Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.72□□□□□ -2.13
NPHP4O75161 MTND4P16-201ENST00000466108 1367 ntBASIC1.72□□□□□ -2.13
NPHP4O75161 Z75746.1-201ENST00000440243 2080 ntBASIC1.72□□□□□ -2.13
NPHP4O75161 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.71□□□□□ -2.14
NPHP4O75161 RNU6-37P-201ENST00000362692 107 ntBASIC1.71□□□□□ -2.14
NPHP4O75161 RNU4-92P-201ENST00000363783 136 ntBASIC1.71□□□□□ -2.14
NPHP4O75161 RNU5A-8P-201ENST00000364102 114 ntBASIC1.71□□□□□ -2.14
NPHP4O75161 RNU6-11P-201ENST00000364234 107 ntBASIC1.71□□□□□ -2.14
NPHP4O75161 MIR1305-201ENST00000408300 86 ntBASIC1.71□□□□□ -2.14
NPHP4O75161 RN7SKP158-201ENST00000410453 326 ntBASIC1.71□□□□□ -2.14
NPHP4O75161 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.71□□□□□ -2.14
NPHP4O75161 GPM6BP3-201ENST00000442797 145 ntBASIC1.71□□□□□ -2.14
NPHP4O75161 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.71□□□□□ -2.14
NPHP4O75161 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.71□□□□□ -2.14
NPHP4O75161 RPL23AP35-201ENST00000451906 501 ntBASIC1.71□□□□□ -2.14
NPHP4O75161 RPL36AP48-201ENST00000485521 314 ntBASIC1.71□□□□□ -2.14
NPHP4O75161 AC093852.1-201ENST00000503587 266 ntBASIC1.71□□□□□ -2.14
NPHP4O75161 RNA5SP112-201ENST00000515937 99 ntBASIC1.71□□□□□ -2.14
NPHP4O75161 RNA5SP216-201ENST00000516111 123 ntBASIC1.71□□□□□ -2.14
NPHP4O75161 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.71□□□□□ -2.14
NPHP4O75161 AC009902.1-201ENST00000519351 183 ntBASIC1.71□□□□□ -2.14
NPHP4O75161 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.71□□□□□ -2.14
NPHP4O75161 AP004247.1-201ENST00000531556 1289 ntBASIC1.71□□□□□ -2.14
NPHP4O75161 MTCYBP22-201ENST00000603788 447 ntBASIC1.71□□□□□ -2.14
NPHP4O75161 AL592221.1-201ENST00000605266 382 ntBASIC1.71□□□□□ -2.14
NPHP4O75161 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.71□□□□□ -2.14
NPHP4O75161 AL139418.1-201ENST00000613613 177 ntBASIC1.71□□□□□ -2.14
NPHP4O75161 AC010608.3-201ENST00000625048 527 ntBASIC1.71□□□□□ -2.14
NPHP4O75161 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.71□□□□□ -2.14
NPHP4O75161 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
NPHP4O75161 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.71□□□□□ -2.14
NPHP4O75161 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.71□□□□□ -2.14
NPHP4O75161 MIR373-201ENST00000362273 69 ntBASIC1.7□□□□□ -2.14
NPHP4O75161 RNU6-486P-201ENST00000363116 107 ntBASIC1.7□□□□□ -2.14
NPHP4O75161 RNU6-1284P-201ENST00000363701 100 ntBASIC1.7□□□□□ -2.14
NPHP4O75161 RNU6-1280P-201ENST00000365211 107 ntBASIC1.7□□□□□ -2.14
NPHP4O75161 RNU6-898P-201ENST00000365627 104 ntBASIC1.7□□□□□ -2.14
NPHP4O75161 RNY1P4-201ENST00000384595 115 ntBASIC1.7□□□□□ -2.14
NPHP4O75161 RNU6-636P-201ENST00000384598 107 ntBASIC1.7□□□□□ -2.14
NPHP4O75161 AL356379.1-201ENST00000414105 126 ntBASIC1.7□□□□□ -2.14
NPHP4O75161 SNRPEP10-201ENST00000420249 274 ntBASIC1.7□□□□□ -2.14
NPHP4O75161 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC1.7□□□□□ -2.14
NPHP4O75161 TIMM9P1-201ENST00000436122 256 ntBASIC1.7□□□□□ -2.14
NPHP4O75161 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.7□□□□□ -2.14
NPHP4O75161 AL009048.1-201ENST00000450437 298 ntBASIC1.7□□□□□ -2.14
NPHP4O75161 AL583843.1-201ENST00000456070 346 ntBASIC1.7□□□□□ -2.14
NPHP4O75161 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.7□□□□□ -2.14
NPHP4O75161 AC112771.1-201ENST00000463581 102 ntBASIC1.7□□□□□ -2.14
NPHP4O75161 AC091951.3-201ENST00000504093 246 ntBASIC1.7□□□□□ -2.14
NPHP4O75161 AC116655.1-201ENST00000508324 901 ntBASIC1.7□□□□□ -2.14
NPHP4O75161 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
NPHP4O75161 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.7□□□□□ -2.14
NPHP4O75161 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC1.7□□□□□ -2.14
NPHP4O75161 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC1.7□□□□□ -2.14
NPHP4O75161 AC068338.1-201ENST00000565567 176 ntBASIC1.7□□□□□ -2.14
NPHP4O75161 AC136618.2-201ENST00000575091 400 ntBASIC1.7□□□□□ -2.14
NPHP4O75161 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.7□□□□□ -2.14
NPHP4O75161 AL358072.1-201ENST00000604156 575 ntBASIC1.7□□□□□ -2.14
NPHP4O75161 AC090970.3-201ENST00000612566 866 ntBASIC1.7□□□□□ -2.14
NPHP4O75161 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
NPHP4O75161 AC024581.2-201ENST00000619986 252 ntBASIC1.7□□□□□ -2.14
NPHP4O75161 Z99571.1-201ENST00000636677 394 ntBASIC1.7□□□□□ -2.14
NPHP4O75161 AL445984.1-201ENST00000637834 659 ntBASIC1.7□□□□□ -2.14
NPHP4O75161 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
NPHP4O75161 RNU1-72P-201ENST00000362976 153 ntBASIC1.69□□□□□ -2.14
NPHP4O75161 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC1.69□□□□□ -2.14
NPHP4O75161 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.69□□□□□ -2.14
NPHP4O75161 RN7SKP51-201ENST00000410781 304 ntBASIC1.69□□□□□ -2.14
NPHP4O75161 HMGN1P14-201ENST00000412459 517 ntBASIC1.69□□□□□ -2.14
NPHP4O75161 AC005534.2-201ENST00000431047 433 ntBASIC1.69□□□□□ -2.14
NPHP4O75161 AL445305.1-201ENST00000432577 575 ntBASIC1.69□□□□□ -2.14
NPHP4O75161 RPS15AP9-201ENST00000439856 381 ntBASIC1.69□□□□□ -2.14
NPHP4O75161 FCF1P6-201ENST00000456841 595 ntBASIC1.69□□□□□ -2.14
NPHP4O75161 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.69□□□□□ -2.14
NPHP4O75161 RNU6-572P-201ENST00000516724 80 ntBASIC1.69□□□□□ -2.14
NPHP4O75161 ACA59.2-201ENST00000517061 156 ntBASIC1.69□□□□□ -2.14
NPHP4O75161 AC034229.4-201ENST00000607861 441 ntBASIC1.69□□□□□ -2.14
NPHP4O75161 AC097478.2-201ENST00000610572 514 ntBASIC1.69□□□□□ -2.14
NPHP4O75161 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.69□□□□□ -2.14
NPHP4O75161 AC068700.1-201ENST00000565862 3754 ntBASIC1.69□□□□□ -2.14
NPHP4O75161 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.69□□□□□ -2.14
NPHP4O75161 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
NPHP4O75161 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.68□□□□□ -2.14
NPHP4O75161 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.68□□□□□ -2.14
NPHP4O75161 MIR620-201ENST00000385232 95 ntBASIC1.68□□□□□ -2.14
NPHP4O75161 ELOCP9-201ENST00000418624 239 ntBASIC1.68□□□□□ -2.14
NPHP4O75161 AC097463.2-201ENST00000421074 142 ntBASIC1.68□□□□□ -2.14
NPHP4O75161 MTCO2P23-201ENST00000425216 680 ntBASIC1.68□□□□□ -2.14
NPHP4O75161 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC1.68□□□□□ -2.14
NPHP4O75161 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.68□□□□□ -2.14
NPHP4O75161 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.68□□□□□ -2.14
NPHP4O75161 AC087343.1-201ENST00000477341 475 ntBASIC1.68□□□□□ -2.14
NPHP4O75161 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.68□□□□□ -2.14
NPHP4O75161 RNU6-678P-201ENST00000516832 109 ntBASIC1.68□□□□□ -2.14
NPHP4O75161 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.68□□□□□ -2.14
NPHP4O75161 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.68□□□□□ -2.14
NPHP4O75161 AL391001.1-201ENST00000602747 715 ntBASIC1.68□□□□□ -2.14
NPHP4O75161 BNIP3P9-201ENST00000603714 553 ntBASIC1.68□□□□□ -2.14
NPHP4O75161 AC068276.1-201ENST00000605793 379 ntBASIC1.68□□□□□ -2.14
NPHP4O75161 AC108747.1-201ENST00000609508 535 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms