Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.74□□□□□ -1.97
NKX2-2O95096 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
NKX2-2O95096 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
NKX2-2O95096 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.74□□□□□ -1.97
NKX2-2O95096 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.74□□□□□ -1.97
NKX2-2O95096 MTND5P19-201ENST00000424872 1794 ntBASIC2.74□□□□□ -1.97
NKX2-2O95096 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
NKX2-2O95096 AC073346.2-201ENST00000624724 2058 ntBASIC2.73□□□□□ -1.97
NKX2-2O95096 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.73□□□□□ -1.97
NKX2-2O95096 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
NKX2-2O95096 MIR422A-201ENST00000362286 90 ntBASIC2.73□□□□□ -1.97
NKX2-2O95096 RNU6-254P-201ENST00000363377 107 ntBASIC2.73□□□□□ -1.97
NKX2-2O95096 SNORD113-7-201ENST00000363762 77 ntBASIC2.73□□□□□ -1.97
NKX2-2O95096 SNORD116-20-201ENST00000384529 92 ntBASIC2.73□□□□□ -1.97
NKX2-2O95096 AL162578.1-201ENST00000406202 378 ntBASIC2.73□□□□□ -1.97
NKX2-2O95096 AL513185.2-201ENST00000425543 193 ntBASIC2.73□□□□□ -1.97
NKX2-2O95096 AC093151.1-201ENST00000427711 313 ntBASIC2.73□□□□□ -1.97
NKX2-2O95096 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.73□□□□□ -1.97
NKX2-2O95096 AC009296.1-201ENST00000443146 155 ntBASIC2.73□□□□□ -1.97
NKX2-2O95096 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.73□□□□□ -1.97
NKX2-2O95096 AP001324.2-201ENST00000461163 319 ntBASIC2.73□□□□□ -1.97
NKX2-2O95096 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.73□□□□□ -1.97
NKX2-2O95096 AC009812.2-201ENST00000517657 457 ntBASIC2.73□□□□□ -1.97
NKX2-2O95096 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.73□□□□□ -1.97
NKX2-2O95096 RNU6-323P-201ENST00000521915 107 ntBASIC2.73□□□□□ -1.97
NKX2-2O95096 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.73□□□□□ -1.97
NKX2-2O95096 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.73□□□□□ -1.97
NKX2-2O95096 AP001094.1-201ENST00000579805 193 ntBASIC2.73□□□□□ -1.97
NKX2-2O95096 MIR5195-201ENST00000583555 115 ntBASIC2.73□□□□□ -1.97
NKX2-2O95096 AC018638.8-201ENST00000588755 281 ntBASIC2.73□□□□□ -1.97
NKX2-2O95096 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
NKX2-2O95096 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.73□□□□□ -1.97
NKX2-2O95096 AC100810.6-201ENST00000638068 285 ntBASIC2.73□□□□□ -1.97
NKX2-2O95096 AL109809.4-201ENST00000603520 2185 ntBASIC2.73□□□□□ -1.97
NKX2-2O95096 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.73□□□□□ -1.97
NKX2-2O95096 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.73□□□□□ -1.97
NKX2-2O95096 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
NKX2-2O95096 AC138393.1-203ENST00000327086 343 ntBASIC2.72□□□□□ -1.97
NKX2-2O95096 MIR208A-201ENST00000362287 71 ntBASIC2.72□□□□□ -1.97
NKX2-2O95096 RNU6-1148P-201ENST00000410992 104 ntBASIC2.72□□□□□ -1.97
NKX2-2O95096 RN7SKP58-201ENST00000411010 305 ntBASIC2.72□□□□□ -1.97
NKX2-2O95096 MTND1P23-201ENST00000416931 372 ntBASIC2.72□□□□□ -1.97
NKX2-2O95096 AC074117.2-201ENST00000417130 397 ntBASIC2.72□□□□□ -1.97
NKX2-2O95096 AL513043.1-201ENST00000439124 535 ntBASIC2.72□□□□□ -1.97
NKX2-2O95096 AL359672.1-201ENST00000442302 409 ntBASIC2.72□□□□□ -1.97
NKX2-2O95096 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.72□□□□□ -1.97
NKX2-2O95096 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.72□□□□□ -1.97
NKX2-2O95096 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.72□□□□□ -1.97
NKX2-2O95096 AL117351.2-201ENST00000513571 157 ntBASIC2.72□□□□□ -1.97
NKX2-2O95096 RNA5SP380-201ENST00000517190 98 ntBASIC2.72□□□□□ -1.97
NKX2-2O95096 SNORA31.23-201ENST00000517219 133 ntBASIC2.72□□□□□ -1.97
NKX2-2O95096 RN7SKP57-201ENST00000517248 293 ntBASIC2.72□□□□□ -1.97
NKX2-2O95096 AP005597.4-201ENST00000526762 229 ntBASIC2.72□□□□□ -1.97
NKX2-2O95096 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.72□□□□□ -1.97
NKX2-2O95096 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.72□□□□□ -1.97
NKX2-2O95096 AP000763.2-201ENST00000540641 163 ntBASIC2.72□□□□□ -1.97
NKX2-2O95096 AC107016.2-201ENST00000547968 190 ntBASIC2.72□□□□□ -1.97
NKX2-2O95096 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.72□□□□□ -1.97
NKX2-2O95096 MIR4801-201ENST00000582704 82 ntBASIC2.72□□□□□ -1.97
NKX2-2O95096 BNIP3P10-201ENST00000605360 577 ntBASIC2.72□□□□□ -1.97
NKX2-2O95096 AL121917.1-203ENST00000605534 577 ntBASIC2.72□□□□□ -1.97
NKX2-2O95096 AL442067.2-201ENST00000614033 363 ntBASIC2.72□□□□□ -1.97
NKX2-2O95096 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.72□□□□□ -1.97
NKX2-2O95096 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
NKX2-2O95096 AC010329.5-201ENST00000623497 2174 ntBASIC2.72□□□□□ -1.97
NKX2-2O95096 AL353743.1-202ENST00000431724 1695 ntBASIC2.72□□□□□ -1.97
NKX2-2O95096 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
NKX2-2O95096 FAM35CP-201ENST00000554755 2470 ntBASIC2.71□□□□□ -1.97
NKX2-2O95096 AC000403.1-201ENST00000613696 3585 ntBASIC2.71□□□□□ -1.97
NKX2-2O95096 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.71□□□□□ -1.98
NKX2-2O95096 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
NKX2-2O95096 AC096644.4-201ENST00000563417 2912 ntBASIC2.71□□□□□ -1.98
NKX2-2O95096 AC093010.3-201ENST00000570269 15214 ntBASIC2.71□□□□□ -1.98
NKX2-2O95096 RBBP8P1-201ENST00000449447 1844 ntBASIC2.71□□□□□ -1.98
NKX2-2O95096 Y_RNA.86-201ENST00000363020 111 ntBASIC2.71□□□□□ -1.98
NKX2-2O95096 RNU6-105P-201ENST00000363909 104 ntBASIC2.71□□□□□ -1.98
NKX2-2O95096 SNORA9.2-201ENST00000365361 133 ntBASIC2.71□□□□□ -1.98
NKX2-2O95096 Y_RNA.414-201ENST00000384011 101 ntBASIC2.71□□□□□ -1.98
NKX2-2O95096 RNU6-622P-201ENST00000384272 103 ntBASIC2.71□□□□□ -1.98
NKX2-2O95096 AL138885.1-201ENST00000405921 675 ntBASIC2.71□□□□□ -1.98
NKX2-2O95096 AL356776.1-201ENST00000406574 447 ntBASIC2.71□□□□□ -1.98
NKX2-2O95096 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.71□□□□□ -1.98
NKX2-2O95096 AL139413.1-201ENST00000421309 217 ntBASIC2.71□□□□□ -1.98
NKX2-2O95096 MICF-203ENST00000432679 129 ntBASIC2.71□□□□□ -1.98
NKX2-2O95096 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.71□□□□□ -1.98
NKX2-2O95096 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.71□□□□□ -1.98
NKX2-2O95096 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.71□□□□□ -1.98
NKX2-2O95096 AC091179.1-201ENST00000461606 579 ntBASIC2.71□□□□□ -1.98
NKX2-2O95096 AC133134.1-201ENST00000466800 359 ntBASIC2.71□□□□□ -1.98
NKX2-2O95096 AP004217.1-201ENST00000480579 346 ntBASIC2.71□□□□□ -1.98
NKX2-2O95096 AP001025.1-201ENST00000486139 332 ntBASIC2.71□□□□□ -1.98
NKX2-2O95096 PRDX4P1-201ENST00000507189 574 ntBASIC2.71□□□□□ -1.98
NKX2-2O95096 RNU6-377P-201ENST00000515965 102 ntBASIC2.71□□□□□ -1.98
NKX2-2O95096 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.71□□□□□ -1.98
NKX2-2O95096 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.71□□□□□ -1.98
NKX2-2O95096 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.71□□□□□ -1.98
NKX2-2O95096 AL137843.1-201ENST00000605078 385 ntBASIC2.71□□□□□ -1.98
NKX2-2O95096 AC021646.1-201ENST00000605469 484 ntBASIC2.71□□□□□ -1.98
NKX2-2O95096 AC004832.5-201ENST00000608677 401 ntBASIC2.71□□□□□ -1.98
NKX2-2O95096 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms