Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 RN7SKP220-201ENST00000410611 288 ntBASIC3.13□□□□□ -1.91
SMAD6O43541 RPLP0P7-201ENST00000416050 667 ntBASIC3.13□□□□□ -1.91
SMAD6O43541 AL590632.1-201ENST00000424289 371 ntBASIC3.13□□□□□ -1.91
SMAD6O43541 MTCYBP10-201ENST00000424905 650 ntBASIC3.13□□□□□ -1.91
SMAD6O43541 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.13□□□□□ -1.91
SMAD6O43541 SNAP23P1-201ENST00000433229 246 ntBASIC3.13□□□□□ -1.91
SMAD6O43541 BTF3P15-201ENST00000455606 336 ntBASIC3.13□□□□□ -1.91
SMAD6O43541 RPS29P12-201ENST00000460178 152 ntBASIC3.13□□□□□ -1.91
SMAD6O43541 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.13□□□□□ -1.91
SMAD6O43541 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.13□□□□□ -1.91
SMAD6O43541 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.13□□□□□ -1.91
SMAD6O43541 MTCO2P24-201ENST00000515611 426 ntBASIC3.13□□□□□ -1.91
SMAD6O43541 SNORA14.1-201ENST00000516113 141 ntBASIC3.13□□□□□ -1.91
SMAD6O43541 SNORA64.4-201ENST00000516632 81 ntBASIC3.13□□□□□ -1.91
SMAD6O43541 AC103783.1-201ENST00000520506 373 ntBASIC3.13□□□□□ -1.91
SMAD6O43541 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.13□□□□□ -1.91
SMAD6O43541 MIR3668-201ENST00000582138 75 ntBASIC3.13□□□□□ -1.91
SMAD6O43541 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.13□□□□□ -1.91
SMAD6O43541 AC073539.2-201ENST00000597113 165 ntBASIC3.13□□□□□ -1.91
SMAD6O43541 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.13□□□□□ -1.91
SMAD6O43541 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.13□□□□□ -1.91
SMAD6O43541 7SK.7-201ENST00000603504 247 ntBASIC3.13□□□□□ -1.91
SMAD6O43541 AC090425.1-201ENST00000610007 140 ntBASIC3.13□□□□□ -1.91
SMAD6O43541 AC092608.2-201ENST00000624427 218 ntBASIC3.13□□□□□ -1.91
SMAD6O43541 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.13□□□□□ -1.91
SMAD6O43541 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.13□□□□□ -1.91
SMAD6O43541 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
SMAD6O43541 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.12□□□□□ -1.91
SMAD6O43541 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SMAD6O43541 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SMAD6O43541 SNORD56.3-201ENST00000363507 71 ntBASIC3.12□□□□□ -1.91
SMAD6O43541 RNU6-525P-201ENST00000363685 104 ntBASIC3.12□□□□□ -1.91
SMAD6O43541 RNU6-593P-201ENST00000364716 112 ntBASIC3.12□□□□□ -1.91
SMAD6O43541 RNU6-715P-201ENST00000365204 103 ntBASIC3.12□□□□□ -1.91
SMAD6O43541 Y_RNA.399-201ENST00000383955 105 ntBASIC3.12□□□□□ -1.91
SMAD6O43541 Y_RNA.452-201ENST00000384202 108 ntBASIC3.12□□□□□ -1.91
SMAD6O43541 Y_RNA.463-201ENST00000384271 102 ntBASIC3.12□□□□□ -1.91
SMAD6O43541 MIR135A2-201ENST00000384854 100 ntBASIC3.12□□□□□ -1.91
SMAD6O43541 RNA5SP111-201ENST00000411386 101 ntBASIC3.12□□□□□ -1.91
SMAD6O43541 RPL7P10-201ENST00000417407 739 ntBASIC3.12□□□□□ -1.91
SMAD6O43541 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.12□□□□□ -1.91
SMAD6O43541 RPL7P37-201ENST00000425095 738 ntBASIC3.12□□□□□ -1.91
SMAD6O43541 AC091390.3-201ENST00000426478 338 ntBASIC3.12□□□□□ -1.91
SMAD6O43541 AL669831.1-202ENST00000428504 417 ntBASIC3.12□□□□□ -1.91
SMAD6O43541 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.12□□□□□ -1.91
SMAD6O43541 RPL23AP58-201ENST00000440453 469 ntBASIC3.12□□□□□ -1.91
SMAD6O43541 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.12□□□□□ -1.91
SMAD6O43541 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.12□□□□□ -1.91
SMAD6O43541 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.12□□□□□ -1.91
SMAD6O43541 RPL12P25-201ENST00000455592 494 ntBASIC3.12□□□□□ -1.91
SMAD6O43541 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.12□□□□□ -1.91
SMAD6O43541 RNU7-167P-201ENST00000459160 62 ntBASIC3.12□□□□□ -1.91
SMAD6O43541 AC087884.1-201ENST00000469738 328 ntBASIC3.12□□□□□ -1.91
SMAD6O43541 AC117503.1-201ENST00000472241 394 ntBASIC3.12□□□□□ -1.91
SMAD6O43541 AC108860.1-201ENST00000484521 383 ntBASIC3.12□□□□□ -1.91
SMAD6O43541 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.12□□□□□ -1.91
SMAD6O43541 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SMAD6O43541 AC116337.1-201ENST00000509680 687 ntBASIC3.12□□□□□ -1.91
SMAD6O43541 AC026801.2-201ENST00000515352 425 ntBASIC3.12□□□□□ -1.91
SMAD6O43541 RNU2-69P-201ENST00000516061 100 ntBASIC3.12□□□□□ -1.91
SMAD6O43541 RNU6-1069P-201ENST00000516612 133 ntBASIC3.12□□□□□ -1.91
SMAD6O43541 RNU6-1332P-201ENST00000516666 104 ntBASIC3.12□□□□□ -1.91
SMAD6O43541 AC009812.2-201ENST00000517657 457 ntBASIC3.12□□□□□ -1.91
SMAD6O43541 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.12□□□□□ -1.91
SMAD6O43541 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.12□□□□□ -1.91
SMAD6O43541 AC008269.2-201ENST00000561915 1105 ntBASIC3.12□□□□□ -1.91
SMAD6O43541 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.12□□□□□ -1.91
SMAD6O43541 AC010653.1-201ENST00000571108 881 ntBASIC3.12□□□□□ -1.91
SMAD6O43541 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.12□□□□□ -1.91
SMAD6O43541 MIR3941-201ENST00000582572 103 ntBASIC3.12□□□□□ -1.91
SMAD6O43541 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.12□□□□□ -1.91
SMAD6O43541 AC012669.1-201ENST00000603209 283 ntBASIC3.12□□□□□ -1.91
SMAD6O43541 AC009229.3-201ENST00000608056 282 ntBASIC3.12□□□□□ -1.91
SMAD6O43541 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.12□□□□□ -1.91
SMAD6O43541 AL591516.1-201ENST00000611326 274 ntBASIC3.12□□□□□ -1.91
SMAD6O43541 AC022418.1-201ENST00000624118 445 ntBASIC3.12□□□□□ -1.91
SMAD6O43541 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.12□□□□□ -1.91
SMAD6O43541 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.12□□□□□ -1.91
SMAD6O43541 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SMAD6O43541 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
SMAD6O43541 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.12□□□□□ -1.91
SMAD6O43541 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.12□□□□□ -1.91
SMAD6O43541 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.11□□□□□ -1.91
SMAD6O43541 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SMAD6O43541 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
SMAD6O43541 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.11□□□□□ -1.91
SMAD6O43541 AL137003.2-201ENST00000606924 2538 ntBASIC3.11□□□□□ -1.91
SMAD6O43541 MTND5P7-201ENST00000413558 1798 ntBASIC3.11□□□□□ -1.91
SMAD6O43541 MIR22-201ENST00000362190 85 ntBASIC3.11□□□□□ -1.91
SMAD6O43541 SNORD3E-201ENST00000362899 217 ntBASIC3.11□□□□□ -1.91
SMAD6O43541 Y_RNA.193-201ENST00000363979 102 ntBASIC3.11□□□□□ -1.91
SMAD6O43541 Y_RNA.404-201ENST00000383978 102 ntBASIC3.11□□□□□ -1.91
SMAD6O43541 Y_RNA.527-201ENST00000384573 102 ntBASIC3.11□□□□□ -1.91
SMAD6O43541 AL139039.1-201ENST00000401900 692 ntBASIC3.11□□□□□ -1.91
SMAD6O43541 AL138885.1-201ENST00000405921 675 ntBASIC3.11□□□□□ -1.91
SMAD6O43541 AL031121.1-201ENST00000406553 254 ntBASIC3.11□□□□□ -1.91
SMAD6O43541 AC092809.3-201ENST00000415453 231 ntBASIC3.11□□□□□ -1.91
SMAD6O43541 RPS12P18-201ENST00000442381 270 ntBASIC3.11□□□□□ -1.91
SMAD6O43541 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.11□□□□□ -1.91
SMAD6O43541 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms