Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 UBE2V1P10-201ENST00000414685 269 ntBASIC1.59□□□□□ -2.15
HLA-DQA1P01909 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.59□□□□□ -2.15
HLA-DQA1P01909 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.59□□□□□ -2.15
HLA-DQA1P01909 AC008267.5-201ENST00000424928 265 ntBASIC1.59□□□□□ -2.15
HLA-DQA1P01909 GPR143P-201ENST00000434155 205 ntBASIC1.59□□□□□ -2.15
HLA-DQA1P01909 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.59□□□□□ -2.15
HLA-DQA1P01909 AP001025.1-201ENST00000486139 332 ntBASIC1.59□□□□□ -2.15
HLA-DQA1P01909 MTAPP1-201ENST00000489154 819 ntBASIC1.59□□□□□ -2.15
HLA-DQA1P01909 HMGB1P30-201ENST00000492455 606 ntBASIC1.59□□□□□ -2.15
HLA-DQA1P01909 AC098862.1-201ENST00000504991 413 ntBASIC1.59□□□□□ -2.15
HLA-DQA1P01909 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.59□□□□□ -2.15
HLA-DQA1P01909 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.59□□□□□ -2.15
HLA-DQA1P01909 RNU4-29P-201ENST00000515943 174 ntBASIC1.59□□□□□ -2.15
HLA-DQA1P01909 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.59□□□□□ -2.15
HLA-DQA1P01909 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.59□□□□□ -2.15
HLA-DQA1P01909 RANP3-201ENST00000530970 276 ntBASIC1.59□□□□□ -2.15
HLA-DQA1P01909 BNIP3P6-201ENST00000549284 499 ntBASIC1.59□□□□□ -2.15
HLA-DQA1P01909 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.59□□□□□ -2.15
HLA-DQA1P01909 AC136619.2-201ENST00000563361 631 ntBASIC1.59□□□□□ -2.15
HLA-DQA1P01909 AL138976.2-201ENST00000563989 694 ntBASIC1.59□□□□□ -2.15
HLA-DQA1P01909 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.59□□□□□ -2.15
HLA-DQA1P01909 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.59□□□□□ -2.15
HLA-DQA1P01909 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.59□□□□□ -2.15
HLA-DQA1P01909 AC073539.2-201ENST00000597113 165 ntBASIC1.59□□□□□ -2.15
HLA-DQA1P01909 AC008749.1-201ENST00000597650 306 ntBASIC1.59□□□□□ -2.15
HLA-DQA1P01909 BNIP3P30-201ENST00000601184 574 ntBASIC1.59□□□□□ -2.15
HLA-DQA1P01909 AL713866.2-201ENST00000603579 219 ntBASIC1.59□□□□□ -2.15
HLA-DQA1P01909 AL355297.2-201ENST00000604792 129 ntBASIC1.59□□□□□ -2.15
HLA-DQA1P01909 AC021646.1-201ENST00000605469 484 ntBASIC1.59□□□□□ -2.15
HLA-DQA1P01909 NDUFA8P1-201ENST00000605525 367 ntBASIC1.59□□□□□ -2.15
HLA-DQA1P01909 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.59□□□□□ -2.15
HLA-DQA1P01909 MIR5739-201ENST00000619803 80 ntBASIC1.59□□□□□ -2.15
HLA-DQA1P01909 AL162373.1-201ENST00000620433 407 ntBASIC1.59□□□□□ -2.15
HLA-DQA1P01909 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.59□□□□□ -2.15
HLA-DQA1P01909 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.59□□□□□ -2.15
HLA-DQA1P01909 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.59□□□□□ -2.16
HLA-DQA1P01909 KPNA2P1-201ENST00000458289 1591 ntBASIC1.59□□□□□ -2.16
HLA-DQA1P01909 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.59□□□□□ -2.16
HLA-DQA1P01909 MTND5P17-201ENST00000418405 1603 ntBASIC1.58□□□□□ -2.16
HLA-DQA1P01909 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.58□□□□□ -2.16
HLA-DQA1P01909 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
HLA-DQA1P01909 SNORD114-19-201ENST00000363072 75 ntBASIC1.58□□□□□ -2.16
HLA-DQA1P01909 RNU6-529P-201ENST00000363383 104 ntBASIC1.58□□□□□ -2.16
HLA-DQA1P01909 Y_RNA.201-201ENST00000364052 96 ntBASIC1.58□□□□□ -2.16
HLA-DQA1P01909 SNORD116-20-201ENST00000384529 92 ntBASIC1.58□□□□□ -2.16
HLA-DQA1P01909 RPL17P50-201ENST00000396131 546 ntBASIC1.58□□□□□ -2.16
HLA-DQA1P01909 MIR1302-8-201ENST00000408342 128 ntBASIC1.58□□□□□ -2.16
HLA-DQA1P01909 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.58□□□□□ -2.16
HLA-DQA1P01909 OR6C66P-201ENST00000414917 930 ntBASIC1.58□□□□□ -2.16
HLA-DQA1P01909 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.58□□□□□ -2.16
HLA-DQA1P01909 AC138623.1-201ENST00000418060 216 ntBASIC1.58□□□□□ -2.16
HLA-DQA1P01909 C1DP2-201ENST00000418167 426 ntBASIC1.58□□□□□ -2.16
HLA-DQA1P01909 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.58□□□□□ -2.16
HLA-DQA1P01909 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.58□□□□□ -2.16
HLA-DQA1P01909 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.58□□□□□ -2.16
HLA-DQA1P01909 GPM6BP3-201ENST00000442797 145 ntBASIC1.58□□□□□ -2.16
HLA-DQA1P01909 AC104058.1-201ENST00000448028 297 ntBASIC1.58□□□□□ -2.16
HLA-DQA1P01909 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.58□□□□□ -2.16
HLA-DQA1P01909 RPS3P1-201ENST00000456781 192 ntBASIC1.58□□□□□ -2.16
HLA-DQA1P01909 AL162395.1-201ENST00000457882 422 ntBASIC1.58□□□□□ -2.16
HLA-DQA1P01909 MTCO2P6-201ENST00000463134 685 ntBASIC1.58□□□□□ -2.16
HLA-DQA1P01909 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.58□□□□□ -2.16
HLA-DQA1P01909 RN7SL636P-201ENST00000497504 294 ntBASIC1.58□□□□□ -2.16
HLA-DQA1P01909 AC091965.2-201ENST00000512324 613 ntBASIC1.58□□□□□ -2.16
HLA-DQA1P01909 MTCO3P28-201ENST00000513351 515 ntBASIC1.58□□□□□ -2.16
HLA-DQA1P01909 RNA5SP200-201ENST00000516360 103 ntBASIC1.58□□□□□ -2.16
HLA-DQA1P01909 RNU6-410P-201ENST00000517006 107 ntBASIC1.58□□□□□ -2.16
HLA-DQA1P01909 SNORA31.23-201ENST00000517219 133 ntBASIC1.58□□□□□ -2.16
HLA-DQA1P01909 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.58□□□□□ -2.16
HLA-DQA1P01909 AP004607.1-201ENST00000524456 203 ntBASIC1.58□□□□□ -2.16
HLA-DQA1P01909 FAM92A1P1-201ENST00000528023 890 ntBASIC1.58□□□□□ -2.16
HLA-DQA1P01909 AP002453.2-201ENST00000533503 320 ntBASIC1.58□□□□□ -2.16
HLA-DQA1P01909 AC007834.2-201ENST00000536310 343 ntBASIC1.58□□□□□ -2.16
HLA-DQA1P01909 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.58□□□□□ -2.16
HLA-DQA1P01909 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC1.58□□□□□ -2.16
HLA-DQA1P01909 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.58□□□□□ -2.16
HLA-DQA1P01909 AC027176.1-201ENST00000560204 514 ntBASIC1.58□□□□□ -2.16
HLA-DQA1P01909 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.58□□□□□ -2.16
HLA-DQA1P01909 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.58□□□□□ -2.16
HLA-DQA1P01909 MIR4775-201ENST00000581168 75 ntBASIC1.58□□□□□ -2.16
HLA-DQA1P01909 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
HLA-DQA1P01909 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.58□□□□□ -2.16
HLA-DQA1P01909 AC138649.3-201ENST00000622154 254 ntBASIC1.58□□□□□ -2.16
HLA-DQA1P01909 IGHVIII-44-202ENST00000636235 289 ntBASIC1.58□□□□□ -2.16
HLA-DQA1P01909 RNU4-91P-201ENST00000364778 135 ntBASIC1.57□□□□□ -2.16
HLA-DQA1P01909 RNU6-550P-201ENST00000391057 101 ntBASIC1.57□□□□□ -2.16
HLA-DQA1P01909 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
HLA-DQA1P01909 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
HLA-DQA1P01909 AL445529.1-201ENST00000398713 389 ntBASIC1.57□□□□□ -2.16
HLA-DQA1P01909 AL030996.1-201ENST00000411430 235 ntBASIC1.57□□□□□ -2.16
HLA-DQA1P01909 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.57□□□□□ -2.16
HLA-DQA1P01909 CYCSP33-201ENST00000414485 327 ntBASIC1.57□□□□□ -2.16
HLA-DQA1P01909 AL161788.1-201ENST00000441805 169 ntBASIC1.57□□□□□ -2.16
HLA-DQA1P01909 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.57□□□□□ -2.16
HLA-DQA1P01909 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.57□□□□□ -2.16
HLA-DQA1P01909 AC244505.5-201ENST00000443639 207 ntBASIC1.57□□□□□ -2.16
HLA-DQA1P01909 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.57□□□□□ -2.16
HLA-DQA1P01909 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.57□□□□□ -2.16
HLA-DQA1P01909 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.57□□□□□ -2.16
HLA-DQA1P01909 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms