Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AL714022.1-201ENST00000439897 151 ntBASIC2.06□□□□□ -2.08
TRIM49D1C9J1S8 AC073415.1-201ENST00000449240 153 ntBASIC2.06□□□□□ -2.08
TRIM49D1C9J1S8 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.06□□□□□ -2.08
TRIM49D1C9J1S8 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.06□□□□□ -2.08
TRIM49D1C9J1S8 RNU7-23P-201ENST00000459465 62 ntBASIC2.06□□□□□ -2.08
TRIM49D1C9J1S8 RN7SL429P-201ENST00000479090 223 ntBASIC2.06□□□□□ -2.08
TRIM49D1C9J1S8 RN7SL489P-201ENST00000486185 223 ntBASIC2.06□□□□□ -2.08
TRIM49D1C9J1S8 MRPL42P6-201ENST00000486397 371 ntBASIC2.06□□□□□ -2.08
TRIM49D1C9J1S8 RN7SL327P-201ENST00000488659 223 ntBASIC2.06□□□□□ -2.08
TRIM49D1C9J1S8 AC023194.1-201ENST00000493084 308 ntBASIC2.06□□□□□ -2.08
TRIM49D1C9J1S8 AC069439.1-201ENST00000494739 167 ntBASIC2.06□□□□□ -2.08
TRIM49D1C9J1S8 AC109927.2-201ENST00000506416 303 ntBASIC2.06□□□□□ -2.08
TRIM49D1C9J1S8 AC104806.1-201ENST00000508720 308 ntBASIC2.06□□□□□ -2.08
TRIM49D1C9J1S8 RN7SKP219-201ENST00000516825 296 ntBASIC2.06□□□□□ -2.08
TRIM49D1C9J1S8 RNU6-835P-201ENST00000516974 104 ntBASIC2.06□□□□□ -2.08
TRIM49D1C9J1S8 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.06□□□□□ -2.08
TRIM49D1C9J1S8 SUB1P1-201ENST00000524415 382 ntBASIC2.06□□□□□ -2.08
TRIM49D1C9J1S8 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.06□□□□□ -2.08
TRIM49D1C9J1S8 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.06□□□□□ -2.08
TRIM49D1C9J1S8 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.06□□□□□ -2.08
TRIM49D1C9J1S8 AP003072.2-201ENST00000527756 676 ntBASIC2.06□□□□□ -2.08
TRIM49D1C9J1S8 AC084851.1-201ENST00000529105 249 ntBASIC2.06□□□□□ -2.08
TRIM49D1C9J1S8 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.06□□□□□ -2.08
TRIM49D1C9J1S8 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.06□□□□□ -2.08
TRIM49D1C9J1S8 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.06□□□□□ -2.08
TRIM49D1C9J1S8 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.06□□□□□ -2.08
TRIM49D1C9J1S8 MIR4703-201ENST00000577728 79 ntBASIC2.06□□□□□ -2.08
TRIM49D1C9J1S8 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.06□□□□□ -2.08
TRIM49D1C9J1S8 AL670379.6-201ENST00000603753 252 ntBASIC2.06□□□□□ -2.08
TRIM49D1C9J1S8 AL670379.11-201ENST00000604059 253 ntBASIC2.06□□□□□ -2.08
TRIM49D1C9J1S8 AC008162.1-201ENST00000604718 254 ntBASIC2.06□□□□□ -2.08
TRIM49D1C9J1S8 AL670379.1-201ENST00000604752 252 ntBASIC2.06□□□□□ -2.08
TRIM49D1C9J1S8 AL670379.5-201ENST00000605253 252 ntBASIC2.06□□□□□ -2.08
TRIM49D1C9J1S8 AL670379.4-201ENST00000605279 254 ntBASIC2.06□□□□□ -2.08
TRIM49D1C9J1S8 AL670379.12-201ENST00000605291 253 ntBASIC2.06□□□□□ -2.08
TRIM49D1C9J1S8 AL670379.8-201ENST00000605353 252 ntBASIC2.06□□□□□ -2.08
TRIM49D1C9J1S8 AL670379.7-201ENST00000605823 252 ntBASIC2.06□□□□□ -2.08
TRIM49D1C9J1S8 AC090517.2-201ENST00000614966 680 ntBASIC2.06□□□□□ -2.08
TRIM49D1C9J1S8 RN7SL853P-201ENST00000617250 223 ntBASIC2.06□□□□□ -2.08
TRIM49D1C9J1S8 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.06□□□□□ -2.08
TRIM49D1C9J1S8 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.06□□□□□ -2.08
TRIM49D1C9J1S8 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.06□□□□□ -2.08
TRIM49D1C9J1S8 MTND4P35-201ENST00000604257 1375 ntBASIC2.06□□□□□ -2.08
TRIM49D1C9J1S8 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.06□□□□□ -2.08
TRIM49D1C9J1S8 ZNF658B-202ENST00000615961 3375 ntBASIC2.06□□□□□ -2.08
TRIM49D1C9J1S8 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.05□□□□□ -2.08
TRIM49D1C9J1S8 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
TRIM49D1C9J1S8 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
TRIM49D1C9J1S8 RNU6-552P-201ENST00000362869 119 ntBASIC2.05□□□□□ -2.08
TRIM49D1C9J1S8 RNU1-91P-201ENST00000364746 163 ntBASIC2.05□□□□□ -2.08
TRIM49D1C9J1S8 SNORA11.4-201ENST00000408823 129 ntBASIC2.05□□□□□ -2.08
TRIM49D1C9J1S8 RNA5SP508-201ENST00000411327 119 ntBASIC2.05□□□□□ -2.08
TRIM49D1C9J1S8 AC023141.4-201ENST00000412031 328 ntBASIC2.05□□□□□ -2.08
TRIM49D1C9J1S8 OR51A5P-201ENST00000415429 942 ntBASIC2.05□□□□□ -2.08
TRIM49D1C9J1S8 AL109913.1-201ENST00000421173 514 ntBASIC2.05□□□□□ -2.08
TRIM49D1C9J1S8 HMGN2P38-201ENST00000423806 265 ntBASIC2.05□□□□□ -2.08
TRIM49D1C9J1S8 AL160275.3-201ENST00000423876 471 ntBASIC2.05□□□□□ -2.08
TRIM49D1C9J1S8 GTF2IP20-201ENST00000431663 360 ntBASIC2.05□□□□□ -2.08
TRIM49D1C9J1S8 AC016691.1-201ENST00000441321 413 ntBASIC2.05□□□□□ -2.08
TRIM49D1C9J1S8 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.05□□□□□ -2.08
TRIM49D1C9J1S8 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.05□□□□□ -2.08
TRIM49D1C9J1S8 MTND1P1-201ENST00000445453 368 ntBASIC2.05□□□□□ -2.08
TRIM49D1C9J1S8 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.05□□□□□ -2.08
TRIM49D1C9J1S8 AC011753.1-201ENST00000451001 220 ntBASIC2.05□□□□□ -2.08
TRIM49D1C9J1S8 AC092989.1-201ENST00000481235 277 ntBASIC2.05□□□□□ -2.08
TRIM49D1C9J1S8 AC090096.1-201ENST00000489168 390 ntBASIC2.05□□□□□ -2.08
TRIM49D1C9J1S8 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.05□□□□□ -2.08
TRIM49D1C9J1S8 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.05□□□□□ -2.08
TRIM49D1C9J1S8 FAM92A1P2-202ENST00000504766 877 ntBASIC2.05□□□□□ -2.08
TRIM49D1C9J1S8 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
TRIM49D1C9J1S8 AC008413.1-201ENST00000511864 177 ntBASIC2.05□□□□□ -2.08
TRIM49D1C9J1S8 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.05□□□□□ -2.08
TRIM49D1C9J1S8 AC112206.3-201ENST00000514578 389 ntBASIC2.05□□□□□ -2.08
TRIM49D1C9J1S8 RNU1-86P-201ENST00000516108 154 ntBASIC2.05□□□□□ -2.08
TRIM49D1C9J1S8 RNU1-107P-201ENST00000516617 154 ntBASIC2.05□□□□□ -2.08
TRIM49D1C9J1S8 RNU6-685P-201ENST00000517088 95 ntBASIC2.05□□□□□ -2.08
TRIM49D1C9J1S8 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.05□□□□□ -2.08
TRIM49D1C9J1S8 AP001893.2-201ENST00000526949 202 ntBASIC2.05□□□□□ -2.08
TRIM49D1C9J1S8 AC104383.1-201ENST00000530297 370 ntBASIC2.05□□□□□ -2.08
TRIM49D1C9J1S8 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.05□□□□□ -2.08
TRIM49D1C9J1S8 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.05□□□□□ -2.08
TRIM49D1C9J1S8 AC091544.4-201ENST00000555268 342 ntBASIC2.05□□□□□ -2.08
TRIM49D1C9J1S8 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.05□□□□□ -2.08
TRIM49D1C9J1S8 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.05□□□□□ -2.08
TRIM49D1C9J1S8 MIR3616-201ENST00000584070 92 ntBASIC2.05□□□□□ -2.08
TRIM49D1C9J1S8 AC025165.5-201ENST00000602802 578 ntBASIC2.05□□□□□ -2.08
TRIM49D1C9J1S8 AC104763.2-201ENST00000604179 382 ntBASIC2.05□□□□□ -2.08
TRIM49D1C9J1S8 FTX_3.1-201ENST00000610451 147 ntBASIC2.05□□□□□ -2.08
TRIM49D1C9J1S8 AL354950.2-201ENST00000617939 290 ntBASIC2.05□□□□□ -2.08
TRIM49D1C9J1S8 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.05□□□□□ -2.08
TRIM49D1C9J1S8 AL590808.1-201ENST00000618696 141 ntBASIC2.05□□□□□ -2.08
TRIM49D1C9J1S8 SEPT14P19-203ENST00000633205 211 ntBASIC2.05□□□□□ -2.08
TRIM49D1C9J1S8 U2.21-201ENST00000637295 81 ntBASIC2.05□□□□□ -2.08
TRIM49D1C9J1S8 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.05□□□□□ -2.08
TRIM49D1C9J1S8 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.05□□□□□ -2.08
TRIM49D1C9J1S8 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.05□□□□□ -2.08
TRIM49D1C9J1S8 AC073343.1-201ENST00000328239 651 ntBASIC2.04□□□□□ -2.08
TRIM49D1C9J1S8 RNU4-12P-201ENST00000365233 139 ntBASIC2.04□□□□□ -2.08
TRIM49D1C9J1S8 RNU4-48P-201ENST00000365559 182 ntBASIC2.04□□□□□ -2.08
TRIM49D1C9J1S8 RNU6-1042P-201ENST00000384204 107 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms