Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 Y_RNA.124-201ENST00000363339 93 ntBASIC0.09□□□□□ -2.4
CPSF4LA6NMK7 RNU6-11P-201ENST00000364234 107 ntBASIC0.09□□□□□ -2.4
CPSF4LA6NMK7 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.09□□□□□ -2.4
CPSF4LA6NMK7 RNU6-1-201ENST00000383898 107 ntBASIC0.09□□□□□ -2.4
CPSF4LA6NMK7 RNU6-42P-201ENST00000384165 107 ntBASIC0.09□□□□□ -2.4
CPSF4LA6NMK7 RNU6-36P-201ENST00000384172 107 ntBASIC0.09□□□□□ -2.4
CPSF4LA6NMK7 RNU6-4P-201ENST00000384205 107 ntBASIC0.09□□□□□ -2.4
CPSF4LA6NMK7 RNU6-5P-201ENST00000384238 107 ntBASIC0.09□□□□□ -2.4
CPSF4LA6NMK7 RNU6-3P-201ENST00000384314 107 ntBASIC0.09□□□□□ -2.4
CPSF4LA6NMK7 RNU6-2-201ENST00000384627 107 ntBASIC0.09□□□□□ -2.4
CPSF4LA6NMK7 RNU6-9-201ENST00000384776 107 ntBASIC0.09□□□□□ -2.4
CPSF4LA6NMK7 RNU6-33P-201ENST00000384793 107 ntBASIC0.09□□□□□ -2.4
CPSF4LA6NMK7 MIR548B-201ENST00000385247 97 ntBASIC0.09□□□□□ -2.4
CPSF4LA6NMK7 MIR1302-8-201ENST00000408342 128 ntBASIC0.09□□□□□ -2.4
CPSF4LA6NMK7 RNU2-32P-201ENST00000411193 191 ntBASIC0.09□□□□□ -2.4
CPSF4LA6NMK7 FAM204CP-201ENST00000424489 642 ntBASIC0.09□□□□□ -2.4
CPSF4LA6NMK7 SNX2P2-201ENST00000424553 323 ntBASIC0.09□□□□□ -2.4
CPSF4LA6NMK7 AC104651.1-201ENST00000427559 735 ntBASIC0.09□□□□□ -2.4
CPSF4LA6NMK7 AL445305.1-201ENST00000432577 575 ntBASIC0.09□□□□□ -2.4
CPSF4LA6NMK7 AL596276.1-201ENST00000434465 418 ntBASIC0.09□□□□□ -2.4
CPSF4LA6NMK7 AC010631.1-201ENST00000474150 156 ntBASIC0.09□□□□□ -2.4
CPSF4LA6NMK7 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC0.09□□□□□ -2.4
CPSF4LA6NMK7 RNA5SP503-201ENST00000517047 117 ntBASIC0.09□□□□□ -2.4
CPSF4LA6NMK7 SNORA70.22-201ENST00000517160 124 ntBASIC0.09□□□□□ -2.4
CPSF4LA6NMK7 RNU6-165P-201ENST00000517170 99 ntBASIC0.09□□□□□ -2.4
CPSF4LA6NMK7 AP001893.2-201ENST00000526949 202 ntBASIC0.09□□□□□ -2.4
CPSF4LA6NMK7 AP003392.2-201ENST00000527269 208 ntBASIC0.09□□□□□ -2.4
CPSF4LA6NMK7 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC0.09□□□□□ -2.4
CPSF4LA6NMK7 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC0.09□□□□□ -2.4
CPSF4LA6NMK7 AL357094.1-201ENST00000603845 844 ntBASIC0.09□□□□□ -2.4
CPSF4LA6NMK7 AC112191.3-201ENST00000604371 277 ntBASIC0.09□□□□□ -2.4
CPSF4LA6NMK7 AL353765.1-201ENST00000605514 183 ntBASIC0.09□□□□□ -2.4
CPSF4LA6NMK7 RNU6-6P-201ENST00000606623 107 ntBASIC0.09□□□□□ -2.4
CPSF4LA6NMK7 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.09□□□□□ -2.4
CPSF4LA6NMK7 RMST_2.1-201ENST00000617263 136 ntBASIC0.09□□□□□ -2.4
CPSF4LA6NMK7 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC0.09□□□□□ -2.4
CPSF4LA6NMK7 AC092447.10-201ENST00000620607 1652 ntBASIC0.08□□□□□ -2.4
CPSF4LA6NMK7 AL391994.1-201ENST00000254724 282 ntBASIC0.08□□□□□ -2.4
CPSF4LA6NMK7 Y_RNA.99-201ENST00000363138 105 ntBASIC0.08□□□□□ -2.4
CPSF4LA6NMK7 RNU6-23P-201ENST00000363283 107 ntBASIC0.08□□□□□ -2.4
CPSF4LA6NMK7 MIR421-201ENST00000365696 85 ntBASIC0.08□□□□□ -2.4
CPSF4LA6NMK7 RNU6-360P-201ENST00000390944 104 ntBASIC0.08□□□□□ -2.4
CPSF4LA6NMK7 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.08□□□□□ -2.4
CPSF4LA6NMK7 AC063976.4-201ENST00000421971 163 ntBASIC0.08□□□□□ -2.4
CPSF4LA6NMK7 AL022400.1-201ENST00000423946 935 ntBASIC0.08□□□□□ -2.4
CPSF4LA6NMK7 RPL36AP53-201ENST00000432891 316 ntBASIC0.08□□□□□ -2.4
CPSF4LA6NMK7 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC0.08□□□□□ -2.4
CPSF4LA6NMK7 COX7A2P2-201ENST00000505291 250 ntBASIC0.08□□□□□ -2.4
CPSF4LA6NMK7 SNORA3.4-201ENST00000515969 96 ntBASIC0.08□□□□□ -2.4
CPSF4LA6NMK7 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
CPSF4LA6NMK7 MTCO2P15-201ENST00000532655 656 ntBASIC0.08□□□□□ -2.4
CPSF4LA6NMK7 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC0.08□□□□□ -2.4
CPSF4LA6NMK7 TRAV32-201ENST00000553993 340 ntBASIC0.08□□□□□ -2.4
CPSF4LA6NMK7 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.08□□□□□ -2.4
CPSF4LA6NMK7 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.08□□□□□ -2.4
CPSF4LA6NMK7 AC004805.2-201ENST00000605382 482 ntBASIC0.08□□□□□ -2.4
CPSF4LA6NMK7 AC009237.15-201ENST00000610252 501 ntBASIC0.08□□□□□ -2.4
CPSF4LA6NMK7 AP005212.4-201ENST00000614206 710 ntBASIC0.08□□□□□ -2.4
CPSF4LA6NMK7 AC013476.2-201ENST00000614456 459 ntBASIC0.08□□□□□ -2.4
CPSF4LA6NMK7 AC022709.1-201ENST00000615967 87 ntBASIC0.08□□□□□ -2.4
CPSF4LA6NMK7 AC008993.2-201ENST00000631744 806 ntBASIC0.08□□□□□ -2.4
CPSF4LA6NMK7 RNA5SP493-201ENST00000364115 91 ntBASIC0.07□□□□□ -2.4
CPSF4LA6NMK7 Y_RNA.255-201ENST00000364581 97 ntBASIC0.07□□□□□ -2.4
CPSF4LA6NMK7 Y_RNA.354-201ENST00000365448 111 ntBASIC0.07□□□□□ -2.4
CPSF4LA6NMK7 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
CPSF4LA6NMK7 RNY1P14-201ENST00000384426 108 ntBASIC0.07□□□□□ -2.4
CPSF4LA6NMK7 MIR200A-201ENST00000384875 90 ntBASIC0.07□□□□□ -2.4
CPSF4LA6NMK7 MIR194-1-201ENST00000384892 85 ntBASIC0.07□□□□□ -2.4
CPSF4LA6NMK7 RPL22P22-201ENST00000395439 379 ntBASIC0.07□□□□□ -2.4
CPSF4LA6NMK7 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
CPSF4LA6NMK7 AC008267.5-201ENST00000424928 265 ntBASIC0.07□□□□□ -2.4
CPSF4LA6NMK7 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.07□□□□□ -2.4
CPSF4LA6NMK7 AC002429.1-201ENST00000437672 148 ntBASIC0.07□□□□□ -2.4
CPSF4LA6NMK7 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.07□□□□□ -2.4
CPSF4LA6NMK7 AC092685.1-201ENST00000447960 1243 ntBASIC0.07□□□□□ -2.4
CPSF4LA6NMK7 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.07□□□□□ -2.4
CPSF4LA6NMK7 AC114982.2-201ENST00000461396 358 ntBASIC0.07□□□□□ -2.4
CPSF4LA6NMK7 RPL7P43-201ENST00000478876 753 ntBASIC0.07□□□□□ -2.4
CPSF4LA6NMK7 AC108740.1-201ENST00000498629 225 ntBASIC0.07□□□□□ -2.4
CPSF4LA6NMK7 AKIRIN2P1-201ENST00000505898 352 ntBASIC0.07□□□□□ -2.4
CPSF4LA6NMK7 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.07□□□□□ -2.4
CPSF4LA6NMK7 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.07□□□□□ -2.4
CPSF4LA6NMK7 RNA5SP255-201ENST00000516370 107 ntBASIC0.07□□□□□ -2.4
CPSF4LA6NMK7 ARL2BPP5-201ENST00000523141 481 ntBASIC0.07□□□□□ -2.4
CPSF4LA6NMK7 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC0.07□□□□□ -2.4
CPSF4LA6NMK7 AC092451.2-201ENST00000538746 658 ntBASIC0.07□□□□□ -2.4
CPSF4LA6NMK7 AL121579.1-201ENST00000555129 305 ntBASIC0.07□□□□□ -2.4
CPSF4LA6NMK7 AC093249.1-201ENST00000567049 203 ntBASIC0.07□□□□□ -2.4
CPSF4LA6NMK7 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.07□□□□□ -2.4
CPSF4LA6NMK7 AL603758.1-201ENST00000618654 241 ntBASIC0.07□□□□□ -2.4
CPSF4LA6NMK7 AL158163.2-201ENST00000619110 700 ntBASIC0.07□□□□□ -2.4
CPSF4LA6NMK7 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
CPSF4LA6NMK7 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC0.07□□□□□ -2.4
CPSF4LA6NMK7 MIR924-201ENST00000638017 53 ntBASIC0.07□□□□□ -2.4
CPSF4LA6NMK7 ENSAP3-201ENST00000312710 333 ntBASIC0.06□□□□□ -2.4
CPSF4LA6NMK7 RNU6-349P-201ENST00000362402 107 ntBASIC0.06□□□□□ -2.4
CPSF4LA6NMK7 RNU6-386P-201ENST00000362650 107 ntBASIC0.06□□□□□ -2.4
CPSF4LA6NMK7 RNU6-1339P-201ENST00000363574 91 ntBASIC0.06□□□□□ -2.4
CPSF4LA6NMK7 RNU6-546P-201ENST00000383991 107 ntBASIC0.06□□□□□ -2.4
CPSF4LA6NMK7 RNU6-1274P-201ENST00000384557 107 ntBASIC0.06□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms