Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 AL031601.2-202ENST00000622650 282 ntBASIC3.62□□□□□ -1.83
CDKL5O76039 AC018692.3-201ENST00000623929 123 ntBASIC3.62□□□□□ -1.83
CDKL5O76039 Z99571.1-201ENST00000636677 394 ntBASIC3.62□□□□□ -1.83
CDKL5O76039 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.62□□□□□ -1.83
CDKL5O76039 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDKL5O76039 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDKL5O76039 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.62□□□□□ -1.83
CDKL5O76039 OR4G2P-202ENST00000641004 1759 ntBASIC3.61□□□□□ -1.83
CDKL5O76039 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDKL5O76039 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDKL5O76039 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.61□□□□□ -1.83
CDKL5O76039 UBE2L2-201ENST00000254302 429 ntBASIC3.61□□□□□ -1.83
CDKL5O76039 RNU5A-1-201ENST00000362698 116 ntBASIC3.61□□□□□ -1.83
CDKL5O76039 SNORA46-201ENST00000384762 135 ntBASIC3.61□□□□□ -1.83
CDKL5O76039 SNORD73A-201ENST00000386062 65 ntBASIC3.61□□□□□ -1.83
CDKL5O76039 SAR1AP2-201ENST00000392696 594 ntBASIC3.61□□□□□ -1.83
CDKL5O76039 AL513331.1-201ENST00000411908 397 ntBASIC3.61□□□□□ -1.83
CDKL5O76039 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.61□□□□□ -1.83
CDKL5O76039 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.61□□□□□ -1.83
CDKL5O76039 AC243428.1-201ENST00000421099 264 ntBASIC3.61□□□□□ -1.83
CDKL5O76039 AC244098.2-201ENST00000422068 99 ntBASIC3.61□□□□□ -1.83
CDKL5O76039 MTCYBP10-201ENST00000424905 650 ntBASIC3.61□□□□□ -1.83
CDKL5O76039 USMG5P1-201ENST00000425964 177 ntBASIC3.61□□□□□ -1.83
CDKL5O76039 MTCYBP9-201ENST00000431021 303 ntBASIC3.61□□□□□ -1.83
CDKL5O76039 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.61□□□□□ -1.83
CDKL5O76039 UQCRHP3-201ENST00000451503 251 ntBASIC3.61□□□□□ -1.83
CDKL5O76039 BTF3P15-201ENST00000455606 336 ntBASIC3.61□□□□□ -1.83
CDKL5O76039 RN7SL807P-201ENST00000470923 297 ntBASIC3.61□□□□□ -1.83
CDKL5O76039 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.61□□□□□ -1.83
CDKL5O76039 AC074250.1-201ENST00000511117 192 ntBASIC3.61□□□□□ -1.83
CDKL5O76039 RNU6-764P-201ENST00000516396 105 ntBASIC3.61□□□□□ -1.83
CDKL5O76039 AP004371.1-201ENST00000525240 214 ntBASIC3.61□□□□□ -1.83
CDKL5O76039 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.61□□□□□ -1.83
CDKL5O76039 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.61□□□□□ -1.83
CDKL5O76039 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.61□□□□□ -1.83
CDKL5O76039 LRRC37A5P-203ENST00000580181 585 ntBASIC3.61□□□□□ -1.83
CDKL5O76039 SNORD84-203ENST00000584275 78 ntBASIC3.61□□□□□ -1.83
CDKL5O76039 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.61□□□□□ -1.83
CDKL5O76039 AL133393.1-201ENST00000603277 287 ntBASIC3.61□□□□□ -1.83
CDKL5O76039 NUTF2P8-201ENST00000604593 363 ntBASIC3.61□□□□□ -1.83
CDKL5O76039 RNU6-85P-201ENST00000605989 107 ntBASIC3.61□□□□□ -1.83
CDKL5O76039 AC087588.2-201ENST00000617667 426 ntBASIC3.61□□□□□ -1.83
CDKL5O76039 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
CDKL5O76039 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.61□□□□□ -1.83
CDKL5O76039 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CDKL5O76039 AL136164.4-201ENST00000625013 2135 ntBASIC3.61□□□□□ -1.83
CDKL5O76039 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDKL5O76039 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDKL5O76039 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.6□□□□□ -1.83
CDKL5O76039 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.6□□□□□ -1.83
CDKL5O76039 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.6□□□□□ -1.83
CDKL5O76039 MIR148B-201ENST00000362252 99 ntBASIC3.6□□□□□ -1.83
CDKL5O76039 Y_RNA.2-201ENST00000362330 96 ntBASIC3.6□□□□□ -1.83
CDKL5O76039 Y_RNA.151-201ENST00000363566 112 ntBASIC3.6□□□□□ -1.83
CDKL5O76039 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CDKL5O76039 RNU6-842P-201ENST00000384269 107 ntBASIC3.6□□□□□ -1.83
CDKL5O76039 MIR34B-201ENST00000385076 84 ntBASIC3.6□□□□□ -1.83
CDKL5O76039 RNA5SP274-201ENST00000410484 108 ntBASIC3.6□□□□□ -1.83
CDKL5O76039 TOMM22P1-201ENST00000418578 312 ntBASIC3.6□□□□□ -1.83
CDKL5O76039 AC008267.5-201ENST00000424928 265 ntBASIC3.6□□□□□ -1.83
CDKL5O76039 UBE2V1P4-201ENST00000425374 344 ntBASIC3.6□□□□□ -1.83
CDKL5O76039 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.6□□□□□ -1.83
CDKL5O76039 RPL31P60-201ENST00000478450 367 ntBASIC3.6□□□□□ -1.83
CDKL5O76039 AC022493.2-201ENST00000506122 481 ntBASIC3.6□□□□□ -1.83
CDKL5O76039 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.6□□□□□ -1.83
CDKL5O76039 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CDKL5O76039 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.6□□□□□ -1.83
CDKL5O76039 AC024220.1-201ENST00000603675 484 ntBASIC3.6□□□□□ -1.83
CDKL5O76039 AL162373.1-201ENST00000620433 407 ntBASIC3.6□□□□□ -1.83
CDKL5O76039 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.6□□□□□ -1.83
CDKL5O76039 AC138305.3-201ENST00000624988 240 ntBASIC3.6□□□□□ -1.83
CDKL5O76039 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.6□□□□□ -1.83
CDKL5O76039 AL512643.1-201ENST00000635735 524 ntBASIC3.6□□□□□ -1.83
CDKL5O76039 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.6□□□□□ -1.83
CDKL5O76039 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CDKL5O76039 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CDKL5O76039 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.59□□□□□ -1.83
CDKL5O76039 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.59□□□□□ -1.83
CDKL5O76039 RNU6-512P-201ENST00000364438 103 ntBASIC3.59□□□□□ -1.83
CDKL5O76039 RNU6-1329P-201ENST00000365664 107 ntBASIC3.59□□□□□ -1.83
CDKL5O76039 RNVU1-14-201ENST00000384770 164 ntBASIC3.59□□□□□ -1.83
CDKL5O76039 MIR517A-201ENST00000385001 87 ntBASIC3.59□□□□□ -1.83
CDKL5O76039 MIR514A1-201ENST00000385133 98 ntBASIC3.59□□□□□ -1.83
CDKL5O76039 RNU2-3P-201ENST00000410144 191 ntBASIC3.59□□□□□ -1.83
CDKL5O76039 RNU6-293P-201ENST00000411259 106 ntBASIC3.59□□□□□ -1.83
CDKL5O76039 RNU6-607P-201ENST00000411283 108 ntBASIC3.59□□□□□ -1.83
CDKL5O76039 CYCSP33-201ENST00000414485 327 ntBASIC3.59□□□□□ -1.83
CDKL5O76039 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.59□□□□□ -1.83
CDKL5O76039 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.59□□□□□ -1.83
CDKL5O76039 AC091390.3-201ENST00000426478 338 ntBASIC3.59□□□□□ -1.83
CDKL5O76039 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.59□□□□□ -1.83
CDKL5O76039 AL645568.3-201ENST00000433683 316 ntBASIC3.59□□□□□ -1.83
CDKL5O76039 RN7SL283P-201ENST00000489055 303 ntBASIC3.59□□□□□ -1.83
CDKL5O76039 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.59□□□□□ -1.83
CDKL5O76039 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.59□□□□□ -1.83
CDKL5O76039 MTCO2P24-201ENST00000515611 426 ntBASIC3.59□□□□□ -1.83
CDKL5O76039 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.59□□□□□ -1.83
CDKL5O76039 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.59□□□□□ -1.83
CDKL5O76039 AC008269.2-201ENST00000561915 1105 ntBASIC3.59□□□□□ -1.83
CDKL5O76039 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms