Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 RNU6-266P-201ENST00000364225 107 ntBASIC4.23□□□□□ -1.73
RAPGEF3O95398 RNU6-1179P-201ENST00000384667 107 ntBASIC4.23□□□□□ -1.73
RAPGEF3O95398 RNU6ATAC3P-201ENST00000387974 126 ntBASIC4.23□□□□□ -1.73
RAPGEF3O95398 RNU6-328P-201ENST00000390887 106 ntBASIC4.23□□□□□ -1.73
RAPGEF3O95398 FAT1P1-201ENST00000406588 507 ntBASIC4.23□□□□□ -1.73
RAPGEF3O95398 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.23□□□□□ -1.73
RAPGEF3O95398 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC4.23□□□□□ -1.73
RAPGEF3O95398 MTND3P25-201ENST00000509243 135 ntBASIC4.23□□□□□ -1.73
RAPGEF3O95398 RNU1-143P-201ENST00000516296 146 ntBASIC4.23□□□□□ -1.73
RAPGEF3O95398 RNU6-273P-201ENST00000516937 96 ntBASIC4.23□□□□□ -1.73
RAPGEF3O95398 RNU6-323P-201ENST00000521915 107 ntBASIC4.23□□□□□ -1.73
RAPGEF3O95398 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.23□□□□□ -1.73
RAPGEF3O95398 MIR4790-201ENST00000577799 79 ntBASIC4.23□□□□□ -1.73
RAPGEF3O95398 U1.23-201ENST00000610293 146 ntBASIC4.23□□□□□ -1.73
RAPGEF3O95398 AL110115.1-201ENST00000614396 364 ntBASIC4.23□□□□□ -1.73
RAPGEF3O95398 RNU1-68P-201ENST00000615382 146 ntBASIC4.23□□□□□ -1.73
RAPGEF3O95398 U1.39-201ENST00000621562 146 ntBASIC4.23□□□□□ -1.73
RAPGEF3O95398 AC244205.2-202ENST00000635781 342 ntBASIC4.23□□□□□ -1.73
RAPGEF3O95398 AC241585.2-209ENST00000638217 143 ntBASIC4.23□□□□□ -1.73
RAPGEF3O95398 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RAPGEF3O95398 ZNF519P1-201ENST00000449011 1626 ntBASIC4.22□□□□□ -1.73
RAPGEF3O95398 RN7SKP158-201ENST00000410453 326 ntBASIC4.22□□□□□ -1.73
RAPGEF3O95398 AL359672.1-201ENST00000442302 409 ntBASIC4.22□□□□□ -1.73
RAPGEF3O95398 MTND1P17-201ENST00000448961 204 ntBASIC4.22□□□□□ -1.73
RAPGEF3O95398 NDUFB1P2-201ENST00000449477 176 ntBASIC4.22□□□□□ -1.73
RAPGEF3O95398 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC4.22□□□□□ -1.73
RAPGEF3O95398 CECR9-201ENST00000453421 199 ntBASIC4.22□□□□□ -1.73
RAPGEF3O95398 Y_RNA.632-201ENST00000459189 102 ntBASIC4.22□□□□□ -1.73
RAPGEF3O95398 AC008526.1-201ENST00000509149 338 ntBASIC4.22□□□□□ -1.73
RAPGEF3O95398 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.22□□□□□ -1.73
RAPGEF3O95398 COPS8P3-201ENST00000526024 482 ntBASIC4.22□□□□□ -1.73
RAPGEF3O95398 TRAV37-201ENST00000553906 342 ntBASIC4.22□□□□□ -1.73
RAPGEF3O95398 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.22□□□□□ -1.73
RAPGEF3O95398 AC100830.2-201ENST00000581636 240 ntBASIC4.22□□□□□ -1.73
RAPGEF3O95398 POLR3GP2-201ENST00000588366 668 ntBASIC4.22□□□□□ -1.73
RAPGEF3O95398 AC002044.1-201ENST00000606707 158 ntBASIC4.22□□□□□ -1.73
RAPGEF3O95398 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC4.22□□□□□ -1.73
RAPGEF3O95398 AL160413.1-201ENST00000622780 310 ntBASIC4.22□□□□□ -1.73
RAPGEF3O95398 AC092435.3-201ENST00000565538 3654 ntBASIC4.22□□□□□ -1.73
RAPGEF3O95398 AC002546.1-201ENST00000588041 2504 ntBASIC4.22□□□□□ -1.73
RAPGEF3O95398 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC4.21□□□□□ -1.73
RAPGEF3O95398 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
RAPGEF3O95398 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.21□□□□□ -1.73
RAPGEF3O95398 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
RAPGEF3O95398 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
RAPGEF3O95398 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
RAPGEF3O95398 RNU6-562P-201ENST00000362731 107 ntBASIC4.21□□□□□ -1.74
RAPGEF3O95398 Y_RNA.58-201ENST00000362807 102 ntBASIC4.21□□□□□ -1.74
RAPGEF3O95398 Y_RNA.154-201ENST00000363624 102 ntBASIC4.21□□□□□ -1.74
RAPGEF3O95398 RNY3P1-201ENST00000365085 102 ntBASIC4.21□□□□□ -1.74
RAPGEF3O95398 RNY3-201ENST00000365484 102 ntBASIC4.21□□□□□ -1.74
RAPGEF3O95398 Y_RNA.490-201ENST00000384413 102 ntBASIC4.21□□□□□ -1.74
RAPGEF3O95398 RNU6ATAC15P-201ENST00000408279 121 ntBASIC4.21□□□□□ -1.74
RAPGEF3O95398 MIR548F5-201ENST00000408421 86 ntBASIC4.21□□□□□ -1.74
RAPGEF3O95398 RNU2-68P-201ENST00000410878 191 ntBASIC4.21□□□□□ -1.74
RAPGEF3O95398 RPL37P10-201ENST00000412884 288 ntBASIC4.21□□□□□ -1.74
RAPGEF3O95398 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.21□□□□□ -1.74
RAPGEF3O95398 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.21□□□□□ -1.74
RAPGEF3O95398 RNU7-138P-201ENST00000459479 64 ntBASIC4.21□□□□□ -1.74
RAPGEF3O95398 RN7SL330P-201ENST00000469709 307 ntBASIC4.21□□□□□ -1.74
RAPGEF3O95398 AC087884.1-201ENST00000469738 328 ntBASIC4.21□□□□□ -1.74
RAPGEF3O95398 MTND5P5-201ENST00000503764 376 ntBASIC4.21□□□□□ -1.74
RAPGEF3O95398 IGKV3-31-201ENST00000523109 329 ntBASIC4.21□□□□□ -1.74
RAPGEF3O95398 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC4.21□□□□□ -1.74
RAPGEF3O95398 DEFB122-202ENST00000569013 197 ntBASIC4.21□□□□□ -1.74
RAPGEF3O95398 AC007256.1-201ENST00000392253 2765 ntBASIC4.21□□□□□ -1.74
RAPGEF3O95398 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.21□□□□□ -1.74
RAPGEF3O95398 AC009487.2-201ENST00000420969 6821 ntBASIC4.2□□□□□ -1.74
RAPGEF3O95398 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
RAPGEF3O95398 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
RAPGEF3O95398 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RAPGEF3O95398 MIR423-201ENST00000362201 94 ntBASIC4.2□□□□□ -1.74
RAPGEF3O95398 RNU6-1303P-201ENST00000364841 107 ntBASIC4.2□□□□□ -1.74
RAPGEF3O95398 Y_RNA.315-201ENST00000365117 102 ntBASIC4.2□□□□□ -1.74
RAPGEF3O95398 RNU6-214P-201ENST00000384130 107 ntBASIC4.2□□□□□ -1.74
RAPGEF3O95398 RNU6-1297P-201ENST00000384415 104 ntBASIC4.2□□□□□ -1.74
RAPGEF3O95398 RNU6-482P-201ENST00000391068 107 ntBASIC4.2□□□□□ -1.74
RAPGEF3O95398 RNU2-3P-201ENST00000410144 191 ntBASIC4.2□□□□□ -1.74
RAPGEF3O95398 CYCSP33-201ENST00000414485 327 ntBASIC4.2□□□□□ -1.74
RAPGEF3O95398 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.2□□□□□ -1.74
RAPGEF3O95398 MTCO2P27-201ENST00000420740 428 ntBASIC4.2□□□□□ -1.74
RAPGEF3O95398 AL512844.2-201ENST00000433990 593 ntBASIC4.2□□□□□ -1.74
RAPGEF3O95398 SNRPEP9-201ENST00000436794 238 ntBASIC4.2□□□□□ -1.74
RAPGEF3O95398 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC4.2□□□□□ -1.74
RAPGEF3O95398 SRI-210ENST00000490437 570 ntTSL 2 BASIC4.2□□□□□ -1.74
RAPGEF3O95398 AC026801.1-201ENST00000497178 464 ntBASIC4.2□□□□□ -1.74
RAPGEF3O95398 MIR892C-201ENST00000516410 77 ntBASIC4.2□□□□□ -1.74
RAPGEF3O95398 RNA5SP165-201ENST00000517142 115 ntBASIC4.2□□□□□ -1.74
RAPGEF3O95398 AP005639.2-201ENST00000527592 928 ntBASIC4.2□□□□□ -1.74
RAPGEF3O95398 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.2□□□□□ -1.74
RAPGEF3O95398 AC016727.1-205ENST00000605437 569 ntBASIC4.2□□□□□ -1.74
RAPGEF3O95398 AL591516.1-201ENST00000611326 274 ntBASIC4.2□□□□□ -1.74
RAPGEF3O95398 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RAPGEF3O95398 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC4.2□□□□□ -1.74
RAPGEF3O95398 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RAPGEF3O95398 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
RAPGEF3O95398 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.19□□□□□ -1.74
RAPGEF3O95398 AL136164.4-201ENST00000625013 2135 ntBASIC4.19□□□□□ -1.74
RAPGEF3O95398 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
RAPGEF3O95398 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms