Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 AL138478.1-201ENST00000612252 832 ntBASIC0.05□□□□□ -2.4
COL6A5A8TX70 MIR8065-201ENST00000620577 100 ntBASIC0.05□□□□□ -2.4
COL6A5A8TX70 AC009950.2-201ENST00000636548 183 ntBASIC0.05□□□□□ -2.4
COL6A5A8TX70 Y_RNA.180-201ENST00000363867 113 ntBASIC0.04□□□□□ -2.4
COL6A5A8TX70 U8.7-201ENST00000364940 136 ntBASIC0.04□□□□□ -2.4
COL6A5A8TX70 SNORA29-201ENST00000384183 140 ntBASIC0.04□□□□□ -2.4
COL6A5A8TX70 AL359704.1-201ENST00000411586 781 ntBASIC0.04□□□□□ -2.4
COL6A5A8TX70 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC0.04□□□□□ -2.4
COL6A5A8TX70 OFD1P3Y-201ENST00000453312 783 ntBASIC0.04□□□□□ -2.4
COL6A5A8TX70 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.04□□□□□ -2.4
COL6A5A8TX70 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.04□□□□□ -2.4
COL6A5A8TX70 AL356432.3-201ENST00000568952 465 ntBASIC0.04□□□□□ -2.4
COL6A5A8TX70 AL355877.2-201ENST00000603670 358 ntBASIC0.04□□□□□ -2.4
COL6A5A8TX70 AC093913.1-201ENST00000614178 329 ntBASIC0.04□□□□□ -2.4
COL6A5A8TX70 MIR8074-201ENST00000615081 81 ntBASIC0.04□□□□□ -2.4
COL6A5A8TX70 MIR6516-201ENST00000630554 81 ntBASIC0.04□□□□□ -2.4
COL6A5A8TX70 AC096656.1-201ENST00000623826 1364 ntBASIC0.04□□□□□ -2.4
COL6A5A8TX70 SNORD44.1-201ENST00000363202 61 ntBASIC0.04□□□□□ -2.4
COL6A5A8TX70 Y_RNA.630-201ENST00000411370 108 ntBASIC0.04□□□□□ -2.4
COL6A5A8TX70 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.04□□□□□ -2.4
COL6A5A8TX70 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.04□□□□□ -2.4
COL6A5A8TX70 Z77249.1-201ENST00000444622 1175 ntBASIC0.04□□□□□ -2.4
COL6A5A8TX70 PGBD4P5-201ENST00000445958 426 ntBASIC0.04□□□□□ -2.4
COL6A5A8TX70 AC109327.2-201ENST00000448339 378 ntBASIC0.04□□□□□ -2.4
COL6A5A8TX70 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC0.04□□□□□ -2.4
COL6A5A8TX70 RPL31P3-201ENST00000458430 332 ntBASIC0.04□□□□□ -2.4
COL6A5A8TX70 BET1P1-201ENST00000482276 359 ntBASIC0.04□□□□□ -2.4
COL6A5A8TX70 AC010469.2-201ENST00000496412 480 ntBASIC0.04□□□□□ -2.4
COL6A5A8TX70 RNU4-54P-201ENST00000516428 129 ntBASIC0.04□□□□□ -2.4
COL6A5A8TX70 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
COL6A5A8TX70 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.04□□□□□ -2.4
COL6A5A8TX70 AC136619.2-201ENST00000563361 631 ntBASIC0.04□□□□□ -2.4
COL6A5A8TX70 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.04□□□□□ -2.4
COL6A5A8TX70 AC009509.4-201ENST00000619202 509 ntBASIC0.04□□□□□ -2.4
COL6A5A8TX70 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC0.04□□□□□ -2.4
COL6A5A8TX70 Z99571.1-201ENST00000636677 394 ntBASIC0.04□□□□□ -2.4
COL6A5A8TX70 U3.9-201ENST00000363823 204 ntBASIC0.03□□□□□ -2.4
COL6A5A8TX70 Y_RNA.246-201ENST00000364495 108 ntBASIC0.03□□□□□ -2.4
COL6A5A8TX70 SNORA16.2-201ENST00000390991 127 ntBASIC0.03□□□□□ -2.4
COL6A5A8TX70 AL589994.1-201ENST00000404962 340 ntBASIC0.03□□□□□ -2.4
COL6A5A8TX70 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC0.03□□□□□ -2.4
COL6A5A8TX70 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC0.03□□□□□ -2.4
COL6A5A8TX70 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.03□□□□□ -2.4
COL6A5A8TX70 AC005832.3-201ENST00000537929 631 ntBASIC0.03□□□□□ -2.4
COL6A5A8TX70 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC0.03□□□□□ -2.4
COL6A5A8TX70 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.03□□□□□ -2.4
COL6A5A8TX70 AC021739.1-201ENST00000559631 174 ntBASIC0.03□□□□□ -2.4
COL6A5A8TX70 AL353149.1-201ENST00000610667 244 ntBASIC0.03□□□□□ -2.4
COL6A5A8TX70 AC004852.3-201ENST00000614131 326 ntBASIC0.03□□□□□ -2.4
COL6A5A8TX70 AL391597.1-201ENST00000618707 694 ntBASIC0.03□□□□□ -2.4
COL6A5A8TX70 MIR1250-201ENST00000408098 113 ntBASIC0.03□□□□□ -2.4
COL6A5A8TX70 EIF4EP2-201ENST00000422816 654 ntBASIC0.03□□□□□ -2.4
COL6A5A8TX70 ELOCP11-201ENST00000436690 332 ntBASIC0.03□□□□□ -2.4
COL6A5A8TX70 AL135790.2-201ENST00000437701 267 ntBASIC0.03□□□□□ -2.4
COL6A5A8TX70 GTF2IP13-201ENST00000438487 386 ntBASIC0.03□□□□□ -2.4
COL6A5A8TX70 ELOCP16-201ENST00000444494 332 ntBASIC0.03□□□□□ -2.4
COL6A5A8TX70 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.03□□□□□ -2.4
COL6A5A8TX70 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC0.03□□□□□ -2.4
COL6A5A8TX70 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.03□□□□□ -2.4
COL6A5A8TX70 ELOCP32-201ENST00000548625 324 ntBASIC0.03□□□□□ -2.4
COL6A5A8TX70 AL513534.2-201ENST00000603836 250 ntBASIC0.03□□□□□ -2.4
COL6A5A8TX70 LARP7P1-201ENST00000605576 316 ntBASIC0.03□□□□□ -2.4
COL6A5A8TX70 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
COL6A5A8TX70 Y_RNA.172-201ENST00000363765 102 ntBASIC0.02□□□□□ -2.41
COL6A5A8TX70 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.02□□□□□ -2.41
COL6A5A8TX70 SNORA25-201ENST00000384384 134 ntBASIC0.02□□□□□ -2.41
COL6A5A8TX70 RNU6-748P-201ENST00000384648 107 ntBASIC0.02□□□□□ -2.41
COL6A5A8TX70 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.02□□□□□ -2.41
COL6A5A8TX70 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
COL6A5A8TX70 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.02□□□□□ -2.41
COL6A5A8TX70 SNORD126-201ENST00000459475 77 ntBASIC0.02□□□□□ -2.41
COL6A5A8TX70 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC0.02□□□□□ -2.41
COL6A5A8TX70 RAB11AP2-201ENST00000545905 639 ntBASIC0.02□□□□□ -2.41
COL6A5A8TX70 AP003399.1-201ENST00000637534 361 ntBASIC0.02□□□□□ -2.41
COL6A5A8TX70 FARSBP1-201ENST00000435808 1778 ntBASIC0.02□□□□□ -2.41
COL6A5A8TX70 MIR518A1-201ENST00000385068 85 ntBASIC0.02□□□□□ -2.41
COL6A5A8TX70 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.02□□□□□ -2.41
COL6A5A8TX70 MTND4P11-201ENST00000417020 1058 ntBASIC0.02□□□□□ -2.41
COL6A5A8TX70 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.02□□□□□ -2.41
COL6A5A8TX70 AP001596.2-201ENST00000608410 312 ntBASIC0.02□□□□□ -2.41
COL6A5A8TX70 AC005832.2-201ENST00000538921 1430 ntBASIC0.02□□□□□ -2.41
COL6A5A8TX70 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC0.01□□□□□ -2.41
COL6A5A8TX70 RNU6-271P-201ENST00000363858 105 ntBASIC0.01□□□□□ -2.41
COL6A5A8TX70 SNORD114-9-201ENST00000364370 72 ntBASIC0.01□□□□□ -2.41
COL6A5A8TX70 Y_RNA.439-201ENST00000384119 94 ntBASIC0.01□□□□□ -2.41
COL6A5A8TX70 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.01□□□□□ -2.41
COL6A5A8TX70 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.01□□□□□ -2.41
COL6A5A8TX70 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.01□□□□□ -2.41
COL6A5A8TX70 CASP1-212ENST00000531166 300 ntTSL 5 BASIC0.01□□□□□ -2.41
COL6A5A8TX70 AC004584.2-201ENST00000570407 410 ntBASIC0.01□□□□□ -2.41
COL6A5A8TX70 MIR4324-201ENST00000584846 72 ntBASIC0.01□□□□□ -2.41
COL6A5A8TX70 AC121334.2-201ENST00000605387 271 ntBASIC0.01□□□□□ -2.41
COL6A5A8TX70 AC068647.2-201ENST00000637380 353 ntBASIC0.01□□□□□ -2.41
COL6A5A8TX70 RNU4-48P-201ENST00000365559 182 ntBASIC0.01□□□□□ -2.41
COL6A5A8TX70 SNORD75.1-201ENST00000408373 60 ntBASIC0.01□□□□□ -2.41
COL6A5A8TX70 AC244505.3-201ENST00000454598 187 ntBASIC0.01□□□□□ -2.41
COL6A5A8TX70 snoU109.2-201ENST00000459316 135 ntBASIC0.01□□□□□ -2.41
COL6A5A8TX70 AC091874.1-201ENST00000511402 339 ntBASIC0.01□□□□□ -2.41
COL6A5A8TX70 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.01□□□□□ -2.41
COL6A5A8TX70 RNU6-1247P-201ENST00000516622 98 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms