA1P09661 RPL27AP8-201ENST00000424277 446 ntBASIC3.75□□□□□ -1.81
SNRPA1P09661 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.75□□□□□ -1.81
SNRPA1P09661 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SNRPA1P09661 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.75□□□□□ -1.81
SNRPA1P09661 AL359273.1-201ENST00000510918 627 ntBASIC3.75□□□□□ -1.81
SNRPA1P09661 SCARNA15.2-201ENST00000516409 127 ntBASIC3.75□□□□□ -1.81
SNRPA1P09661 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.75□□□□□ -1.81
SNRPA1P09661 MIR3162-201ENST00000581818 82 ntBASIC3.75□□□□□ -1.81
SNRPA1P09661 AC006504.6-201ENST00000590142 199 ntBASIC3.75□□□□□ -1.81
SNRPA1P09661 NUTF2P8-201ENST00000604593 363 ntBASIC3.75□□□□□ -1.81
SNRPA1P09661 AC016925.2-201ENST00000605108 242 ntBASIC3.75□□□□□ -1.81
SNRPA1P09661 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.75□□□□□ -1.81
SNRPA1P09661 AC116312.1-201ENST00000606841 314 ntBASIC3.75□□□□□ -1.81
SNRPA1P09661 AC019193.3-201ENST00000609144 554 ntBASIC3.75□□□□□ -1.81
SNRPA1P09661 AC107294.1-201ENST00000609524 467 ntBASIC3.75□□□□□ -1.81
SNRPA1P09661 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.75□□□□□ -1.81
SNRPA1P09661 AC098657.3-201ENST00000620434 263 ntBASIC3.75□□□□□ -1.81
SNRPA1P09661 uc_338.22-201ENST00000622722 187 ntBASIC3.75□□□□□ -1.81
SNRPA1P09661 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.75□□□□□ -1.81
SNRPA1P09661 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.75□□□□□ -1.81
SNRPA1P09661 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SNRPA1P09661 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.75□□□□□ -1.81
SNRPA1P09661 MTND5P10-201ENST00000603719 1809 ntBASIC3.74□□□□□ -1.81
SNRPA1P09661 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
SNRPA1P09661 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SNRPA1P09661 SNORA63C-201ENST00000364578 129 ntBASIC3.74□□□□□ -1.81
SNRPA1P09661 SNORA33.2-201ENST00000365413 134 ntBASIC3.74□□□□□ -1.81
SNRPA1P09661 SNORA22B-201ENST00000383876 138 ntBASIC3.74□□□□□ -1.81
SNRPA1P09661 Z85995.1-201ENST00000415547 335 ntBASIC3.74□□□□□ -1.81
SNRPA1P09661 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.74□□□□□ -1.81
SNRPA1P09661 HMGB1P9-201ENST00000429856 646 ntBASIC3.74□□□□□ -1.81
SNRPA1P09661 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.74□□□□□ -1.81
SNRPA1P09661 RNU7-170P-201ENST00000459303 61 ntBASIC3.74□□□□□ -1.81
SNRPA1P09661 RPL31P60-201ENST00000478450 367 ntBASIC3.74□□□□□ -1.81
SNRPA1P09661 AC022493.1-201ENST00000492984 337 ntBASIC3.74□□□□□ -1.81
SNRPA1P09661 AC026801.1-201ENST00000497178 464 ntBASIC3.74□□□□□ -1.81
SNRPA1P09661 AC092436.3-201ENST00000511788 257 ntBASIC3.74□□□□□ -1.81
SNRPA1P09661 RNA5SP468-201ENST00000516782 93 ntBASIC3.74□□□□□ -1.81
SNRPA1P09661 RNU6-143P-201ENST00000516942 93 ntBASIC3.74□□□□□ -1.81
SNRPA1P09661 RNU6-1315P-201ENST00000517187 99 ntBASIC3.74□□□□□ -1.81
SNRPA1P09661 MIR3921-201ENST00000577308 85 ntBASIC3.74□□□□□ -1.81
SNRPA1P09661 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SNRPA1P09661 AC024153.1-201ENST00000603103 365 ntBASIC3.74□□□□□ -1.81
SNRPA1P09661 RNU6-85P-201ENST00000605989 107 ntBASIC3.74□□□□□ -1.81
SNRPA1P09661 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SNRPA1P09661 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.74□□□□□ -1.81
SNRPA1P09661 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.74□□□□□ -1.81
SNRPA1P09661 AC002546.1-201ENST00000588041 2504 ntBASIC3.74□□□□□ -1.81
SNRPA1P09661 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.73□□□□□ -1.81
SNRPA1P09661 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SNRPA1P09661 RNU6-593P-201ENST00000364716 112 ntBASIC3.73□□□□□ -1.81
SNRPA1P09661 RNU6-214P-201ENST00000384130 107 ntBASIC3.73□□□□□ -1.81
SNRPA1P09661 CYCSP33-201ENST00000414485 327 ntBASIC3.73□□□□□ -1.81
SNRPA1P09661 AC245291.1-201ENST00000419501 328 ntBASIC3.73□□□□□ -1.81
SNRPA1P09661 ATG3P1-201ENST00000419507 911 ntBASIC3.73□□□□□ -1.81
SNRPA1P09661 PMCHL1-202ENST00000423102 261 ntBASIC3.73□□□□□ -1.81
SNRPA1P09661 AC007919.1-201ENST00000429380 217 ntBASIC3.73□□□□□ -1.81
SNRPA1P09661 HIGD1AP11-201ENST00000438361 280 ntBASIC3.73□□□□□ -1.81
SNRPA1P09661 RNU7-138P-201ENST00000459479 64 ntBASIC3.73□□□□□ -1.81
SNRPA1P09661 RPL7P42-201ENST00000481005 679 ntBASIC3.73□□□□□ -1.81
SNRPA1P09661 AC096745.1-201ENST00000509945 370 ntBASIC3.73□□□□□ -1.81
SNRPA1P09661 AC026782.1-201ENST00000512952 449 ntBASIC3.73□□□□□ -1.81
SNRPA1P09661 Y_RNA.670-201ENST00000516255 105 ntBASIC3.73□□□□□ -1.81
SNRPA1P09661 SNORA31.8-201ENST00000516327 108 ntBASIC3.73□□□□□ -1.81
SNRPA1P09661 RNU1-54P-201ENST00000517181 120 ntBASIC3.73□□□□□ -1.81
SNRPA1P09661 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.73□□□□□ -1.81
SNRPA1P09661 AC104576.1-201ENST00000524225 88 ntBASIC3.73□□□□□ -1.81
SNRPA1P09661 SNRPGP18-201ENST00000553000 214 ntBASIC3.73□□□□□ -1.81
SNRPA1P09661 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.73□□□□□ -1.81
SNRPA1P09661 AL157871.3-201ENST00000557231 293 ntBASIC3.73□□□□□ -1.81
SNRPA1P09661 MIR4298-201ENST00000584380 73 ntBASIC3.73□□□□□ -1.81
SNRPA1P09661 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.73□□□□□ -1.81
SNRPA1P09661 CYP2C61P-201ENST00000604072 290 ntBASIC3.73□□□□□ -1.81
SNRPA1P09661 ELOCP5-201ENST00000604924 333 ntBASIC3.73□□□□□ -1.81
SNRPA1P09661 AP000654.2-201ENST00000605633 586 ntBASIC3.73□□□□□ -1.81
SNRPA1P09661 AC009229.3-201ENST00000608056 282 ntBASIC3.73□□□□□ -1.81
SNRPA1P09661 AP002826.1-201ENST00000608835 315 ntBASIC3.73□□□□□ -1.81
SNRPA1P09661 AC090132.2-201ENST00000615881 347 ntBASIC3.73□□□□□ -1.81
SNRPA1P09661 PLCE1P1-201ENST00000622094 305 ntBASIC3.73□□□□□ -1.81
SNRPA1P09661 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.73□□□□□ -1.81
SNRPA1P09661 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SNRPA1P09661 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.72□□□□□ -1.81
SNRPA1P09661 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SNRPA1P09661 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.72□□□□□ -1.81
SNRPA1P09661 RNA5SP383-201ENST00000362934 120 ntBASIC3.72□□□□□ -1.81
SNRPA1P09661 DEFB109C-201ENST00000382575 264 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 201.5 ms