Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 AP003034.1-201ENST00000534621 422 ntBASIC0.23□□□□□ -2.37
CNOT1A5YKK6 RAB11AP2-201ENST00000545905 639 ntBASIC0.23□□□□□ -2.37
CNOT1A5YKK6 AC006199.1-201ENST00000548728 219 ntBASIC0.23□□□□□ -2.37
CNOT1A5YKK6 FAM60CP-201ENST00000591086 664 ntBASIC0.23□□□□□ -2.37
CNOT1A5YKK6 AC004987.4-201ENST00000603383 338 ntBASIC0.23□□□□□ -2.37
CNOT1A5YKK6 AC080013.4-201ENST00000607624 649 ntBASIC0.23□□□□□ -2.37
CNOT1A5YKK6 AL359314.1-201ENST00000616913 261 ntBASIC0.23□□□□□ -2.37
CNOT1A5YKK6 MIR101-1-201ENST00000362265 75 ntBASIC0.23□□□□□ -2.37
CNOT1A5YKK6 U3.8-201ENST00000363675 217 ntBASIC0.23□□□□□ -2.37
CNOT1A5YKK6 RNU6-217P-201ENST00000384164 104 ntBASIC0.23□□□□□ -2.37
CNOT1A5YKK6 MIR214-201ENST00000385214 110 ntBASIC0.23□□□□□ -2.37
CNOT1A5YKK6 TAF9BP2-201ENST00000400856 499 ntBASIC0.23□□□□□ -2.37
CNOT1A5YKK6 BPY2DP-201ENST00000422208 265 ntBASIC0.23□□□□□ -2.37
CNOT1A5YKK6 NDUFB4P10-201ENST00000452541 359 ntBASIC0.23□□□□□ -2.37
CNOT1A5YKK6 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC0.23□□□□□ -2.37
CNOT1A5YKK6 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
CNOT1A5YKK6 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.23□□□□□ -2.37
CNOT1A5YKK6 CENPUP1-201ENST00000526649 1202 ntBASIC0.23□□□□□ -2.37
CNOT1A5YKK6 LSM6P2-201ENST00000552208 177 ntBASIC0.23□□□□□ -2.37
CNOT1A5YKK6 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC0.23□□□□□ -2.37
CNOT1A5YKK6 AC015688.2-201ENST00000584523 262 ntBASIC0.23□□□□□ -2.37
CNOT1A5YKK6 Z83818.1-201ENST00000603584 150 ntBASIC0.23□□□□□ -2.37
CNOT1A5YKK6 AC018618.2-201ENST00000604770 446 ntBASIC0.23□□□□□ -2.37
CNOT1A5YKK6 U4.2-201ENST00000618561 85 ntBASIC0.23□□□□□ -2.37
CNOT1A5YKK6 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.23□□□□□ -2.37
CNOT1A5YKK6 AC009033.1-201ENST00000624279 431 ntBASIC0.23□□□□□ -2.37
CNOT1A5YKK6 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.23□□□□□ -2.37
CNOT1A5YKK6 SNORD18A-201ENST00000363753 72 ntBASIC0.22□□□□□ -2.37
CNOT1A5YKK6 RNA5SP205-201ENST00000364653 136 ntBASIC0.22□□□□□ -2.37
CNOT1A5YKK6 MIR518D-201ENST00000385014 87 ntBASIC0.22□□□□□ -2.37
CNOT1A5YKK6 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.22□□□□□ -2.37
CNOT1A5YKK6 C1DP1-201ENST00000426049 402 ntBASIC0.22□□□□□ -2.37
CNOT1A5YKK6 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC0.22□□□□□ -2.37
CNOT1A5YKK6 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
CNOT1A5YKK6 RAP1BP2-201ENST00000478270 544 ntBASIC0.22□□□□□ -2.37
CNOT1A5YKK6 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC0.22□□□□□ -2.37
CNOT1A5YKK6 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC0.22□□□□□ -2.37
CNOT1A5YKK6 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.22□□□□□ -2.37
CNOT1A5YKK6 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.22□□□□□ -2.37
CNOT1A5YKK6 CYB5AP5-201ENST00000549779 389 ntBASIC0.22□□□□□ -2.37
CNOT1A5YKK6 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.22□□□□□ -2.37
CNOT1A5YKK6 AL049870.4-201ENST00000555741 486 ntBASIC0.22□□□□□ -2.37
CNOT1A5YKK6 uc_338.6-201ENST00000613544 171 ntBASIC0.22□□□□□ -2.37
CNOT1A5YKK6 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.22□□□□□ -2.37
CNOT1A5YKK6 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.21□□□□□ -2.38
CNOT1A5YKK6 OR5T3-201ENST00000303059 1023 ntBASIC0.21□□□□□ -2.38
CNOT1A5YKK6 RNU6-46P-201ENST00000383860 107 ntBASIC0.21□□□□□ -2.38
CNOT1A5YKK6 SNORA29-201ENST00000384183 140 ntBASIC0.21□□□□□ -2.38
CNOT1A5YKK6 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC0.21□□□□□ -2.38
CNOT1A5YKK6 AC132479.1-201ENST00000449160 144 ntBASIC0.21□□□□□ -2.38
CNOT1A5YKK6 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC0.21□□□□□ -2.38
CNOT1A5YKK6 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.21□□□□□ -2.38
CNOT1A5YKK6 AC100812.1-201ENST00000607622 580 ntBASIC0.21□□□□□ -2.38
CNOT1A5YKK6 AC005021.1-201ENST00000608730 355 ntBASIC0.21□□□□□ -2.38
CNOT1A5YKK6 uc_338.15-201ENST00000615470 191 ntBASIC0.21□□□□□ -2.38
CNOT1A5YKK6 MTND2P41-201ENST00000637599 773 ntBASIC0.21□□□□□ -2.38
CNOT1A5YKK6 Z75746.1-201ENST00000440243 2080 ntBASIC0.21□□□□□ -2.38
CNOT1A5YKK6 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.21□□□□□ -2.38
CNOT1A5YKK6 AC138393.1-203ENST00000327086 343 ntBASIC0.21□□□□□ -2.38
CNOT1A5YKK6 DDX3P2-201ENST00000446138 111 ntBASIC0.21□□□□□ -2.38
CNOT1A5YKK6 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.21□□□□□ -2.38
CNOT1A5YKK6 snoU13.21-201ENST00000459368 105 ntBASIC0.21□□□□□ -2.38
CNOT1A5YKK6 ACA64.5-201ENST00000516207 127 ntBASIC0.21□□□□□ -2.38
CNOT1A5YKK6 RNU4ATAC10P-201ENST00000516967 122 ntBASIC0.21□□□□□ -2.38
CNOT1A5YKK6 NRON-201ENST00000517270 370 ntBASIC0.21□□□□□ -2.38
CNOT1A5YKK6 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.21□□□□□ -2.38
CNOT1A5YKK6 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.21□□□□□ -2.38
CNOT1A5YKK6 MIR4645-201ENST00000583158 77 ntBASIC0.21□□□□□ -2.38
CNOT1A5YKK6 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.21□□□□□ -2.38
CNOT1A5YKK6 AL022345.1-201ENST00000607292 135 ntBASIC0.21□□□□□ -2.38
CNOT1A5YKK6 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.21□□□□□ -2.38
CNOT1A5YKK6 SNORD82-201ENST00000365530 70 ntBASIC0.2□□□□□ -2.38
CNOT1A5YKK6 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.2□□□□□ -2.38
CNOT1A5YKK6 AL590383.1-201ENST00000428602 75 ntBASIC0.2□□□□□ -2.38
CNOT1A5YKK6 RAC1P7-201ENST00000445367 377 ntBASIC0.2□□□□□ -2.38
CNOT1A5YKK6 VPS26AP1-201ENST00000483197 979 ntBASIC0.2□□□□□ -2.38
CNOT1A5YKK6 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC0.2□□□□□ -2.38
CNOT1A5YKK6 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.2□□□□□ -2.38
CNOT1A5YKK6 AL158211.1-201ENST00000566763 763 ntBASIC0.2□□□□□ -2.38
CNOT1A5YKK6 AC018926.3-201ENST00000618841 406 ntBASIC0.2□□□□□ -2.38
CNOT1A5YKK6 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
CNOT1A5YKK6 MIR1303-201ENST00000408625 86 ntBASIC0.2□□□□□ -2.38
CNOT1A5YKK6 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.2□□□□□ -2.38
CNOT1A5YKK6 RPS26P42-201ENST00000413485 326 ntBASIC0.2□□□□□ -2.38
CNOT1A5YKK6 AC244023.1-201ENST00000426884 112 ntBASIC0.2□□□□□ -2.38
CNOT1A5YKK6 FABP5P14-201ENST00000437273 393 ntBASIC0.2□□□□□ -2.38
CNOT1A5YKK6 AC098831.1-201ENST00000440661 216 ntBASIC0.2□□□□□ -2.38
CNOT1A5YKK6 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC0.2□□□□□ -2.38
CNOT1A5YKK6 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC0.2□□□□□ -2.38
CNOT1A5YKK6 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC0.2□□□□□ -2.38
CNOT1A5YKK6 AC010409.1-201ENST00000487382 476 ntBASIC0.2□□□□□ -2.38
CNOT1A5YKK6 MAL2-206ENST00000522187 547 ntTSL 4 BASIC0.2□□□□□ -2.38
CNOT1A5YKK6 HSPA8P13-201ENST00000523715 472 ntBASIC0.2□□□□□ -2.38
CNOT1A5YKK6 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.2□□□□□ -2.38
CNOT1A5YKK6 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.2□□□□□ -2.38
CNOT1A5YKK6 AL391813.1-201ENST00000603098 260 ntBASIC0.2□□□□□ -2.38
CNOT1A5YKK6 AP000403.1-201ENST00000603349 851 ntBASIC0.2□□□□□ -2.38
CNOT1A5YKK6 AC242498.1-201ENST00000604134 111 ntBASIC0.2□□□□□ -2.38
CNOT1A5YKK6 AL022345.2-201ENST00000606307 135 ntBASIC0.2□□□□□ -2.38
CNOT1A5YKK6 AL365204.3-201ENST00000612448 685 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms