Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 RPS27AP14-201ENST00000422868 454 ntBASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 AC010099.3-201ENST00000423896 409 ntBASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 ELOCP14-201ENST00000428070 331 ntBASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 RPL36AP53-201ENST00000432891 316 ntBASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 USP9YP24-201ENST00000434374 697 ntBASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 ELOCP7-201ENST00000439968 331 ntBASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 FGF7P5-201ENST00000441829 291 ntBASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 BRK1P2-201ENST00000442875 223 ntBASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 USP9YP17-201ENST00000444617 696 ntBASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 ZNF736P5Y-201ENST00000451173 805 ntBASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 PMCHL2-203ENST00000457791 237 ntBASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 RNU7-23P-201ENST00000459465 62 ntBASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 SNORD11.1-201ENST00000459482 85 ntBASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 AC114981.1-201ENST00000503897 678 ntBASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 SCARNA11.3-201ENST00000517276 130 ntBASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 NAP1L1P1-201ENST00000524793 1063 ntBASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 MIR4714-201ENST00000580728 77 ntBASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 AC245884.10-201ENST00000597355 337 ntBASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 AC013244.3-201ENST00000605614 388 ntBASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 AL031775.1-201ENST00000607014 887 ntBASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 AC239868.4-201ENST00000608318 671 ntBASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 Y_RNA.85-201ENST00000363014 111 ntBASIC0.97□□□□□ -2.25
COL6A6A6NMZ7 Y_RNA.234-201ENST00000364409 97 ntBASIC0.97□□□□□ -2.25
COL6A6A6NMZ7 RNU5E-6P-201ENST00000365574 115 ntBASIC0.97□□□□□ -2.25
COL6A6A6NMZ7 MIR513B-201ENST00000385136 84 ntBASIC0.97□□□□□ -2.25
COL6A6A6NMZ7 RNU6-584P-201ENST00000410350 95 ntBASIC0.97□□□□□ -2.25
COL6A6A6NMZ7 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC0.97□□□□□ -2.25
COL6A6A6NMZ7 AC019178.2-201ENST00000423595 505 ntBASIC0.97□□□□□ -2.25
COL6A6A6NMZ7 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.97□□□□□ -2.25
COL6A6A6NMZ7 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.97□□□□□ -2.25
COL6A6A6NMZ7 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.97□□□□□ -2.25
COL6A6A6NMZ7 AL596276.1-201ENST00000434465 418 ntBASIC0.97□□□□□ -2.25
COL6A6A6NMZ7 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC0.97□□□□□ -2.25
COL6A6A6NMZ7 AL121601.2-201ENST00000438019 707 ntBASIC0.97□□□□□ -2.25
COL6A6A6NMZ7 AC092989.1-201ENST00000481235 277 ntBASIC0.97□□□□□ -2.25
COL6A6A6NMZ7 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC0.97□□□□□ -2.25
COL6A6A6NMZ7 RNU6-311P-201ENST00000516224 102 ntBASIC0.97□□□□□ -2.25
COL6A6A6NMZ7 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC0.97□□□□□ -2.25
COL6A6A6NMZ7 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC0.97□□□□□ -2.25
COL6A6A6NMZ7 MIR4782-201ENST00000577987 79 ntBASIC0.97□□□□□ -2.25
COL6A6A6NMZ7 MIR5697-201ENST00000578045 78 ntBASIC0.97□□□□□ -2.25
COL6A6A6NMZ7 MIR4765-201ENST00000585007 77 ntBASIC0.97□□□□□ -2.25
COL6A6A6NMZ7 AC211469.2-201ENST00000605461 205 ntBASIC0.97□□□□□ -2.25
COL6A6A6NMZ7 AL355816.2-201ENST00000610049 647 ntBASIC0.97□□□□□ -2.25
COL6A6A6NMZ7 AC008498.1-201ENST00000613012 531 ntBASIC0.97□□□□□ -2.25
COL6A6A6NMZ7 AC079395.3-201ENST00000615161 484 ntBASIC0.97□□□□□ -2.25
COL6A6A6NMZ7 AC022960.3-201ENST00000619794 441 ntBASIC0.97□□□□□ -2.25
COL6A6A6NMZ7 AC068057.2-201ENST00000624047 895 ntBASIC0.97□□□□□ -2.25
COL6A6A6NMZ7 AC010889.1-201ENST00000566193 2666 ntBASIC0.97□□□□□ -2.25
COL6A6A6NMZ7 AL445523.1-201ENST00000451184 1362 ntBASIC0.97□□□□□ -2.25
COL6A6A6NMZ7 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 RNU6-942P-201ENST00000363002 107 ntBASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 SNORA46.1-201ENST00000391069 153 ntBASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 RN7SKP200-201ENST00000410564 320 ntBASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 UBE2FP1-201ENST00000416536 447 ntBASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 AL589872.1-201ENST00000426602 288 ntBASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 CALM2P2-201ENST00000428512 440 ntBASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 RPL37P21-201ENST00000435890 276 ntBASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 GDI2P2-201ENST00000445131 608 ntBASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 OR6C5P-201ENST00000452388 923 ntBASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 RPL26P9-201ENST00000457466 433 ntBASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 SNORD97-201ENST00000459187 142 ntBASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 SNORD42A-201ENST00000459584 64 ntBASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 RNA5SP291-201ENST00000517222 105 ntBASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 AL132857.1-201ENST00000555180 708 ntBASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 AC091489.2-201ENST00000566263 604 ntBASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 MIR5194-201ENST00000582634 120 ntBASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 AC008751.2-201ENST00000597885 980 ntBASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 AL365204.3-201ENST00000612448 685 ntBASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 AL161722.3-201ENST00000605789 2983 ntBASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 MTND5P30-201ENST00000452896 1731 ntBASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 RNU6-946P-201ENST00000383878 107 ntBASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 MIR888-201ENST00000401186 77 ntBASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 AC096649.2-201ENST00000416186 393 ntBASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 AC138623.1-201ENST00000418060 216 ntBASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 AC007919.1-201ENST00000429380 217 ntBASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 RPS15AP5-201ENST00000436276 388 ntBASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 MTND4P25-201ENST00000441039 533 ntBASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 AC012308.1-201ENST00000451232 178 ntBASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 AC107626.1-201ENST00000471084 183 ntBASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 AL160314.1-201ENST00000490836 438 ntBASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 RPS27AP10-201ENST00000496103 208 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms