Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.31□□□□□ -2.36
SSSCA1O60232 TIMM9P1-201ENST00000436122 256 ntBASIC0.31□□□□□ -2.36
SSSCA1O60232 Z73417.1-201ENST00000447373 778 ntBASIC0.31□□□□□ -2.36
SSSCA1O60232 MTCYBP40-201ENST00000509390 1135 ntBASIC0.31□□□□□ -2.36
SSSCA1O60232 RNU6-991P-201ENST00000516168 107 ntBASIC0.31□□□□□ -2.36
SSSCA1O60232 RNU6-229P-201ENST00000516614 102 ntBASIC0.31□□□□□ -2.36
SSSCA1O60232 SNORA70.22-201ENST00000517160 124 ntBASIC0.31□□□□□ -2.36
SSSCA1O60232 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.31□□□□□ -2.36
SSSCA1O60232 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC0.31□□□□□ -2.36
SSSCA1O60232 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.31□□□□□ -2.36
SSSCA1O60232 AC018926.1-201ENST00000616335 435 ntBASIC0.31□□□□□ -2.36
SSSCA1O60232 AC022513.1-201ENST00000624512 117 ntBASIC0.31□□□□□ -2.36
SSSCA1O60232 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.31□□□□□ -2.36
SSSCA1O60232 AC233981.2-201ENST00000611524 1614 ntBASIC0.31□□□□□ -2.36
SSSCA1O60232 AC245060.5-201ENST00000610778 3293 ntBASIC0.3□□□□□ -2.36
SSSCA1O60232 AC023934.1-201ENST00000574529 2389 ntBASIC0.3□□□□□ -2.36
SSSCA1O60232 MIR96-201ENST00000362288 78 ntBASIC0.3□□□□□ -2.36
SSSCA1O60232 RNU6-1167P-201ENST00000363227 94 ntBASIC0.3□□□□□ -2.36
SSSCA1O60232 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.3□□□□□ -2.36
SSSCA1O60232 RNU6-637P-201ENST00000384050 107 ntBASIC0.3□□□□□ -2.36
SSSCA1O60232 AL356776.1-201ENST00000406574 447 ntBASIC0.3□□□□□ -2.36
SSSCA1O60232 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.3□□□□□ -2.36
SSSCA1O60232 RPS15AP12-201ENST00000419498 388 ntBASIC0.3□□□□□ -2.36
SSSCA1O60232 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.3□□□□□ -2.36
SSSCA1O60232 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.3□□□□□ -2.36
SSSCA1O60232 MTND4P6-201ENST00000438297 472 ntBASIC0.3□□□□□ -2.36
SSSCA1O60232 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.3□□□□□ -2.36
SSSCA1O60232 NDUFAF4P2-201ENST00000445374 520 ntBASIC0.3□□□□□ -2.36
SSSCA1O60232 MTND1P16-201ENST00000465177 898 ntBASIC0.3□□□□□ -2.36
SSSCA1O60232 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.3□□□□□ -2.36
SSSCA1O60232 RNA5SP135-201ENST00000517019 125 ntBASIC0.3□□□□□ -2.36
SSSCA1O60232 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.3□□□□□ -2.36
SSSCA1O60232 MIR3664-201ENST00000579074 99 ntBASIC0.3□□□□□ -2.36
SSSCA1O60232 VN1R82P-201ENST00000601481 356 ntBASIC0.3□□□□□ -2.36
SSSCA1O60232 AC105129.3-201ENST00000605455 485 ntBASIC0.3□□□□□ -2.36
SSSCA1O60232 AC104465.1-201ENST00000611365 139 ntBASIC0.3□□□□□ -2.36
SSSCA1O60232 MIR6134-201ENST00000617606 109 ntBASIC0.3□□□□□ -2.36
SSSCA1O60232 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.3□□□□□ -2.36
SSSCA1O60232 AC120349.3-201ENST00000624377 529 ntBASIC0.3□□□□□ -2.36
SSSCA1O60232 AC134026.1-201ENST00000623249 2239 ntBASIC0.29□□□□□ -2.36
SSSCA1O60232 SNORA27.3-201ENST00000364937 134 ntBASIC0.29□□□□□ -2.36
SSSCA1O60232 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.29□□□□□ -2.36
SSSCA1O60232 TMSB4XP8-201ENST00000402089 135 ntBASIC0.29□□□□□ -2.36
SSSCA1O60232 AP000275.1-201ENST00000411943 390 ntBASIC0.29□□□□□ -2.36
SSSCA1O60232 TMSB4XP6-201ENST00000415187 135 ntBASIC0.29□□□□□ -2.36
SSSCA1O60232 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.29□□□□□ -2.36
SSSCA1O60232 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC0.29□□□□□ -2.36
SSSCA1O60232 TMSB4XP1-201ENST00000424567 135 ntBASIC0.29□□□□□ -2.36
SSSCA1O60232 GPM6BP2-201ENST00000432046 144 ntBASIC0.29□□□□□ -2.36
SSSCA1O60232 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC0.29□□□□□ -2.36
SSSCA1O60232 GPM6BP1-201ENST00000446387 144 ntBASIC0.29□□□□□ -2.36
SSSCA1O60232 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.29□□□□□ -2.36
SSSCA1O60232 RNU4-57P-201ENST00000515980 135 ntBASIC0.29□□□□□ -2.36
SSSCA1O60232 RNU6-927P-201ENST00000516199 100 ntBASIC0.29□□□□□ -2.36
SSSCA1O60232 RNA5SP168-201ENST00000516642 112 ntBASIC0.29□□□□□ -2.36
SSSCA1O60232 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.29□□□□□ -2.36
SSSCA1O60232 AC087897.1-201ENST00000550134 156 ntBASIC0.29□□□□□ -2.36
SSSCA1O60232 HMGB1P33-201ENST00000563485 527 ntBASIC0.29□□□□□ -2.36
SSSCA1O60232 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.29□□□□□ -2.36
SSSCA1O60232 MIR4714-201ENST00000580728 77 ntBASIC0.29□□□□□ -2.36
SSSCA1O60232 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC0.29□□□□□ -2.36
SSSCA1O60232 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.29□□□□□ -2.36
SSSCA1O60232 AL161798.1-201ENST00000604630 131 ntBASIC0.29□□□□□ -2.36
SSSCA1O60232 AL133445.2-201ENST00000611191 527 ntBASIC0.29□□□□□ -2.36
SSSCA1O60232 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.29□□□□□ -2.36
SSSCA1O60232 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
SSSCA1O60232 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.28□□□□□ -2.36
SSSCA1O60232 MIR186-201ENST00000384988 86 ntBASIC0.28□□□□□ -2.36
SSSCA1O60232 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
SSSCA1O60232 DHFRP6-201ENST00000401776 268 ntBASIC0.28□□□□□ -2.36
SSSCA1O60232 AC138623.1-201ENST00000418060 216 ntBASIC0.28□□□□□ -2.36
SSSCA1O60232 MTCO3P1-205ENST00000422088 832 ntBASIC0.28□□□□□ -2.36
SSSCA1O60232 USP9YP22-201ENST00000438971 294 ntBASIC0.28□□□□□ -2.36
SSSCA1O60232 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.28□□□□□ -2.36
SSSCA1O60232 AL078601.1-201ENST00000444542 271 ntBASIC0.28□□□□□ -2.36
SSSCA1O60232 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC0.28□□□□□ -2.36
SSSCA1O60232 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.28□□□□□ -2.36
SSSCA1O60232 TRMT112P2-201ENST00000512910 132 ntBASIC0.28□□□□□ -2.36
SSSCA1O60232 MTND5P13-201ENST00000513046 1079 ntBASIC0.28□□□□□ -2.36
SSSCA1O60232 RNA5SP458-201ENST00000516188 119 ntBASIC0.28□□□□□ -2.36
SSSCA1O60232 AP000889.1-201ENST00000530968 660 ntBASIC0.28□□□□□ -2.36
SSSCA1O60232 AL356057.1-201ENST00000533798 831 ntBASIC0.28□□□□□ -2.36
SSSCA1O60232 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.28□□□□□ -2.36
SSSCA1O60232 MIR4524B-201ENST00000581569 115 ntBASIC0.28□□□□□ -2.36
SSSCA1O60232 AC022432.1-201ENST00000595739 310 ntBASIC0.28□□□□□ -2.36
SSSCA1O60232 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC0.28□□□□□ -2.36
SSSCA1O60232 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.28□□□□□ -2.36
SSSCA1O60232 U6.99-201ENST00000637524 83 ntBASIC0.28□□□□□ -2.36
SSSCA1O60232 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
SSSCA1O60232 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.37
SSSCA1O60232 FARSBP1-201ENST00000435808 1778 ntBASIC0.27□□□□□ -2.37
SSSCA1O60232 U3.8-201ENST00000363675 217 ntBASIC0.27□□□□□ -2.37
SSSCA1O60232 SNORD114-6-201ENST00000364393 72 ntBASIC0.27□□□□□ -2.37
SSSCA1O60232 RNU4-12P-201ENST00000365233 139 ntBASIC0.27□□□□□ -2.37
SSSCA1O60232 AL031577.2-201ENST00000404133 280 ntBASIC0.27□□□□□ -2.37
SSSCA1O60232 TAF13P2-201ENST00000416876 286 ntBASIC0.27□□□□□ -2.37
SSSCA1O60232 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.27□□□□□ -2.37
SSSCA1O60232 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC0.27□□□□□ -2.37
SSSCA1O60232 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.27□□□□□ -2.37
SSSCA1O60232 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms