Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.77□□□□□ -1.81
FOXN1O15353 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.77□□□□□ -1.81
FOXN1O15353 MIR4458-201ENST00000578872 75 ntBASIC3.77□□□□□ -1.81
FOXN1O15353 U2.17-201ENST00000611454 95 ntBASIC3.77□□□□□ -1.81
FOXN1O15353 MIR8062-201ENST00000621515 85 ntBASIC3.77□□□□□ -1.81
FOXN1O15353 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
FOXN1O15353 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
FOXN1O15353 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
FOXN1O15353 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
FOXN1O15353 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
FOXN1O15353 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
FOXN1O15353 AL672296.1-201ENST00000427780 2158 ntBASIC3.76□□□□□ -1.81
FOXN1O15353 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.76□□□□□ -1.81
FOXN1O15353 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.76□□□□□ -1.81
FOXN1O15353 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
FOXN1O15353 AC103710.2-202ENST00000641454 2853 ntBASIC3.76□□□□□ -1.81
FOXN1O15353 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
FOXN1O15353 RNU6-306P-201ENST00000384617 107 ntBASIC3.76□□□□□ -1.81
FOXN1O15353 RNU6-95P-201ENST00000384697 107 ntBASIC3.76□□□□□ -1.81
FOXN1O15353 MIR3074-201ENST00000384885 81 ntBASIC3.76□□□□□ -1.81
FOXN1O15353 RNU2-23P-201ENST00000410545 195 ntBASIC3.76□□□□□ -1.81
FOXN1O15353 RNU6-516P-201ENST00000411381 104 ntBASIC3.76□□□□□ -1.81
FOXN1O15353 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.76□□□□□ -1.81
FOXN1O15353 BX276092.3-201ENST00000424182 230 ntBASIC3.76□□□□□ -1.81
FOXN1O15353 USP9YP30-201ENST00000430729 455 ntBASIC3.76□□□□□ -1.81
FOXN1O15353 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.76□□□□□ -1.81
FOXN1O15353 RPL29P29-201ENST00000448725 423 ntBASIC3.76□□□□□ -1.81
FOXN1O15353 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.76□□□□□ -1.81
FOXN1O15353 AL353752.1-201ENST00000454946 260 ntBASIC3.76□□□□□ -1.81
FOXN1O15353 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.76□□□□□ -1.81
FOXN1O15353 AC133134.1-201ENST00000466800 359 ntBASIC3.76□□□□□ -1.81
FOXN1O15353 AC008571.1-201ENST00000467232 300 ntBASIC3.76□□□□□ -1.81
FOXN1O15353 AC117503.1-201ENST00000472241 394 ntBASIC3.76□□□□□ -1.81
FOXN1O15353 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.76□□□□□ -1.81
FOXN1O15353 RPL23AP55-201ENST00000498163 452 ntBASIC3.76□□□□□ -1.81
FOXN1O15353 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.76□□□□□ -1.81
FOXN1O15353 RNU6-548P-201ENST00000517083 115 ntBASIC3.76□□□□□ -1.81
FOXN1O15353 AC104027.1-201ENST00000521887 300 ntBASIC3.76□□□□□ -1.81
FOXN1O15353 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.76□□□□□ -1.81
FOXN1O15353 AC131281.1-201ENST00000522984 164 ntBASIC3.76□□□□□ -1.81
FOXN1O15353 RANP3-201ENST00000530970 276 ntBASIC3.76□□□□□ -1.81
FOXN1O15353 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.76□□□□□ -1.81
FOXN1O15353 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.76□□□□□ -1.81
FOXN1O15353 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.76□□□□□ -1.81
FOXN1O15353 RPL23AP84-201ENST00000571193 464 ntBASIC3.76□□□□□ -1.81
FOXN1O15353 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.76□□□□□ -1.81
FOXN1O15353 AL355297.3-201ENST00000604082 446 ntBASIC3.76□□□□□ -1.81
FOXN1O15353 AC008162.1-201ENST00000604718 254 ntBASIC3.76□□□□□ -1.81
FOXN1O15353 AL670379.4-201ENST00000605279 254 ntBASIC3.76□□□□□ -1.81
FOXN1O15353 AC025754.2-201ENST00000606491 432 ntBASIC3.76□□□□□ -1.81
FOXN1O15353 AC009570.1-201ENST00000609599 745 ntBASIC3.76□□□□□ -1.81
FOXN1O15353 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.76□□□□□ -1.81
FOXN1O15353 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
FOXN1O15353 AC007496.3-201ENST00000624987 3443 ntBASIC3.76□□□□□ -1.81
FOXN1O15353 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
FOXN1O15353 GABPAP-201ENST00000419271 1356 ntBASIC3.76□□□□□ -1.81
FOXN1O15353 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
FOXN1O15353 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
FOXN1O15353 Y_RNA.2-201ENST00000362330 96 ntBASIC3.75□□□□□ -1.81
FOXN1O15353 Y_RNA.210-201ENST00000364161 110 ntBASIC3.75□□□□□ -1.81
FOXN1O15353 SNORA71.1-201ENST00000364523 117 ntBASIC3.75□□□□□ -1.81
FOXN1O15353 Y_RNA.399-201ENST00000383955 105 ntBASIC3.75□□□□□ -1.81
FOXN1O15353 RNU6-128P-201ENST00000383976 107 ntBASIC3.75□□□□□ -1.81
FOXN1O15353 RNU6-472P-201ENST00000384299 107 ntBASIC3.75□□□□□ -1.81
FOXN1O15353 MIR153-1-201ENST00000384914 90 ntBASIC3.75□□□□□ -1.81
FOXN1O15353 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
FOXN1O15353 MIR764-201ENST00000390811 85 ntBASIC3.75□□□□□ -1.81
FOXN1O15353 RPLP0P7-201ENST00000416050 667 ntBASIC3.75□□□□□ -1.81
FOXN1O15353 MRPS18CP6-201ENST00000423587 223 ntBASIC3.75□□□□□ -1.81
FOXN1O15353 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.75□□□□□ -1.81
FOXN1O15353 USMG5P1-201ENST00000425964 177 ntBASIC3.75□□□□□ -1.81
FOXN1O15353 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.75□□□□□ -1.81
FOXN1O15353 AC022018.1-201ENST00000430685 241 ntBASIC3.75□□□□□ -1.81
FOXN1O15353 RPS15AP10-201ENST00000432472 382 ntBASIC3.75□□□□□ -1.81
FOXN1O15353 OSTCP8-201ENST00000445117 448 ntBASIC3.75□□□□□ -1.81
FOXN1O15353 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.75□□□□□ -1.81
FOXN1O15353 HMGN1P18-201ENST00000457642 277 ntBASIC3.75□□□□□ -1.81
FOXN1O15353 SNORD5.1-201ENST00000458800 75 ntBASIC3.75□□□□□ -1.81
FOXN1O15353 RNU2-53P-201ENST00000516257 147 ntBASIC3.75□□□□□ -1.81
FOXN1O15353 RN7SKP40-201ENST00000517211 242 ntBASIC3.75□□□□□ -1.81
FOXN1O15353 IGKV2D-23-201ENST00000518179 286 ntBASIC3.75□□□□□ -1.81
FOXN1O15353 RNU6-323P-201ENST00000521915 107 ntBASIC3.75□□□□□ -1.81
FOXN1O15353 AC023157.2-201ENST00000540596 141 ntBASIC3.75□□□□□ -1.81
FOXN1O15353 HMGB3P26-201ENST00000560051 582 ntBASIC3.75□□□□□ -1.81
FOXN1O15353 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.75□□□□□ -1.81
FOXN1O15353 AC011494.1-201ENST00000596454 237 ntBASIC3.75□□□□□ -1.81
FOXN1O15353 AC110741.2-201ENST00000605278 268 ntBASIC3.75□□□□□ -1.81
FOXN1O15353 AL021879.1-201ENST00000611756 288 ntBASIC3.75□□□□□ -1.81
FOXN1O15353 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.75□□□□□ -1.81
FOXN1O15353 AF117829.1-206ENST00000621883 3802 ntBASIC3.75□□□□□ -1.81
FOXN1O15353 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
FOXN1O15353 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
FOXN1O15353 EXOC5P1-201ENST00000510543 1969 ntBASIC3.74□□□□□ -1.81
FOXN1O15353 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
FOXN1O15353 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.74□□□□□ -1.81
FOXN1O15353 RNU1-35P-201ENST00000362782 153 ntBASIC3.74□□□□□ -1.81
FOXN1O15353 Y_RNA.106-201ENST00000363189 100 ntBASIC3.74□□□□□ -1.81
FOXN1O15353 RNU6-1059P-201ENST00000363752 98 ntBASIC3.74□□□□□ -1.81
FOXN1O15353 Y_RNA.288-201ENST00000364854 92 ntBASIC3.74□□□□□ -1.81
FOXN1O15353 RNU6-946P-201ENST00000383878 107 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms