Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.11□□□□□ -1.91
MSI1O43347 RNU6-703P-201ENST00000516946 107 ntBASIC3.11□□□□□ -1.91
MSI1O43347 AP005597.4-201ENST00000526762 229 ntBASIC3.11□□□□□ -1.91
MSI1O43347 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
MSI1O43347 GLYCAM1-201ENST00000546596 285 ntBASIC3.11□□□□□ -1.91
MSI1O43347 AC025423.5-201ENST00000550230 219 ntBASIC3.11□□□□□ -1.91
MSI1O43347 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.11□□□□□ -1.91
MSI1O43347 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
MSI1O43347 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
MSI1O43347 AC006026.1-201ENST00000444025 1803 ntBASIC3.11□□□□□ -1.91
MSI1O43347 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.11□□□□□ -1.91
MSI1O43347 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
MSI1O43347 MTND5P19-201ENST00000424872 1794 ntBASIC3.1□□□□□ -1.91
MSI1O43347 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
MSI1O43347 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
MSI1O43347 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
MSI1O43347 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.1□□□□□ -1.91
MSI1O43347 Y_RNA.11-201ENST00000362375 109 ntBASIC3.1□□□□□ -1.91
MSI1O43347 Z98749.2-208ENST00000381646 500 ntBASIC3.1□□□□□ -1.91
MSI1O43347 SNORA1.3-201ENST00000384676 136 ntBASIC3.1□□□□□ -1.91
MSI1O43347 UBA52P6-201ENST00000399822 382 ntBASIC3.1□□□□□ -1.91
MSI1O43347 RPL5P18-201ENST00000406671 891 ntBASIC3.1□□□□□ -1.91
MSI1O43347 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.1□□□□□ -1.91
MSI1O43347 AC245054.2-201ENST00000415639 319 ntBASIC3.1□□□□□ -1.91
MSI1O43347 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.1□□□□□ -1.91
MSI1O43347 AL590632.1-201ENST00000424289 371 ntBASIC3.1□□□□□ -1.91
MSI1O43347 MTND4P28-201ENST00000426217 387 ntBASIC3.1□□□□□ -1.91
MSI1O43347 AC022018.1-201ENST00000430685 241 ntBASIC3.1□□□□□ -1.91
MSI1O43347 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.1□□□□□ -1.91
MSI1O43347 RNU7-138P-201ENST00000459479 64 ntBASIC3.1□□□□□ -1.91
MSI1O43347 AC087854.1-201ENST00000519706 414 ntBASIC3.1□□□□□ -1.91
MSI1O43347 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.1□□□□□ -1.91
MSI1O43347 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.1□□□□□ -1.91
MSI1O43347 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.1□□□□□ -1.91
MSI1O43347 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.1□□□□□ -1.91
MSI1O43347 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.1□□□□□ -1.91
MSI1O43347 MIR4790-201ENST00000577799 79 ntBASIC3.1□□□□□ -1.91
MSI1O43347 AC138761.3-201ENST00000579993 334 ntBASIC3.1□□□□□ -1.91
MSI1O43347 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.1□□□□□ -1.91
MSI1O43347 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.1□□□□□ -1.91
MSI1O43347 NUTF2P8-201ENST00000604593 363 ntBASIC3.1□□□□□ -1.91
MSI1O43347 AL137843.1-201ENST00000605078 385 ntBASIC3.1□□□□□ -1.91
MSI1O43347 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.1□□□□□ -1.91
MSI1O43347 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.1□□□□□ -1.91
MSI1O43347 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
MSI1O43347 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
MSI1O43347 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
MSI1O43347 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.1□□□□□ -1.91
MSI1O43347 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
MSI1O43347 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.09□□□□□ -1.91
MSI1O43347 FAM35BP-202ENST00000497389 3337 ntBASIC3.09□□□□□ -1.91
MSI1O43347 Y_RNA.67-201ENST00000362870 100 ntBASIC3.09□□□□□ -1.91
MSI1O43347 RNU6-884P-201ENST00000363889 107 ntBASIC3.09□□□□□ -1.91
MSI1O43347 MIR10A-201ENST00000385043 110 ntBASIC3.09□□□□□ -1.91
MSI1O43347 RN7SKP158-201ENST00000410453 326 ntBASIC3.09□□□□□ -1.91
MSI1O43347 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.09□□□□□ -1.91
MSI1O43347 AC099548.1-201ENST00000421443 426 ntBASIC3.09□□□□□ -1.91
MSI1O43347 PGBD4P6-201ENST00000421501 610 ntBASIC3.09□□□□□ -1.91
MSI1O43347 AL627311.1-201ENST00000431514 115 ntBASIC3.09□□□□□ -1.91
MSI1O43347 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.09□□□□□ -1.91
MSI1O43347 AL359672.1-201ENST00000442302 409 ntBASIC3.09□□□□□ -1.91
MSI1O43347 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.09□□□□□ -1.91
MSI1O43347 AL078601.1-201ENST00000444542 271 ntBASIC3.09□□□□□ -1.91
MSI1O43347 SSXP4-201ENST00000451349 245 ntBASIC3.09□□□□□ -1.91
MSI1O43347 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.09□□□□□ -1.91
MSI1O43347 AC069113.1-201ENST00000517763 267 ntBASIC3.09□□□□□ -1.91
MSI1O43347 CYCSP39-201ENST00000565821 309 ntBASIC3.09□□□□□ -1.91
MSI1O43347 AC008962.1-201ENST00000605729 304 ntBASIC3.09□□□□□ -1.91
MSI1O43347 RNU6-85P-201ENST00000605989 107 ntBASIC3.09□□□□□ -1.91
MSI1O43347 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.09□□□□□ -1.91
MSI1O43347 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.09□□□□□ -1.91
MSI1O43347 AC000403.1-201ENST00000613696 3585 ntBASIC3.09□□□□□ -1.92
MSI1O43347 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
MSI1O43347 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
MSI1O43347 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.08□□□□□ -1.92
MSI1O43347 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.08□□□□□ -1.92
MSI1O43347 RNU6-562P-201ENST00000362731 107 ntBASIC3.08□□□□□ -1.92
MSI1O43347 SNORA51.4-201ENST00000364993 124 ntBASIC3.08□□□□□ -1.92
MSI1O43347 RNU6-128P-201ENST00000383976 107 ntBASIC3.08□□□□□ -1.92
MSI1O43347 RNU6-301P-201ENST00000384277 107 ntBASIC3.08□□□□□ -1.92
MSI1O43347 SNORA46-201ENST00000384762 135 ntBASIC3.08□□□□□ -1.92
MSI1O43347 SNORD73A-201ENST00000386062 65 ntBASIC3.08□□□□□ -1.92
MSI1O43347 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.08□□□□□ -1.92
MSI1O43347 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.08□□□□□ -1.92
MSI1O43347 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.08□□□□□ -1.92
MSI1O43347 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.08□□□□□ -1.92
MSI1O43347 AL590664.1-201ENST00000448065 339 ntBASIC3.08□□□□□ -1.92
MSI1O43347 AC092436.3-201ENST00000511788 257 ntBASIC3.08□□□□□ -1.92
MSI1O43347 RNU6-1183P-201ENST00000517054 60 ntBASIC3.08□□□□□ -1.92
MSI1O43347 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.08□□□□□ -1.92
MSI1O43347 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.08□□□□□ -1.92
MSI1O43347 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.08□□□□□ -1.92
MSI1O43347 MIR3609-201ENST00000582661 80 ntBASIC3.08□□□□□ -1.92
MSI1O43347 ELOCP5-201ENST00000604924 333 ntBASIC3.08□□□□□ -1.92
MSI1O43347 AC113139.1-201ENST00000605049 239 ntBASIC3.08□□□□□ -1.92
MSI1O43347 AC016727.1-205ENST00000605437 569 ntBASIC3.08□□□□□ -1.92
MSI1O43347 AL050343.2-201ENST00000607338 280 ntBASIC3.08□□□□□ -1.92
MSI1O43347 AC002076.2-201ENST00000617362 122 ntBASIC3.08□□□□□ -1.92
MSI1O43347 MIR6076-201ENST00000617521 113 ntBASIC3.08□□□□□ -1.92
MSI1O43347 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms