Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 SNORD114-27-201ENST00000363766 70 ntBASIC0.48□□□□□ -2.33
TCRBV3S1A0A5B6 RNU6-743P-201ENST00000364151 106 ntBASIC0.48□□□□□ -2.33
TCRBV3S1A0A5B6 RNU6-392P-201ENST00000364926 101 ntBASIC0.48□□□□□ -2.33
TCRBV3S1A0A5B6 MIR508-201ENST00000384857 115 ntBASIC0.48□□□□□ -2.33
TCRBV3S1A0A5B6 ZNF736P10Y-201ENST00000403990 1110 ntBASIC0.48□□□□□ -2.33
TCRBV3S1A0A5B6 FTH1P15-201ENST00000406984 280 ntBASIC0.48□□□□□ -2.33
TCRBV3S1A0A5B6 AC244505.5-201ENST00000443639 207 ntBASIC0.48□□□□□ -2.33
TCRBV3S1A0A5B6 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC0.48□□□□□ -2.33
TCRBV3S1A0A5B6 MTND1P9-201ENST00000453775 944 ntBASIC0.48□□□□□ -2.33
TCRBV3S1A0A5B6 RPL30P6-201ENST00000475925 342 ntBASIC0.48□□□□□ -2.33
TCRBV3S1A0A5B6 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC0.48□□□□□ -2.33
TCRBV3S1A0A5B6 HMGN1P13-201ENST00000505795 138 ntBASIC0.48□□□□□ -2.33
TCRBV3S1A0A5B6 CYCSP23-201ENST00000519781 313 ntBASIC0.48□□□□□ -2.33
TCRBV3S1A0A5B6 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC0.48□□□□□ -2.33
TCRBV3S1A0A5B6 AL512310.8-201ENST00000550183 120 ntBASIC0.48□□□□□ -2.33
TCRBV3S1A0A5B6 AC138915.2-201ENST00000569776 97 ntBASIC0.48□□□□□ -2.33
TCRBV3S1A0A5B6 MTCO2P2-201ENST00000591258 225 ntBASIC0.48□□□□□ -2.33
TCRBV3S1A0A5B6 AL022345.2-201ENST00000606307 135 ntBASIC0.48□□□□□ -2.33
TCRBV3S1A0A5B6 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.48□□□□□ -2.33
TCRBV3S1A0A5B6 uc_338.17-201ENST00000619633 179 ntBASIC0.48□□□□□ -2.33
TCRBV3S1A0A5B6 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.47□□□□□ -2.33
TCRBV3S1A0A5B6 MIR548B-201ENST00000385247 97 ntBASIC0.47□□□□□ -2.33
TCRBV3S1A0A5B6 RNU6-360P-201ENST00000390944 104 ntBASIC0.47□□□□□ -2.33
TCRBV3S1A0A5B6 AL117342.1-201ENST00000404861 406 ntBASIC0.47□□□□□ -2.33
TCRBV3S1A0A5B6 AC114482.1-201ENST00000418010 247 ntBASIC0.47□□□□□ -2.33
TCRBV3S1A0A5B6 AC027644.1-201ENST00000419595 298 ntBASIC0.47□□□□□ -2.33
TCRBV3S1A0A5B6 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.47□□□□□ -2.33
TCRBV3S1A0A5B6 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC0.47□□□□□ -2.33
TCRBV3S1A0A5B6 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.47□□□□□ -2.33
TCRBV3S1A0A5B6 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.47□□□□□ -2.33
TCRBV3S1A0A5B6 KATNBL1P3-201ENST00000443475 909 ntBASIC0.47□□□□□ -2.33
TCRBV3S1A0A5B6 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC0.47□□□□□ -2.33
TCRBV3S1A0A5B6 AC104058.1-201ENST00000448028 297 ntBASIC0.47□□□□□ -2.33
TCRBV3S1A0A5B6 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.47□□□□□ -2.33
TCRBV3S1A0A5B6 AC130509.1-201ENST00000464158 433 ntBASIC0.47□□□□□ -2.33
TCRBV3S1A0A5B6 AC010631.1-201ENST00000474150 156 ntBASIC0.47□□□□□ -2.33
TCRBV3S1A0A5B6 RAP1BP2-201ENST00000478270 544 ntBASIC0.47□□□□□ -2.33
TCRBV3S1A0A5B6 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.47□□□□□ -2.33
TCRBV3S1A0A5B6 AC108210.2-201ENST00000503681 201 ntBASIC0.47□□□□□ -2.33
TCRBV3S1A0A5B6 SNORA3.4-201ENST00000515969 96 ntBASIC0.47□□□□□ -2.33
TCRBV3S1A0A5B6 RN7SKP219-201ENST00000516825 296 ntBASIC0.47□□□□□ -2.33
TCRBV3S1A0A5B6 RN7SKP258-201ENST00000517151 304 ntBASIC0.47□□□□□ -2.33
TCRBV3S1A0A5B6 AC009902.1-201ENST00000519351 183 ntBASIC0.47□□□□□ -2.33
TCRBV3S1A0A5B6 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC0.47□□□□□ -2.33
TCRBV3S1A0A5B6 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.47□□□□□ -2.33
TCRBV3S1A0A5B6 AC093012.1-202ENST00000549403 582 ntBASIC0.47□□□□□ -2.33
TCRBV3S1A0A5B6 AC015712.3-201ENST00000559380 164 ntBASIC0.47□□□□□ -2.33
TCRBV3S1A0A5B6 BNIP3P10-201ENST00000605360 577 ntBASIC0.47□□□□□ -2.33
TCRBV3S1A0A5B6 AC093788.1-201ENST00000609356 927 ntBASIC0.47□□□□□ -2.33
TCRBV3S1A0A5B6 AL365204.3-201ENST00000612448 685 ntBASIC0.47□□□□□ -2.33
TCRBV3S1A0A5B6 uc_338.15-201ENST00000615470 191 ntBASIC0.47□□□□□ -2.33
TCRBV3S1A0A5B6 AC010975.3-201ENST00000618727 978 ntBASIC0.47□□□□□ -2.33
TCRBV3S1A0A5B6 AL445264.1-201ENST00000621719 171 ntBASIC0.47□□□□□ -2.33
TCRBV3S1A0A5B6 OR4G3P-201ENST00000633500 913 ntBASIC0.47□□□□□ -2.33
TCRBV3S1A0A5B6 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC0.47□□□□□ -2.33
TCRBV3S1A0A5B6 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.46□□□□□ -2.34
TCRBV3S1A0A5B6 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
TCRBV3S1A0A5B6 Y_RNA.25-201ENST00000362528 102 ntBASIC0.46□□□□□ -2.34
TCRBV3S1A0A5B6 RNU6-223P-201ENST00000362830 107 ntBASIC0.46□□□□□ -2.34
TCRBV3S1A0A5B6 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.46□□□□□ -2.34
TCRBV3S1A0A5B6 RNU6-549P-201ENST00000384433 107 ntBASIC0.46□□□□□ -2.34
TCRBV3S1A0A5B6 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.46□□□□□ -2.34
TCRBV3S1A0A5B6 RNU6-932P-201ENST00000391108 106 ntBASIC0.46□□□□□ -2.34
TCRBV3S1A0A5B6 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC0.46□□□□□ -2.34
TCRBV3S1A0A5B6 AL589872.1-201ENST00000426602 288 ntBASIC0.46□□□□□ -2.34
TCRBV3S1A0A5B6 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC0.46□□□□□ -2.34
TCRBV3S1A0A5B6 HSPE1P9-201ENST00000440046 311 ntBASIC0.46□□□□□ -2.34
TCRBV3S1A0A5B6 MTND1P18-201ENST00000448191 573 ntBASIC0.46□□□□□ -2.34
TCRBV3S1A0A5B6 RPS27P22-201ENST00000478056 241 ntBASIC0.46□□□□□ -2.34
TCRBV3S1A0A5B6 RN7SL429P-201ENST00000479090 223 ntBASIC0.46□□□□□ -2.34
TCRBV3S1A0A5B6 RN7SL489P-201ENST00000486185 223 ntBASIC0.46□□□□□ -2.34
TCRBV3S1A0A5B6 RN7SL327P-201ENST00000488659 223 ntBASIC0.46□□□□□ -2.34
TCRBV3S1A0A5B6 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.46□□□□□ -2.34
TCRBV3S1A0A5B6 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.46□□□□□ -2.34
TCRBV3S1A0A5B6 RNU6-991P-201ENST00000516168 107 ntBASIC0.46□□□□□ -2.34
TCRBV3S1A0A5B6 RNU6-390P-201ENST00000516259 103 ntBASIC0.46□□□□□ -2.34
TCRBV3S1A0A5B6 RNU6-197P-201ENST00000516680 100 ntBASIC0.46□□□□□ -2.34
TCRBV3S1A0A5B6 RNU6-1092P-201ENST00000516955 87 ntBASIC0.46□□□□□ -2.34
TCRBV3S1A0A5B6 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.46□□□□□ -2.34
TCRBV3S1A0A5B6 UTP23-205ENST00000520733 369 ntTSL 3 BASIC0.46□□□□□ -2.34
TCRBV3S1A0A5B6 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.46□□□□□ -2.34
TCRBV3S1A0A5B6 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.46□□□□□ -2.34
TCRBV3S1A0A5B6 AC005786.1-201ENST00000588553 154 ntBASIC0.46□□□□□ -2.34
TCRBV3S1A0A5B6 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC0.46□□□□□ -2.34
TCRBV3S1A0A5B6 AL133445.2-201ENST00000611191 527 ntBASIC0.46□□□□□ -2.34
TCRBV3S1A0A5B6 AC084824.5-201ENST00000612009 413 ntBASIC0.46□□□□□ -2.34
TCRBV3S1A0A5B6 AC018926.1-201ENST00000616335 435 ntBASIC0.46□□□□□ -2.34
TCRBV3S1A0A5B6 RN7SL853P-201ENST00000617250 223 ntBASIC0.46□□□□□ -2.34
TCRBV3S1A0A5B6 AL357080.1-201ENST00000617394 239 ntBASIC0.46□□□□□ -2.34
TCRBV3S1A0A5B6 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.46□□□□□ -2.34
TCRBV3S1A0A5B6 AC093648.1-201ENST00000623546 606 ntBASIC0.46□□□□□ -2.34
TCRBV3S1A0A5B6 MTND5P35-201ENST00000557537 1720 ntBASIC0.46□□□□□ -2.34
TCRBV3S1A0A5B6 AC009541.1-201ENST00000438279 2662 ntBASIC0.45□□□□□ -2.34
TCRBV3S1A0A5B6 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
TCRBV3S1A0A5B6 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
TCRBV3S1A0A5B6 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.45□□□□□ -2.34
TCRBV3S1A0A5B6 RNU6-481P-201ENST00000384194 107 ntBASIC0.45□□□□□ -2.34
TCRBV3S1A0A5B6 RNU6-1207P-201ENST00000384343 107 ntBASIC0.45□□□□□ -2.34
TCRBV3S1A0A5B6 RNU6-160P-201ENST00000384591 107 ntBASIC0.45□□□□□ -2.34
TCRBV3S1A0A5B6 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms