Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.45□□□□□ -1.7
GRIN3BO60391 NEAT1-202ENST00000501122 22743 ntBASIC4.45□□□□□ -1.7
GRIN3BO60391 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.45□□□□□ -1.7
GRIN3BO60391 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
GRIN3BO60391 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
GRIN3BO60391 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.45□□□□□ -1.7
GRIN3BO60391 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
GRIN3BO60391 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
GRIN3BO60391 AC018529.3-201ENST00000624212 2254 ntBASIC4.44□□□□□ -1.7
GRIN3BO60391 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
GRIN3BO60391 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
GRIN3BO60391 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
GRIN3BO60391 NCAPGP1-201ENST00000505112 1814 ntBASIC4.44□□□□□ -1.7
GRIN3BO60391 AC008568.2-201ENST00000623862 2313 ntBASIC4.44□□□□□ -1.7
GRIN3BO60391 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
GRIN3BO60391 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.44□□□□□ -1.7
GRIN3BO60391 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
GRIN3BO60391 MIR422A-201ENST00000362286 90 ntBASIC4.44□□□□□ -1.7
GRIN3BO60391 RNU6-238P-201ENST00000363313 106 ntBASIC4.44□□□□□ -1.7
GRIN3BO60391 RNU6-1317P-201ENST00000364582 104 ntBASIC4.44□□□□□ -1.7
GRIN3BO60391 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
GRIN3BO60391 Y_RNA.396-201ENST00000383949 103 ntBASIC4.44□□□□□ -1.7
GRIN3BO60391 MIR93-201ENST00000385024 80 ntBASIC4.44□□□□□ -1.7
GRIN3BO60391 MORN2-203ENST00000409131 544 ntTSL 5 BASIC4.44□□□□□ -1.7
GRIN3BO60391 AC092573.2-201ENST00000434546 243 ntBASIC4.44□□□□□ -1.7
GRIN3BO60391 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.44□□□□□ -1.7
GRIN3BO60391 AC073910.1-201ENST00000445047 438 ntBASIC4.44□□□□□ -1.7
GRIN3BO60391 PCNPP5-201ENST00000452246 481 ntBASIC4.44□□□□□ -1.7
GRIN3BO60391 AC013470.1-201ENST00000453438 462 ntBASIC4.44□□□□□ -1.7
GRIN3BO60391 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.44□□□□□ -1.7
GRIN3BO60391 RPL22P13-201ENST00000493291 347 ntBASIC4.44□□□□□ -1.7
GRIN3BO60391 Y_RNA.687-201ENST00000516558 91 ntBASIC4.44□□□□□ -1.7
GRIN3BO60391 SNORA70.18-201ENST00000516696 98 ntBASIC4.44□□□□□ -1.7
GRIN3BO60391 AC025755.1-201ENST00000521306 278 ntBASIC4.44□□□□□ -1.7
GRIN3BO60391 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC4.44□□□□□ -1.7
GRIN3BO60391 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.44□□□□□ -1.7
GRIN3BO60391 TRAV28-201ENST00000557548 323 ntBASIC4.44□□□□□ -1.7
GRIN3BO60391 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC4.44□□□□□ -1.7
GRIN3BO60391 MIR3910-1-201ENST00000580936 111 ntBASIC4.44□□□□□ -1.7
GRIN3BO60391 MIR5188-201ENST00000583467 113 ntBASIC4.44□□□□□ -1.7
GRIN3BO60391 AC009314.1-201ENST00000603871 304 ntBASIC4.44□□□□□ -1.7
GRIN3BO60391 HNRNPDLP4-201ENST00000605144 301 ntBASIC4.44□□□□□ -1.7
GRIN3BO60391 AC004852.3-201ENST00000614131 326 ntBASIC4.44□□□□□ -1.7
GRIN3BO60391 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
GRIN3BO60391 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
GRIN3BO60391 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
GRIN3BO60391 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
GRIN3BO60391 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.44□□□□□ -1.7
GRIN3BO60391 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
GRIN3BO60391 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
GRIN3BO60391 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
GRIN3BO60391 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
GRIN3BO60391 MTND5P6-201ENST00000422338 1798 ntBASIC4.43□□□□□ -1.7
GRIN3BO60391 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
GRIN3BO60391 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.43□□□□□ -1.7
GRIN3BO60391 LINC01355-201ENST00000566551 5444 ntBASIC4.43□□□□□ -1.7
GRIN3BO60391 RNU6-770P-201ENST00000363929 105 ntBASIC4.43□□□□□ -1.7
GRIN3BO60391 MIR625-201ENST00000385047 85 ntBASIC4.43□□□□□ -1.7
GRIN3BO60391 MIR1261-201ENST00000408659 82 ntBASIC4.43□□□□□ -1.7
GRIN3BO60391 TOMM20P4-201ENST00000427861 435 ntBASIC4.43□□□□□ -1.7
GRIN3BO60391 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC4.43□□□□□ -1.7
GRIN3BO60391 CHEK2P4-201ENST00000450340 246 ntBASIC4.43□□□□□ -1.7
GRIN3BO60391 RPL23AP45-201ENST00000476406 468 ntBASIC4.43□□□□□ -1.7
GRIN3BO60391 HMGN2P13-201ENST00000476476 274 ntBASIC4.43□□□□□ -1.7
GRIN3BO60391 AC078817.1-201ENST00000492623 435 ntBASIC4.43□□□□□ -1.7
GRIN3BO60391 AC114801.2-201ENST00000503825 781 ntBASIC4.43□□□□□ -1.7
GRIN3BO60391 MTND1P19-201ENST00000511780 315 ntBASIC4.43□□□□□ -1.7
GRIN3BO60391 Y_RNA.715-201ENST00000517082 110 ntBASIC4.43□□□□□ -1.7
GRIN3BO60391 AC131281.1-201ENST00000522984 164 ntBASIC4.43□□□□□ -1.7
GRIN3BO60391 MIR5696-201ENST00000578474 85 ntBASIC4.43□□□□□ -1.7
GRIN3BO60391 AC015813.4-201ENST00000610469 179 ntBASIC4.43□□□□□ -1.7
GRIN3BO60391 MIR8076-201ENST00000611401 83 ntBASIC4.43□□□□□ -1.7
GRIN3BO60391 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
GRIN3BO60391 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
GRIN3BO60391 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
GRIN3BO60391 ZNF299P-201ENST00000406845 1804 ntBASIC4.42□□□□□ -1.7
GRIN3BO60391 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
GRIN3BO60391 Y_RNA.48-201ENST00000362710 103 ntBASIC4.42□□□□□ -1.7
GRIN3BO60391 Y_RNA.276-201ENST00000364732 109 ntBASIC4.42□□□□□ -1.7
GRIN3BO60391 RNU6-827P-201ENST00000365553 106 ntBASIC4.42□□□□□ -1.7
GRIN3BO60391 Y_RNA.489-201ENST00000384410 101 ntBASIC4.42□□□□□ -1.7
GRIN3BO60391 MIR10A-201ENST00000385043 110 ntBASIC4.42□□□□□ -1.7
GRIN3BO60391 SNORA48.8-201ENST00000391324 134 ntBASIC4.42□□□□□ -1.7
GRIN3BO60391 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.42□□□□□ -1.7
GRIN3BO60391 AC007919.1-201ENST00000429380 217 ntBASIC4.42□□□□□ -1.7
GRIN3BO60391 SNORA71B-202ENST00000439232 272 ntBASIC4.42□□□□□ -1.7
GRIN3BO60391 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.42□□□□□ -1.7
GRIN3BO60391 FO393415.2-201ENST00000480085 343 ntBASIC4.42□□□□□ -1.7
GRIN3BO60391 AC078918.1-201ENST00000498515 228 ntBASIC4.42□□□□□ -1.7
GRIN3BO60391 AC022080.3-201ENST00000544433 482 ntBASIC4.42□□□□□ -1.7
GRIN3BO60391 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.42□□□□□ -1.7
GRIN3BO60391 AL137100.2-201ENST00000555786 315 ntBASIC4.42□□□□□ -1.7
GRIN3BO60391 MIR5701-3-201ENST00000578890 82 ntBASIC4.42□□□□□ -1.7
GRIN3BO60391 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC4.42□□□□□ -1.7
GRIN3BO60391 MIR5701-1-201ENST00000585138 82 ntBASIC4.42□□□□□ -1.7
GRIN3BO60391 AL158827.2-201ENST00000602494 330 ntBASIC4.42□□□□□ -1.7
GRIN3BO60391 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.42□□□□□ -1.7
GRIN3BO60391 AC008121.1-201ENST00000603244 268 ntBASIC4.42□□□□□ -1.7
GRIN3BO60391 MIR5701-2-201ENST00000615634 82 ntBASIC4.42□□□□□ -1.7
GRIN3BO60391 AL591424.2-201ENST00000617023 128 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms