Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.35□□□□□ -2.03
PHF1O43189 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.35□□□□□ -2.03
PHF1O43189 AC103975.1-201ENST00000482506 483 ntBASIC2.35□□□□□ -2.03
PHF1O43189 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.35□□□□□ -2.03
PHF1O43189 LRRC34P2-201ENST00000514850 553 ntBASIC2.35□□□□□ -2.03
PHF1O43189 SNORA20.3-201ENST00000516880 132 ntBASIC2.35□□□□□ -2.03
PHF1O43189 RN7SKP40-201ENST00000517211 242 ntBASIC2.35□□□□□ -2.03
PHF1O43189 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.35□□□□□ -2.03
PHF1O43189 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.35□□□□□ -2.03
PHF1O43189 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.35□□□□□ -2.03
PHF1O43189 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.35□□□□□ -2.03
PHF1O43189 AL118558.2-201ENST00000556294 238 ntBASIC2.35□□□□□ -2.03
PHF1O43189 MIR1273C-201ENST00000578669 77 ntBASIC2.35□□□□□ -2.03
PHF1O43189 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.35□□□□□ -2.03
PHF1O43189 MIR3605-201ENST00000583214 100 ntBASIC2.35□□□□□ -2.03
PHF1O43189 FTX_3.1-201ENST00000610451 147 ntBASIC2.35□□□□□ -2.03
PHF1O43189 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
PHF1O43189 uc_338.34-201ENST00000617467 174 ntBASIC2.35□□□□□ -2.03
PHF1O43189 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.35□□□□□ -2.03
PHF1O43189 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.35□□□□□ -2.03
PHF1O43189 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
PHF1O43189 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
PHF1O43189 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.34□□□□□ -2.03
PHF1O43189 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
PHF1O43189 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
PHF1O43189 RNU6-859P-201ENST00000362728 107 ntBASIC2.34□□□□□ -2.03
PHF1O43189 RNU6-116P-201ENST00000384042 109 ntBASIC2.34□□□□□ -2.03
PHF1O43189 MIR627-201ENST00000384979 97 ntBASIC2.34□□□□□ -2.03
PHF1O43189 MIR325-201ENST00000385260 98 ntBASIC2.34□□□□□ -2.03
PHF1O43189 MIR301A-201ENST00000385261 86 ntBASIC2.34□□□□□ -2.03
PHF1O43189 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
PHF1O43189 AL360182.1-201ENST00000397433 468 ntBASIC2.34□□□□□ -2.03
PHF1O43189 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.34□□□□□ -2.03
PHF1O43189 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.34□□□□□ -2.03
PHF1O43189 BTF3L4P3-201ENST00000418879 476 ntBASIC2.34□□□□□ -2.03
PHF1O43189 ZNF863P-201ENST00000426746 417 ntBASIC2.34□□□□□ -2.03
PHF1O43189 GPM6BP2-201ENST00000432046 144 ntBASIC2.34□□□□□ -2.03
PHF1O43189 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.34□□□□□ -2.03
PHF1O43189 ERLEC1P1-201ENST00000433806 578 ntBASIC2.34□□□□□ -2.03
PHF1O43189 AC092573.2-201ENST00000434546 243 ntBASIC2.34□□□□□ -2.03
PHF1O43189 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.34□□□□□ -2.03
PHF1O43189 GPM6BP1-201ENST00000446387 144 ntBASIC2.34□□□□□ -2.03
PHF1O43189 MRPL50P4-201ENST00000446432 475 ntBASIC2.34□□□□□ -2.03
PHF1O43189 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.34□□□□□ -2.03
PHF1O43189 snoU13.23-201ENST00000458863 104 ntBASIC2.34□□□□□ -2.03
PHF1O43189 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.34□□□□□ -2.03
PHF1O43189 AC022493.1-201ENST00000492984 337 ntBASIC2.34□□□□□ -2.03
PHF1O43189 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.34□□□□□ -2.03
PHF1O43189 MTCO2P30-201ENST00000503662 364 ntBASIC2.34□□□□□ -2.03
PHF1O43189 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.34□□□□□ -2.03
PHF1O43189 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
PHF1O43189 AC104136.1-201ENST00000512969 394 ntBASIC2.34□□□□□ -2.03
PHF1O43189 RNU6-703P-201ENST00000516946 107 ntBASIC2.34□□□□□ -2.03
PHF1O43189 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.34□□□□□ -2.03
PHF1O43189 AC009902.1-201ENST00000519351 183 ntBASIC2.34□□□□□ -2.03
PHF1O43189 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.34□□□□□ -2.03
PHF1O43189 OR11H5P-201ENST00000554039 926 ntBASIC2.34□□□□□ -2.03
PHF1O43189 AL157871.3-201ENST00000557231 293 ntBASIC2.34□□□□□ -2.03
PHF1O43189 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
PHF1O43189 AC005046.1-201ENST00000608515 625 ntBASIC2.34□□□□□ -2.03
PHF1O43189 DUSP12P1-201ENST00000612874 516 ntBASIC2.34□□□□□ -2.03
PHF1O43189 AL161629.2-201ENST00000615347 275 ntBASIC2.34□□□□□ -2.03
PHF1O43189 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.34□□□□□ -2.03
PHF1O43189 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.34□□□□□ -2.03
PHF1O43189 AP003400.5-201ENST00000624827 617 ntBASIC2.34□□□□□ -2.03
PHF1O43189 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.34□□□□□ -2.03
PHF1O43189 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.04
PHF1O43189 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
PHF1O43189 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.34□□□□□ -2.04
PHF1O43189 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
PHF1O43189 AC096644.4-201ENST00000563417 2912 ntBASIC2.34□□□□□ -2.04
PHF1O43189 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.34□□□□□ -2.04
PHF1O43189 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.33□□□□□ -2.04
PHF1O43189 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
PHF1O43189 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.33□□□□□ -2.04
PHF1O43189 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
PHF1O43189 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.33□□□□□ -2.04
PHF1O43189 Y_RNA.279-201ENST00000364763 95 ntBASIC2.33□□□□□ -2.04
PHF1O43189 RNU6-715P-201ENST00000365204 103 ntBASIC2.33□□□□□ -2.04
PHF1O43189 RNU6-198P-201ENST00000384258 104 ntBASIC2.33□□□□□ -2.04
PHF1O43189 RNU6-1035P-201ENST00000384477 107 ntBASIC2.33□□□□□ -2.04
PHF1O43189 MIR578-201ENST00000384828 96 ntBASIC2.33□□□□□ -2.04
PHF1O43189 MT-TL1-201ENST00000386347 75 ntBASIC2.33□□□□□ -2.04
PHF1O43189 AL606923.1-201ENST00000406616 190 ntBASIC2.33□□□□□ -2.04
PHF1O43189 AC138393.2-201ENST00000414742 246 ntBASIC2.33□□□□□ -2.04
PHF1O43189 ARL5AP1-201ENST00000418991 388 ntBASIC2.33□□□□□ -2.04
PHF1O43189 MTND4LP11-201ENST00000422184 280 ntBASIC2.33□□□□□ -2.04
PHF1O43189 BX276092.3-201ENST00000424182 230 ntBASIC2.33□□□□□ -2.04
PHF1O43189 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.33□□□□□ -2.04
PHF1O43189 SNRPEP9-201ENST00000436794 238 ntBASIC2.33□□□□□ -2.04
PHF1O43189 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.33□□□□□ -2.04
PHF1O43189 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.33□□□□□ -2.04
PHF1O43189 CECR9-201ENST00000453421 199 ntBASIC2.33□□□□□ -2.04
PHF1O43189 AC092798.1-201ENST00000458542 409 ntBASIC2.33□□□□□ -2.04
PHF1O43189 SCARNA18-201ENST00000459004 134 ntBASIC2.33□□□□□ -2.04
PHF1O43189 RNU6-1208P-201ENST00000459588 107 ntBASIC2.33□□□□□ -2.04
PHF1O43189 RPL37P6-201ENST00000460682 294 ntBASIC2.33□□□□□ -2.04
PHF1O43189 AC003982.1-202ENST00000469928 248 ntBASIC2.33□□□□□ -2.04
PHF1O43189 TRBV1-201ENST00000476502 284 ntBASIC2.33□□□□□ -2.04
PHF1O43189 AIG1P1-201ENST00000503376 148 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms