Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 Y_RNA.422-201ENST00000384054 114 ntBASIC3.84□□□□□ -1.79
CCDC163A0A0D9SF12 SNORA48.8-201ENST00000391324 134 ntBASIC3.84□□□□□ -1.79
CCDC163A0A0D9SF12 AL591034.2-201ENST00000402839 359 ntBASIC3.84□□□□□ -1.79
CCDC163A0A0D9SF12 RNA5SP104-201ENST00000410989 118 ntBASIC3.84□□□□□ -1.79
CCDC163A0A0D9SF12 AC074117.2-201ENST00000417130 397 ntBASIC3.84□□□□□ -1.79
CCDC163A0A0D9SF12 MTND2P23-201ENST00000422990 651 ntBASIC3.84□□□□□ -1.79
CCDC163A0A0D9SF12 CYCSP4-201ENST00000429682 331 ntBASIC3.84□□□□□ -1.79
CCDC163A0A0D9SF12 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.84□□□□□ -1.79
CCDC163A0A0D9SF12 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.84□□□□□ -1.79
CCDC163A0A0D9SF12 RPL17P19-201ENST00000489069 552 ntBASIC3.84□□□□□ -1.79
CCDC163A0A0D9SF12 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.84□□□□□ -1.79
CCDC163A0A0D9SF12 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.84□□□□□ -1.79
CCDC163A0A0D9SF12 AC010265.1-201ENST00000513509 211 ntBASIC3.84□□□□□ -1.79
CCDC163A0A0D9SF12 ACA59.2-201ENST00000517061 156 ntBASIC3.84□□□□□ -1.79
CCDC163A0A0D9SF12 AC022634.1-201ENST00000520765 532 ntBASIC3.84□□□□□ -1.79
CCDC163A0A0D9SF12 AC011471.1-201ENST00000585766 187 ntBASIC3.84□□□□□ -1.79
CCDC163A0A0D9SF12 AC024581.2-201ENST00000619986 252 ntBASIC3.84□□□□□ -1.79
CCDC163A0A0D9SF12 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.84□□□□□ -1.8
CCDC163A0A0D9SF12 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
CCDC163A0A0D9SF12 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
CCDC163A0A0D9SF12 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
CCDC163A0A0D9SF12 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC163A0A0D9SF12 RNU6-799P-201ENST00000363567 107 ntBASIC3.83□□□□□ -1.8
CCDC163A0A0D9SF12 RNA5SP51-201ENST00000364750 119 ntBASIC3.83□□□□□ -1.8
CCDC163A0A0D9SF12 MIR544A-201ENST00000384855 91 ntBASIC3.83□□□□□ -1.8
CCDC163A0A0D9SF12 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.83□□□□□ -1.8
CCDC163A0A0D9SF12 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC163A0A0D9SF12 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC3.83□□□□□ -1.8
CCDC163A0A0D9SF12 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC163A0A0D9SF12 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC163A0A0D9SF12 RNU7-23P-201ENST00000459465 62 ntBASIC3.83□□□□□ -1.8
CCDC163A0A0D9SF12 RN7SL601P-201ENST00000471221 293 ntBASIC3.83□□□□□ -1.8
CCDC163A0A0D9SF12 MED28P2-201ENST00000475771 317 ntBASIC3.83□□□□□ -1.8
CCDC163A0A0D9SF12 AC105758.1-201ENST00000506038 399 ntBASIC3.83□□□□□ -1.8
CCDC163A0A0D9SF12 RNU5F-8P-201ENST00000515941 111 ntBASIC3.83□□□□□ -1.8
CCDC163A0A0D9SF12 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.83□□□□□ -1.8
CCDC163A0A0D9SF12 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC163A0A0D9SF12 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.83□□□□□ -1.8
CCDC163A0A0D9SF12 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.83□□□□□ -1.8
CCDC163A0A0D9SF12 CR383656.8-201ENST00000549046 145 ntBASIC3.83□□□□□ -1.8
CCDC163A0A0D9SF12 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC163A0A0D9SF12 AC009163.5-201ENST00000575421 637 ntBASIC3.83□□□□□ -1.8
CCDC163A0A0D9SF12 MIR3922-201ENST00000585192 84 ntBASIC3.83□□□□□ -1.8
CCDC163A0A0D9SF12 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.83□□□□□ -1.8
CCDC163A0A0D9SF12 AL158827.2-201ENST00000602494 330 ntBASIC3.83□□□□□ -1.8
CCDC163A0A0D9SF12 AC019159.1-201ENST00000605094 187 ntBASIC3.83□□□□□ -1.8
CCDC163A0A0D9SF12 AC099778.2-201ENST00000610904 211 ntBASIC3.83□□□□□ -1.8
CCDC163A0A0D9SF12 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC163A0A0D9SF12 AL691447.3-201ENST00000635020 330 ntBASIC3.83□□□□□ -1.8
CCDC163A0A0D9SF12 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.83□□□□□ -1.8
CCDC163A0A0D9SF12 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.83□□□□□ -1.8
CCDC163A0A0D9SF12 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC163A0A0D9SF12 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
CCDC163A0A0D9SF12 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.82□□□□□ -1.8
CCDC163A0A0D9SF12 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.82□□□□□ -1.8
CCDC163A0A0D9SF12 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC163A0A0D9SF12 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
CCDC163A0A0D9SF12 RNU6-639P-201ENST00000384074 107 ntBASIC3.82□□□□□ -1.8
CCDC163A0A0D9SF12 AL133475.1-201ENST00000404414 305 ntBASIC3.82□□□□□ -1.8
CCDC163A0A0D9SF12 MRPS18CP6-201ENST00000423587 223 ntBASIC3.82□□□□□ -1.8
CCDC163A0A0D9SF12 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC163A0A0D9SF12 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.82□□□□□ -1.8
CCDC163A0A0D9SF12 HMGB1P37-201ENST00000439613 609 ntBASIC3.82□□□□□ -1.8
CCDC163A0A0D9SF12 AC243964.1-201ENST00000441814 261 ntBASIC3.82□□□□□ -1.8
CCDC163A0A0D9SF12 RPS29P27-201ENST00000463711 170 ntBASIC3.82□□□□□ -1.8
CCDC163A0A0D9SF12 AC006483.1-201ENST00000487308 313 ntBASIC3.82□□□□□ -1.8
CCDC163A0A0D9SF12 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.82□□□□□ -1.8
CCDC163A0A0D9SF12 AC025445.1-201ENST00000502728 300 ntBASIC3.82□□□□□ -1.8
CCDC163A0A0D9SF12 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC163A0A0D9SF12 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.82□□□□□ -1.8
CCDC163A0A0D9SF12 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC163A0A0D9SF12 AC005000.2-201ENST00000605468 310 ntBASIC3.82□□□□□ -1.8
CCDC163A0A0D9SF12 AC005014.2-201ENST00000607795 599 ntBASIC3.82□□□□□ -1.8
CCDC163A0A0D9SF12 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC163A0A0D9SF12 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.82□□□□□ -1.8
CCDC163A0A0D9SF12 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
CCDC163A0A0D9SF12 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC163A0A0D9SF12 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC163A0A0D9SF12 UBE3AP2-201ENST00000429033 2259 ntBASIC3.82□□□□□ -1.8
CCDC163A0A0D9SF12 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC163A0A0D9SF12 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.82□□□□□ -1.8
CCDC163A0A0D9SF12 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC163A0A0D9SF12 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC163A0A0D9SF12 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
CCDC163A0A0D9SF12 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC163A0A0D9SF12 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC163A0A0D9SF12 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC163A0A0D9SF12 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.81□□□□□ -1.8
CCDC163A0A0D9SF12 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.81□□□□□ -1.8
CCDC163A0A0D9SF12 Y_RNA.364-201ENST00000365532 101 ntBASIC3.81□□□□□ -1.8
CCDC163A0A0D9SF12 RNU6-19P-201ENST00000384718 107 ntBASIC3.81□□□□□ -1.8
CCDC163A0A0D9SF12 MCFD2P1-201ENST00000417812 300 ntBASIC3.81□□□□□ -1.8
CCDC163A0A0D9SF12 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC163A0A0D9SF12 AC018865.2-201ENST00000423631 129 ntBASIC3.81□□□□□ -1.8
CCDC163A0A0D9SF12 AC008267.5-201ENST00000424928 265 ntBASIC3.81□□□□□ -1.8
CCDC163A0A0D9SF12 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC163A0A0D9SF12 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.81□□□□□ -1.8
CCDC163A0A0D9SF12 GSTA11P-201ENST00000452866 669 ntBASIC3.81□□□□□ -1.8
CCDC163A0A0D9SF12 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.81□□□□□ -1.8
CCDC163A0A0D9SF12 AC107626.1-201ENST00000471084 183 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms