Protein–RNA interactions for Protein: O43818

RRP9, U3 small nucleolar RNA-interacting protein 2, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9O43818 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.31□□□□□ -1.88
RRP9O43818 HMGN1P13-201ENST00000505795 138 ntBASIC3.31□□□□□ -1.88
RRP9O43818 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.31□□□□□ -1.88
RRP9O43818 RNA5SP367-201ENST00000516557 118 ntBASIC3.31□□□□□ -1.88
RRP9O43818 Y_RNA.687-201ENST00000516558 91 ntBASIC3.31□□□□□ -1.88
RRP9O43818 RNA5SP402-201ENST00000517148 110 ntBASIC3.31□□□□□ -1.88
RRP9O43818 HPRT1P3-201ENST00000539521 576 ntBASIC3.31□□□□□ -1.88
RRP9O43818 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.31□□□□□ -1.88
RRP9O43818 NACAP3-201ENST00000552100 481 ntBASIC3.31□□□□□ -1.88
RRP9O43818 AC136624.4-201ENST00000573044 370 ntBASIC3.31□□□□□ -1.88
RRP9O43818 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.31□□□□□ -1.88
RRP9O43818 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RRP9O43818 AL050343.2-201ENST00000607338 280 ntBASIC3.31□□□□□ -1.88
RRP9O43818 AC069200.1-201ENST00000609511 323 ntBASIC3.31□□□□□ -1.88
RRP9O43818 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.31□□□□□ -1.88
RRP9O43818 AL442067.2-201ENST00000614033 363 ntBASIC3.31□□□□□ -1.88
RRP9O43818 AL161629.2-201ENST00000615347 275 ntBASIC3.31□□□□□ -1.88
RRP9O43818 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.31□□□□□ -1.88
RRP9O43818 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RRP9O43818 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RRP9O43818 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.31□□□□□ -1.88
RRP9O43818 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RRP9O43818 Y_RNA.431-201ENST00000384086 102 ntBASIC3.3□□□□□ -1.88
RRP9O43818 Y_RNA.482-201ENST00000384377 111 ntBASIC3.3□□□□□ -1.88
RRP9O43818 RNU6-601P-201ENST00000384540 107 ntBASIC3.3□□□□□ -1.88
RRP9O43818 U3.37-201ENST00000408528 213 ntBASIC3.3□□□□□ -1.88
RRP9O43818 RNU4-14P-201ENST00000410858 122 ntBASIC3.3□□□□□ -1.88
RRP9O43818 SNORD56-201ENST00000413522 71 ntBASIC3.3□□□□□ -1.88
RRP9O43818 AC016831.2-201ENST00000417179 352 ntBASIC3.3□□□□□ -1.88
RRP9O43818 MTCO2P27-201ENST00000420740 428 ntBASIC3.3□□□□□ -1.88
RRP9O43818 AL031274.1-201ENST00000450334 232 ntBASIC3.3□□□□□ -1.88
RRP9O43818 AC010099.1-201ENST00000455434 375 ntBASIC3.3□□□□□ -1.88
RRP9O43818 SNORD19B-201ENST00000459623 84 ntBASIC3.3□□□□□ -1.88
RRP9O43818 RPL23AP45-201ENST00000476406 468 ntBASIC3.3□□□□□ -1.88
RRP9O43818 RPS29P20-201ENST00000489592 171 ntBASIC3.3□□□□□ -1.88
RRP9O43818 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.3□□□□□ -1.88
RRP9O43818 RNU6-1016P-201ENST00000516689 94 ntBASIC3.3□□□□□ -1.88
RRP9O43818 RNU1-54P-201ENST00000517181 120 ntBASIC3.3□□□□□ -1.88
RRP9O43818 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.3□□□□□ -1.88
RRP9O43818 MIR5194-201ENST00000582634 120 ntBASIC3.3□□□□□ -1.88
RRP9O43818 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.3□□□□□ -1.88
RRP9O43818 AC020895.1-201ENST00000595362 272 ntBASIC3.3□□□□□ -1.88
RRP9O43818 AC064836.2-201ENST00000609491 462 ntBASIC3.3□□□□□ -1.88
RRP9O43818 AC135507.2-201ENST00000612443 309 ntBASIC3.3□□□□□ -1.88
RRP9O43818 MIR6128-201ENST00000615528 109 ntBASIC3.3□□□□□ -1.88
RRP9O43818 AL359757.2-201ENST00000624309 274 ntBASIC3.3□□□□□ -1.88
RRP9O43818 GABRG2-229ENST00000641017 3628 ntBASIC3.3□□□□□ -1.88
RRP9O43818 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.3□□□□□ -1.88
RRP9O43818 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.3□□□□□ -1.88
RRP9O43818 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
RRP9O43818 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.29□□□□□ -1.88
RRP9O43818 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.29□□□□□ -1.88
RRP9O43818 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
RRP9O43818 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
RRP9O43818 SNORD62.1-201ENST00000362541 86 ntBASIC3.29□□□□□ -1.88
RRP9O43818 RNU5E-7P-201ENST00000365290 117 ntBASIC3.29□□□□□ -1.88
RRP9O43818 RNU6-898P-201ENST00000365627 104 ntBASIC3.29□□□□□ -1.88
RRP9O43818 MIR518D-201ENST00000385014 87 ntBASIC3.29□□□□□ -1.88
RRP9O43818 RNA5SP181-201ENST00000410246 98 ntBASIC3.29□□□□□ -1.88
RRP9O43818 RNU6-370P-201ENST00000411008 104 ntBASIC3.29□□□□□ -1.88
RRP9O43818 MTND1P14-201ENST00000427400 950 ntBASIC3.29□□□□□ -1.88
RRP9O43818 AC098831.1-201ENST00000440661 216 ntBASIC3.29□□□□□ -1.88
RRP9O43818 snoU109.2-201ENST00000459316 135 ntBASIC3.29□□□□□ -1.88
RRP9O43818 AC116337.1-201ENST00000509680 687 ntBASIC3.29□□□□□ -1.88
RRP9O43818 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.29□□□□□ -1.88
RRP9O43818 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RRP9O43818 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.29□□□□□ -1.88
RRP9O43818 AC109479.2-201ENST00000517842 174 ntBASIC3.29□□□□□ -1.88
RRP9O43818 AP004607.1-201ENST00000524456 203 ntBASIC3.29□□□□□ -1.88
RRP9O43818 AP002404.1-201ENST00000532005 451 ntBASIC3.29□□□□□ -1.88
RRP9O43818 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.29□□□□□ -1.88
RRP9O43818 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RRP9O43818 RNU4-89P-201ENST00000607443 133 ntBASIC3.29□□□□□ -1.88
RRP9O43818 MIR6134-201ENST00000617606 109 ntBASIC3.29□□□□□ -1.88
RRP9O43818 AL160413.1-201ENST00000622780 310 ntBASIC3.29□□□□□ -1.88
RRP9O43818 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RRP9O43818 AC099654.7-201ENST00000635788 2127 ntBASIC3.29□□□□□ -1.88
RRP9O43818 AC110491.1-201ENST00000562191 2010 ntBASIC3.29□□□□□ -1.88
RRP9O43818 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.28□□□□□ -1.88
RRP9O43818 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RRP9O43818 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
RRP9O43818 Y_RNA.259-201ENST00000364619 101 ntBASIC3.28□□□□□ -1.88
RRP9O43818 RNU6-198P-201ENST00000384258 104 ntBASIC3.28□□□□□ -1.88
RRP9O43818 BPY2DP-201ENST00000422208 265 ntBASIC3.28□□□□□ -1.88
RRP9O43818 HIGD1AP2-201ENST00000446367 280 ntBASIC3.28□□□□□ -1.88
RRP9O43818 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.28□□□□□ -1.88
RRP9O43818 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.28□□□□□ -1.88
RRP9O43818 AC006026.2-201ENST00000457376 180 ntBASIC3.28□□□□□ -1.88
RRP9O43818 AC113155.1-201ENST00000511141 769 ntBASIC3.28□□□□□ -1.88
RRP9O43818 RNA5SP82-201ENST00000516707 92 ntBASIC3.28□□□□□ -1.88
RRP9O43818 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RRP9O43818 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.28□□□□□ -1.88
RRP9O43818 AC009163.5-201ENST00000575421 637 ntBASIC3.28□□□□□ -1.88
RRP9O43818 AL356055.1-201ENST00000602528 446 ntBASIC3.28□□□□□ -1.88
RRP9O43818 AL160281.1-201ENST00000605307 311 ntBASIC3.28□□□□□ -1.88
RRP9O43818 AL121917.1-203ENST00000605534 577 ntBASIC3.28□□□□□ -1.88
RRP9O43818 MIR6798-201ENST00000612887 67 ntBASIC3.28□□□□□ -1.88
RRP9O43818 AC126177.8-201ENST00000618339 1015 ntBASIC3.28□□□□□ -1.88
RRP9O43818 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
RRP9O43818 AC010680.1-201ENST00000590024 3590 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms