Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.24□□□□□ -2.21
APOEP02649 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.24□□□□□ -2.21
APOEP02649 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.24□□□□□ -2.21
APOEP02649 RNU6-1010P-201ENST00000362757 107 ntBASIC1.23□□□□□ -2.21
APOEP02649 RNY1P10-201ENST00000363268 113 ntBASIC1.23□□□□□ -2.21
APOEP02649 RNU6-529P-201ENST00000363383 104 ntBASIC1.23□□□□□ -2.21
APOEP02649 RNU6-392P-201ENST00000364926 101 ntBASIC1.23□□□□□ -2.21
APOEP02649 RNU6-166P-201ENST00000384371 107 ntBASIC1.23□□□□□ -2.21
APOEP02649 SNORA48.1-201ENST00000390879 135 ntBASIC1.23□□□□□ -2.21
APOEP02649 MIR1284-201ENST00000408337 120 ntBASIC1.23□□□□□ -2.21
APOEP02649 RPS12P24-201ENST00000412619 387 ntBASIC1.23□□□□□ -2.21
APOEP02649 AC016831.2-201ENST00000417179 352 ntBASIC1.23□□□□□ -2.21
APOEP02649 USP9YP21-201ENST00000420603 432 ntBASIC1.23□□□□□ -2.21
APOEP02649 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.23□□□□□ -2.21
APOEP02649 AL354941.1-201ENST00000438600 464 ntBASIC1.23□□□□□ -2.21
APOEP02649 BTBD7P2-201ENST00000441962 620 ntBASIC1.23□□□□□ -2.21
APOEP02649 AC079448.1-201ENST00000449377 373 ntBASIC1.23□□□□□ -2.21
APOEP02649 RNU6-1028P-201ENST00000517164 93 ntBASIC1.23□□□□□ -2.21
APOEP02649 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.23□□□□□ -2.21
APOEP02649 AP003034.1-201ENST00000534621 422 ntBASIC1.23□□□□□ -2.21
APOEP02649 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.23□□□□□ -2.21
APOEP02649 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.23□□□□□ -2.21
APOEP02649 WISP1-OT1-201ENST00000602893 642 ntBASIC1.23□□□□□ -2.21
APOEP02649 AP001981.2-201ENST00000603241 418 ntBASIC1.23□□□□□ -2.21
APOEP02649 AC007363.1-201ENST00000604736 620 ntBASIC1.23□□□□□ -2.21
APOEP02649 MIR8074-201ENST00000615081 81 ntBASIC1.23□□□□□ -2.21
APOEP02649 AL589994.2-201ENST00000621124 579 ntBASIC1.23□□□□□ -2.21
APOEP02649 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.23□□□□□ -2.21
APOEP02649 DDX43P2-201ENST00000604753 1354 ntBASIC1.22□□□□□ -2.21
APOEP02649 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
APOEP02649 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.22□□□□□ -2.21
APOEP02649 RNU6-1284P-201ENST00000363701 100 ntBASIC1.22□□□□□ -2.21
APOEP02649 RNU6-224P-201ENST00000384055 107 ntBASIC1.22□□□□□ -2.21
APOEP02649 AC119751.3-201ENST00000399720 670 ntBASIC1.22□□□□□ -2.21
APOEP02649 FCF1P10-201ENST00000407590 479 ntBASIC1.22□□□□□ -2.21
APOEP02649 MTCO1P17-201ENST00000411522 491 ntBASIC1.22□□□□□ -2.21
APOEP02649 SRIP3-201ENST00000413200 219 ntBASIC1.22□□□□□ -2.21
APOEP02649 MTND4P3-201ENST00000417829 541 ntBASIC1.22□□□□□ -2.21
APOEP02649 AC083875.1-201ENST00000419509 405 ntBASIC1.22□□□□□ -2.21
APOEP02649 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
APOEP02649 HMGN2P18-201ENST00000450680 270 ntBASIC1.22□□□□□ -2.21
APOEP02649 ZNF886P-201ENST00000450781 723 ntBASIC1.22□□□□□ -2.21
APOEP02649 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.22□□□□□ -2.21
APOEP02649 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.22□□□□□ -2.21
APOEP02649 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.22□□□□□ -2.21
APOEP02649 SNORA31.17-201ENST00000516953 127 ntBASIC1.22□□□□□ -2.21
APOEP02649 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.22□□□□□ -2.21
APOEP02649 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.22□□□□□ -2.21
APOEP02649 AC098848.2-201ENST00000588023 330 ntBASIC1.22□□□□□ -2.21
APOEP02649 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC1.22□□□□□ -2.21
APOEP02649 VN1R83P-201ENST00000595685 445 ntBASIC1.22□□□□□ -2.21
APOEP02649 BNIP3P30-201ENST00000601184 574 ntBASIC1.22□□□□□ -2.21
APOEP02649 AC012065.4-201ENST00000602445 679 ntBASIC1.22□□□□□ -2.21
APOEP02649 AL050343.2-201ENST00000607338 280 ntBASIC1.22□□□□□ -2.21
APOEP02649 AC091895.1-201ENST00000624494 256 ntBASIC1.22□□□□□ -2.21
APOEP02649 AP003485.1-201ENST00000625093 753 ntBASIC1.22□□□□□ -2.21
APOEP02649 HAUS6P2-201ENST00000433254 2404 ntBASIC1.21□□□□□ -2.22
APOEP02649 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.21□□□□□ -2.22
APOEP02649 MIR337-201ENST00000362281 93 ntBASIC1.21□□□□□ -2.22
APOEP02649 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.21□□□□□ -2.22
APOEP02649 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.21□□□□□ -2.22
APOEP02649 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.21□□□□□ -2.22
APOEP02649 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.21□□□□□ -2.22
APOEP02649 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.21□□□□□ -2.22
APOEP02649 MTCO1P27-201ENST00000448269 226 ntBASIC1.21□□□□□ -2.22
APOEP02649 AC010409.1-201ENST00000487382 476 ntBASIC1.21□□□□□ -2.22
APOEP02649 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.21□□□□□ -2.22
APOEP02649 AC099513.1-201ENST00000490423 301 ntBASIC1.21□□□□□ -2.22
APOEP02649 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.21□□□□□ -2.22
APOEP02649 AP004247.1-201ENST00000531556 1289 ntBASIC1.21□□□□□ -2.22
APOEP02649 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC1.21□□□□□ -2.22
APOEP02649 MTCYBP33-201ENST00000575007 1130 ntBASIC1.21□□□□□ -2.22
APOEP02649 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.21□□□□□ -2.22
APOEP02649 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.21□□□□□ -2.22
APOEP02649 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
APOEP02649 FARSBP1-201ENST00000435808 1778 ntBASIC1.21□□□□□ -2.22
APOEP02649 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
APOEP02649 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
APOEP02649 Y_RNA.40-201ENST00000362645 93 ntBASIC1.2□□□□□ -2.22
APOEP02649 SNORA4.3-201ENST00000365564 137 ntBASIC1.2□□□□□ -2.22
APOEP02649 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.2□□□□□ -2.22
APOEP02649 RNU1-78P-201ENST00000391248 165 ntBASIC1.2□□□□□ -2.22
APOEP02649 UBE2V1P10-201ENST00000414685 269 ntBASIC1.2□□□□□ -2.22
APOEP02649 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.2□□□□□ -2.22
APOEP02649 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.2□□□□□ -2.22
APOEP02649 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.2□□□□□ -2.22
APOEP02649 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.2□□□□□ -2.22
APOEP02649 AC093852.1-201ENST00000503587 266 ntBASIC1.2□□□□□ -2.22
APOEP02649 AC109329.1-201ENST00000518744 317 ntBASIC1.2□□□□□ -2.22
APOEP02649 MTND1P36-201ENST00000522384 936 ntBASIC1.2□□□□□ -2.22
APOEP02649 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.2□□□□□ -2.22
APOEP02649 AP003049.1-201ENST00000529418 457 ntBASIC1.2□□□□□ -2.22
APOEP02649 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC1.2□□□□□ -2.22
APOEP02649 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.2□□□□□ -2.22
APOEP02649 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.2□□□□□ -2.22
APOEP02649 MIR4422-201ENST00000581938 83 ntBASIC1.2□□□□□ -2.22
APOEP02649 MTATP6P2-201ENST00000603319 678 ntBASIC1.2□□□□□ -2.22
APOEP02649 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.2□□□□□ -2.22
APOEP02649 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.19□□□□□ -2.22
APOEP02649 CBX3P1-201ENST00000325243 554 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms